EY702597 | Citrus Genome Database

Overview


Name	EY702597
Unique Name	EY702597
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	871

Libraries


Library Name	Type
Sweet orange fruit, development stadium (2 of 6)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY702597 vs. ExPASy Swiss-Prot
Match: UBIQ_NEUCR (Ubiquitin OS=Neurospora crassa GN=ubi-1 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.420e-29
Identity = 64/76 (84.21%), Postives = 67/76 (88.16%), Query Frame = 2

Query:  284 MQIFVKTLTGKTITLEVHSSDAVDNVKAKIQDKEGIPPDQQRLTFARKQLEDGRTLADYNLHKEVALHLVLPLRGG 511
            MQIFVKTLTGKTITLEV SSD +DNVK KIQDKEGIPPDQQRL FA KQLEDGRTL+DYN+ KE  LHLVL LRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 94.3597 bits (233), Expect = 1.732e-26
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 2

Query:  146 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 283
            QDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 46.595 bits (109), Expect = 1.732e-26
Identity = 23/23 (100.00%), Postives = 23/23 (100.00%), Query Frame = 1

Query:   55 MQIFVKTLTGKTITLEVESSDTI 123
            MQIFVKTLTGKTITLEVESSDTI
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTI 23

[Close]

BLAST of EY702597 vs. ExPASy Swiss-Prot
Match: UBIQ_TRYCR (Ubiquitin OS=Trypanosoma cruzi PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.773e-29
Identity = 64/76 (84.21%), Postives = 67/76 (88.16%), Query Frame = 2

Query:  284 MQIFVKTLTGKTITLEVHSSDAVDNVKAKIQDKEGIPPDQQRLTFARKQLEDGRTLADYNLHKEVALHLVLPLRGG 511
            MQIFVKTLTGKTI LEV SSD ++NVKAKIQDKEGIPPDQQRL FA KQLEDGRTLADYN+ KE  LHLVL LRGG
Sbjct:    1 MQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 95.5153 bits (236), Expect = 2.936e-26
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 2

Query:  146 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 283
            QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 44.669 bits (104), Expect = 2.936e-26
Identity = 22/23 (95.65%), Postives = 22/23 (95.65%), Query Frame = 1

Query:   55 MQIFVKTLTGKTITLEVESSDTI 123
            MQIFVKTLTGKTI LEVESSDTI
Sbjct:    1 MQIFVKTLTGKTIALEVESSDTI 23

[Close]

BLAST of EY702597 vs. ExPASy Swiss-Prot
Match: UBIQ_ACACA (Ubiquitin OS=Acanthamoeba castellanii PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.773e-29
Identity = 64/76 (84.21%), Postives = 67/76 (88.16%), Query Frame = 2

Query:  284 MQIFVKTLTGKTITLEVHSSDAVDNVKAKIQDKEGIPPDQQRLTFARKQLEDGRTLADYNLHKEVALHLVLPLRGG 511
            MQIFVKTLTGKTITLEV SSD ++NVK KIQDKEGIPPDQQRL FA KQLEDGRTLADYN+ KE  LHLVL LRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 95.5153 bits (236), Expect = 7.851e-27
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 2

Query:  146 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 283
            QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 46.595 bits (109), Expect = 7.851e-27
Identity = 23/23 (100.00%), Postives = 23/23 (100.00%), Query Frame = 1

Query:   55 MQIFVKTLTGKTITLEVESSDTI 123
            MQIFVKTLTGKTITLEVESSDTI
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTI 23

[Close]

BLAST of EY702597 vs. ExPASy Swiss-Prot
Match: UBIQ_GEOCY (Ubiquitin OS=Geodia cydonium PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.540e-29
Identity = 63/76 (82.89%), Postives = 68/76 (89.47%), Query Frame = 2

Query:  284 MQIFVKTLTGKTITLEVHSSDAVDNVKAKIQDKEGIPPDQQRLTFARKQLEDGRTLADYNLHKEVALHLVLPLRGG 511
            MQIFVKTLTGKTITLEV +SD ++NVKAKIQDKEGIPPDQQRL FA KQLEDGRTL+DYN+ KE  LHLVL LRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 94.3597 bits (233), Expect = 3.823e-26
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 2

Query:  146 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 283
            QDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 45.4394 bits (106), Expect = 3.823e-26
Identity = 22/23 (95.65%), Postives = 23/23 (100.00%), Query Frame = 1

Query:   55 MQIFVKTLTGKTITLEVESSDTI 123
            MQIFVKTLTGKTITLEVE+SDTI
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTI 23

[Close]

BLAST of EY702597 vs. ExPASy Swiss-Prot
Match: UBIQ_CAEEL (Ubiquitin OS=Caenorhabditis elegans GN=ubq-1 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.540e-29
Identity = 63/76 (82.89%), Postives = 68/76 (89.47%), Query Frame = 2

Query:  284 MQIFVKTLTGKTITLEVHSSDAVDNVKAKIQDKEGIPPDQQRLTFARKQLEDGRTLADYNLHKEVALHLVLPLRGG 511
            MQIFVKTLTGKTITLEV +SD ++NVKAKIQDKEGIPPDQQRL FA KQLEDGRTL+DYN+ KE  LHLVL LRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 94.3597 bits (233), Expect = 3.823e-26
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 2

Query:  146 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 283
            QDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 45.4394 bits (106), Expect = 3.823e-26
Identity = 22/23 (95.65%), Postives = 23/23 (100.00%), Query Frame = 1

Query:   55 MQIFVKTLTGKTITLEVESSDTI 123
            MQIFVKTLTGKTITLEVE+SDTI
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTI 23

[Close]

BLAST of EY702597 vs. ExPASy Swiss-Prot
Match: UBIQ_STRPU (Ubiquitin OS=Strongylocentrotus purpuratus PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.847e-29
Identity = 63/76 (82.89%), Postives = 68/76 (89.47%), Query Frame = 2

Query:  284 MQIFVKTLTGKTITLEVHSSDAVDNVKAKIQDKEGIPPDQQRLTFARKQLEDGRTLADYNLHKEVALHLVLPLRGG 511
            MQIFVKTLTGKTITLEV  SD+++NVKAKIQDKEGIPPDQQRL FA KQLEDGRTL+DYN+ KE  LHLVL LRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 94.3597 bits (233), Expect = 1.861e-25
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 2

Query:  146 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 283
            QDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 43.1282 bits (100), Expect = 1.861e-25
Identity = 21/23 (91.30%), Postives = 22/23 (95.65%), Query Frame = 1

Query:   55 MQIFVKTLTGKTITLEVESSDTI 123
            MQIFVKTLTGKTITLEVE SD+I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSI 23

[Close]

BLAST of EY702597 vs. ExPASy Swiss-Prot
Match: UBIQ_EUPEU (Ubiquitin OS=Euplotes eurystomus PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.847e-29
Identity = 63/76 (82.89%), Postives = 66/76 (86.84%), Query Frame = 2

Query:  284 MQIFVKTLTGKTITLEVHSSDAVDNVKAKIQDKEGIPPDQQRLTFARKQLEDGRTLADYNLHKEVALHLVLPLRGG 511
            MQIFVKTLTGKTITL+V  SD +DNVK KIQDKEGIPPDQQRL FA KQLEDGRTLADYN+ KE  LHLVL LRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 95.5153 bits (236), Expect = 4.977e-26
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 2

Query:  146 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 283
            QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 43.8986 bits (102), Expect = 4.977e-26
Identity = 21/23 (91.30%), Postives = 22/23 (95.65%), Query Frame = 1

Query:   55 MQIFVKTLTGKTITLEVESSDTI 123
            MQIFVKTLTGKTITL+VE SDTI
Sbjct:    1 MQIFVKTLTGKTITLDVEQSDTI 23

[Close]

BLAST of EY702597 vs. ExPASy Swiss-Prot
Match: UBIQ_ENCCU (Ubiquitin OS=Encephalitozoon cuniculi GN=ECU02_0740i PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.847e-29
Identity = 63/76 (82.89%), Postives = 68/76 (89.47%), Query Frame = 2

Query:  284 MQIFVKTLTGKTITLEVHSSDAVDNVKAKIQDKEGIPPDQQRLTFARKQLEDGRTLADYNLHKEVALHLVLPLRGG 511
            MQIFVKTLTGKTITLEV  SD+++NVKAKIQDKEGIPPDQQRL FA KQLEDGRTL+DYN+ KE  LHLVL LRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 94.3597 bits (233), Expect = 1.861e-25
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 2

Query:  146 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 283
            QDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 43.1282 bits (100), Expect = 1.861e-25
Identity = 21/23 (91.30%), Postives = 22/23 (95.65%), Query Frame = 1

Query:   55 MQIFVKTLTGKTITLEVESSDTI 123
            MQIFVKTLTGKTITLEVE SD+I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSI 23

[Close]

BLAST of EY702597 vs. ExPASy Swiss-Prot
Match: UBIQ_AGLNE (Ubiquitin OS=Aglaothamnion neglectum PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.847e-29
Identity = 63/76 (82.89%), Postives = 67/76 (88.16%), Query Frame = 2

Query:  284 MQIFVKTLTGKTITLEVHSSDAVDNVKAKIQDKEGIPPDQQRLTFARKQLEDGRTLADYNLHKEVALHLVLPLRGG 511
            MQIFVKTLTGKTITLEV SSD ++NVK KIQDKEGIPPDQQRL FA KQLEDGRTL+DYN+ KE  LHLVL LRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 94.3597 bits (233), Expect = 1.732e-26
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 2

Query:  146 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 283
            QDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 46.595 bits (109), Expect = 1.732e-26
Identity = 23/23 (100.00%), Postives = 23/23 (100.00%), Query Frame = 1

Query:   55 MQIFVKTLTGKTITLEVESSDTI 123
            MQIFVKTLTGKTITLEVESSDTI
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTI 23

[Close]

BLAST of EY702597 vs. ExPASy Swiss-Prot
Match: UBIQ_XENLA (Ubiquitin OS=Xenopus laevis PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.286e-28
Identity = 63/76 (82.89%), Postives = 67/76 (88.16%), Query Frame = 2

Query:  284 MQIFVKTLTGKTITLEVHSSDAVDNVKAKIQDKEGIPPDQQRLTFARKQLEDGRTLADYNLHKEVALHLVLPLRGG 511
            MQIFVKTLTGKTITLEV  SD ++NVKAKIQDKEGIPPDQQRL FA KQLEDGRTL+DYN+ KE  LHLVL LRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 94.3597 bits (233), Expect = 6.479e-26
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 2

Query:  146 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 283
            QDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 44.669 bits (104), Expect = 6.479e-26
Identity = 22/23 (95.65%), Postives = 22/23 (95.65%), Query Frame = 1

Query:   55 MQIFVKTLTGKTITLEVESSDTI 123
            MQIFVKTLTGKTITLEVE SDTI
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTI 23

The following BLAST results are available for this feature:

BLAST of EY702597 vs. ExPASy Swiss-Prot

BLAST of EY702597 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93


Match Name	E-value	Identity	Description
UBIQ_NEUCR	4.420e-29	84.21	Ubiquitin OS=Neurospora crassa GN=ubi-1 PE=1 SV=1	[more]
UBIQ_TRYCR	5.773e-29	84.21	Ubiquitin OS=Trypanosoma cruzi PE=3 SV=1	[more]
UBIQ_ACACA	5.773e-29	84.21	Ubiquitin OS=Acanthamoeba castellanii PE=3 SV=1	[more]
UBIQ_GEOCY	7.540e-29	82.89	Ubiquitin OS=Geodia cydonium PE=3 SV=1	[more]
UBIQ_CAEEL	7.540e-29	82.89	Ubiquitin OS=Caenorhabditis elegans GN=ubq-1 PE=1 ...	[more]
UBIQ_STRPU	9.847e-29	82.89	Ubiquitin OS=Strongylocentrotus purpuratus PE=3 SV...	[more]
UBIQ_EUPEU	9.847e-29	82.89	Ubiquitin OS=Euplotes eurystomus PE=3 SV=1	[more]
UBIQ_ENCCU	9.847e-29	82.89	Ubiquitin OS=Encephalitozoon cuniculi GN=ECU02_074...	[more]
UBIQ_AGLNE	9.847e-29	82.89	Ubiquitin OS=Aglaothamnion neglectum PE=3 SV=1	[more]
UBIQ_XENLA	1.286e-28	82.89	Ubiquitin OS=Xenopus laevis PE=1 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C3-701-009-H06-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY702597 ID=EY702597; Name=EY702597; organism=Citrus sinensis; type=EST; length=871bp
CCACGCGTCCGGAAGGAGTCATCCCTTCATCTCGTCCTCAGGCTCCGTGG
TGGTATGCAGATCTTCGTCAAAACCCTAACTGGGAAGACGATCACTCTGG
AGGTGGAGAGTTCGGATACGATTGATAGGCGGGGGGGGCAGGATCCAGGA
CAAAGAGGGGATCCCGCCGGACCAGCAAAGATTGATCTTCGCCGGTAAGC
AGTTGGAAGATGGCCGCACCTTGGCCGATTACAACATTCAGAAAGAGTCA
ACTCTCCACCTTGTTCTTCGTCTCAGGGGAGGCATGCAGATATTTGTTAA
GACCCTTACTGGGAAAACAATTACTTTGGAAGTTCATAGCTCAGACGCGG
TTGACAATGTCAAGGCAAAAATCCAAGATAAGGAAGGAATTCCACCGGAT
CAGCAGCGTTTGACCTTCGCTCGCAAACAGCTTGAGGATGGAAGGACTCT
TGCGGATTATAACCTCCACAAGGAGGTCGCCCTTCATCTGGTTCTGCCCC
TGAGGGGGGGTATGCAGATACTTGTCAAGACCCTTGACTGGGAAGACTAT
TACTCTGGAGGTGGAGAGCTCCGATACTATTGATAATGTTAAGGCAAAGA
TTCAGGACAACGAAGGGCATTCCCCCAGATCCAGAAAGGCTCATCTTTCC
TGGAAACCACCTTGAAGGAGGGCCGTCTTTACCTGATTATCACTTTCCCA
AGGGGCCCCCCCTCCCTCTTCGGGCTCCCCCTTCTTGGGGGTGAATTCCT
AAAAGGGTATCTCCCTTGGCCGCCGGGCCGCCTCCCCCCCGCCTGCACCC
AAAAATCTATTTTCCCTGCGGGCGCCCCCCGTCCTCTTCCAACTCTTTGC
CCCAAGCTTTACCGCGCAAAC