EY702597 | Citrus Genome Database

Overview


Name	EY702597
Unique Name	EY702597
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	871

Libraries


Library Name	Type
Sweet orange fruit, development stadium (2 of 6)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY702597 vs. ExPASy Swiss-Prot
Match: UBIQ_CAVPO (Ubiquitin OS=Cavia porcellus GN=RPS27A PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.286e-28
Identity = 63/76 (82.89%), Postives = 67/76 (88.16%), Query Frame = 2

Query:  284 MQIFVKTLTGKTITLEVHSSDAVDNVKAKIQDKEGIPPDQQRLTFARKQLEDGRTLADYNLHKEVALHLVLPLRGG 511
            MQIFVKTLTGKTITLEV  SD ++NVKAKIQDKEGIPPDQQRL FA KQLEDGRTL+DYN+ KE  LHLVL LRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 94.3597 bits (233), Expect = 6.479e-26
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 2

Query:  146 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 283
            QDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 44.669 bits (104), Expect = 6.479e-26
Identity = 22/23 (95.65%), Postives = 22/23 (95.65%), Query Frame = 1

Query:   55 MQIFVKTLTGKTITLEVESSDTI 123
            MQIFVKTLTGKTITLEVE SDTI
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTI 23

[Close]

BLAST of EY702597 vs. ExPASy Swiss-Prot
Match: UBIQ_CANFA (Ubiquitin OS=Canis familiaris GN=UBA52 PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.286e-28
Identity = 63/76 (82.89%), Postives = 67/76 (88.16%), Query Frame = 2

Query:  284 MQIFVKTLTGKTITLEVHSSDAVDNVKAKIQDKEGIPPDQQRLTFARKQLEDGRTLADYNLHKEVALHLVLPLRGG 511
            MQIFVKTLTGKTITLEV  SD ++NVKAKIQDKEGIPPDQQRL FA KQLEDGRTL+DYN+ KE  LHLVL LRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 94.3597 bits (233), Expect = 6.479e-26
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 2

Query:  146 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 283
            QDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 44.669 bits (104), Expect = 6.479e-26
Identity = 22/23 (95.65%), Postives = 22/23 (95.65%), Query Frame = 1

Query:   55 MQIFVKTLTGKTITLEVESSDTI 123
            MQIFVKTLTGKTITLEVE SDTI
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTI 23

[Close]

BLAST of EY702597 vs. ExPASy Swiss-Prot
Match: UBIQ_CAMDR (Ubiquitin OS=Camelus dromedarius PE=3 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 1.286e-28
Identity = 63/76 (82.89%), Postives = 67/76 (88.16%), Query Frame = 2

Query:  284 MQIFVKTLTGKTITLEVHSSDAVDNVKAKIQDKEGIPPDQQRLTFARKQLEDGRTLADYNLHKEVALHLVLPLRGG 511
            MQIFVKTLTGKTITLEV  SD ++NVKAKIQDKEGIPPDQQRL FA KQLEDGRTL+DYN+ KE  LHLVL LRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 94.3597 bits (233), Expect = 6.479e-26
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 2

Query:  146 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 283
            QDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 44.669 bits (104), Expect = 6.479e-26
Identity = 22/23 (95.65%), Postives = 22/23 (95.65%), Query Frame = 1

Query:   55 MQIFVKTLTGKTITLEVESSDTI 123
            MQIFVKTLTGKTITLEVE SDTI
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTI 23

[Close]

BLAST of EY702597 vs. ExPASy Swiss-Prot
Match: UBIQ_BOVIN (Ubiquitin OS=Bos taurus GN=RPS27A PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.286e-28
Identity = 63/76 (82.89%), Postives = 67/76 (88.16%), Query Frame = 2

Query:  284 MQIFVKTLTGKTITLEVHSSDAVDNVKAKIQDKEGIPPDQQRLTFARKQLEDGRTLADYNLHKEVALHLVLPLRGG 511
            MQIFVKTLTGKTITLEV  SD ++NVKAKIQDKEGIPPDQQRL FA KQLEDGRTL+DYN+ KE  LHLVL LRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 94.3597 bits (233), Expect = 6.479e-26
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 2

Query:  146 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 283
            QDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 44.669 bits (104), Expect = 6.479e-26
Identity = 22/23 (95.65%), Postives = 22/23 (95.65%), Query Frame = 1

Query:   55 MQIFVKTLTGKTITLEVESSDTI 123
            MQIFVKTLTGKTITLEVE SDTI
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTI 23

[Close]

BLAST of EY702597 vs. ExPASy Swiss-Prot
Match: UBIQ_TETPY (Ubiquitin OS=Tetrahymena pyriformis GN=TUF11 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.680e-28
Identity = 62/76 (81.58%), Postives = 68/76 (89.47%), Query Frame = 2

Query:  284 MQIFVKTLTGKTITLEVHSSDAVDNVKAKIQDKEGIPPDQQRLTFARKQLEDGRTLADYNLHKEVALHLVLPLRGG 511
            MQIFVKTLTGKTITL+V +SD ++NVKAKIQDKEGIPPDQQRL FA KQLEDGRTL+DYN+ KE  LHLVL LRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 94.3597 bits (233), Expect = 8.434e-26
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 2

Query:  146 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 283
            QDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 44.2838 bits (103), Expect = 8.434e-26
Identity = 21/23 (91.30%), Postives = 23/23 (100.00%), Query Frame = 1

Query:   55 MQIFVKTLTGKTITLEVESSDTI 123
            MQIFVKTLTGKTITL+VE+SDTI
Sbjct:    1 MQIFVKTLTGKTITLDVEASDTI 23

[Close]

BLAST of EY702597 vs. ExPASy Swiss-Prot
Match: UBIQ_DICDI (Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.680e-28
Identity = 63/76 (82.89%), Postives = 67/76 (88.16%), Query Frame = 2

Query:  284 MQIFVKTLTGKTITLEVHSSDAVDNVKAKIQDKEGIPPDQQRLTFARKQLEDGRTLADYNLHKEVALHLVLPLRGG 511
            MQIFVKTLTGKTITLEV  SD ++NVKAKIQDKEGIPPDQQRL FA KQLEDGRTL+DYN+ KE  LHLVL LRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 94.3597 bits (233), Expect = 1.861e-25
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 2

Query:  146 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 283
            QDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 43.1282 bits (100), Expect = 1.861e-25
Identity = 21/23 (91.30%), Postives = 21/23 (91.30%), Query Frame = 1

Query:   55 MQIFVKTLTGKTITLEVESSDTI 123
            MQIFVKTLTGKTITLEVE SD I
Sbjct:    1 MQIFVKTLTGKTITLEVEGSDNI 23

[Close]

BLAST of EY702597 vs. ExPASy Swiss-Prot
Match: UBIQ_SHEEP (Ubiquitin OS=Ovis aries GN=UBA52 PE=3 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 2.194e-28
Identity = 62/76 (81.58%), Postives = 67/76 (88.16%), Query Frame = 2

Query:  284 MQIFVKTLTGKTITLEVHSSDAVDNVKAKIQDKEGIPPDQQRLTFARKQLEDGRTLADYNLHKEVALHLVLPLRGG 511
            MQIFVKTLTGKTITLEV  SD ++NVKAKIQDKEGIPPDQQRL FA KQLEDGRTL+DYN+ KE  LHLVL +RGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRMRGG 76

HSP 2 Score: 93.5893 bits (231), Expect = 1.098e-25
Identity = 44/46 (95.65%), Postives = 46/46 (100.00%), Query Frame = 2

Query:  146 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 283
            QDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR+RGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRMRGG 76

HSP 3 Score: 44.669 bits (104), Expect = 1.098e-25
Identity = 22/23 (95.65%), Postives = 22/23 (95.65%), Query Frame = 1

Query:   55 MQIFVKTLTGKTITLEVESSDTI 123
            MQIFVKTLTGKTITLEVE SDTI
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTI 23

[Close]

BLAST of EY702597 vs. ExPASy Swiss-Prot
Match: UBIQ_PHYIN (Ubiquitin OS=Phytophthora infestans PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.865e-28
Identity = 62/76 (81.58%), Postives = 67/76 (88.16%), Query Frame = 2

Query:  284 MQIFVKTLTGKTITLEVHSSDAVDNVKAKIQDKEGIPPDQQRLTFARKQLEDGRTLADYNLHKEVALHLVLPLRGG 511
            MQIFVKTLTGKTITL+V  SD++DNVK KIQDKEGIPPDQQRL FA KQLEDGRTL+DYN+ KE  LHLVL LRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 94.3597 bits (233), Expect = 4.105e-25
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 2

Query:  146 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 283
            QDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 41.9726 bits (97), Expect = 4.105e-25
Identity = 20/23 (86.96%), Postives = 22/23 (95.65%), Query Frame = 1

Query:   55 MQIFVKTLTGKTITLEVESSDTI 123
            MQIFVKTLTGKTITL+VE SD+I
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDSI 23

[Close]

BLAST of EY702597 vs. ExPASy Swiss-Prot
Match: UBIQ_EIMBO (Ubiquitin OS=Eimeria bovis PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.865e-28
Identity = 62/76 (81.58%), Postives = 67/76 (88.16%), Query Frame = 2

Query:  284 MQIFVKTLTGKTITLEVHSSDAVDNVKAKIQDKEGIPPDQQRLTFARKQLEDGRTLADYNLHKEVALHLVLPLRGG 511
            MQIFVKTLTGKTITL+V  SD ++NVKAKIQDKEGIPPDQQRL FA KQLEDGRTL+DYN+ KE  LHLVL LRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 94.3597 bits (233), Expect = 1.429e-25
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 2

Query:  146 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 283
            QDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 43.5134 bits (101), Expect = 1.429e-25
Identity = 21/23 (91.30%), Postives = 22/23 (95.65%), Query Frame = 1

Query:   55 MQIFVKTLTGKTITLEVESSDTI 123
            MQIFVKTLTGKTITL+VE SDTI
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTI 23

[Close]

BLAST of EY702597 vs. ExPASy Swiss-Prot
Match: UBIQ_TRYBB (Ubiquitin OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.742e-28
Identity = 62/76 (81.58%), Postives = 67/76 (88.16%), Query Frame = 2

Query:  284 MQIFVKTLTGKTITLEVHSSDAVDNVKAKIQDKEGIPPDQQRLTFARKQLEDGRTLADYNLHKEVALHLVLPLRGG 511
            MQIFVKTLTGKTI LEV +SD ++NVKAKIQDKEGIPPDQQRL FA KQLE+GRTLADYN+ KE  LHLVL LRGG
Sbjct:    1 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 93.9745 bits (232), Expect = 1.861e-25
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 2

Query:  146 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 283
            QDKEGIPPDQQRLIFAGKQLE+GRTLADYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 43.5134 bits (101), Expect = 1.861e-25
Identity = 21/23 (91.30%), Postives = 22/23 (95.65%), Query Frame = 1

Query:   55 MQIFVKTLTGKTITLEVESSDTI 123
            MQIFVKTLTGKTI LEVE+SDTI
Sbjct:    1 MQIFVKTLTGKTIALEVEASDTI 23

The following BLAST results are available for this feature:

BLAST of EY702597 vs. ExPASy Swiss-Prot

BLAST of EY702597 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93


Match Name	E-value	Identity	Description
UBIQ_CAVPO	1.286e-28	82.89	Ubiquitin OS=Cavia porcellus GN=RPS27A PE=3 SV=1	[more]
UBIQ_CANFA	1.286e-28	82.89	Ubiquitin OS=Canis familiaris GN=UBA52 PE=3 SV=1	[more]
UBIQ_CAMDR	1.286e-28	82.89	Ubiquitin OS=Camelus dromedarius PE=3 SV=2	[more]
UBIQ_BOVIN	1.286e-28	82.89	Ubiquitin OS=Bos taurus GN=RPS27A PE=1 SV=1	[more]
UBIQ_TETPY	1.680e-28	81.58	Ubiquitin OS=Tetrahymena pyriformis GN=TUF11 PE=3 ...	[more]
UBIQ_DICDI	1.680e-28	82.89	Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1...	[more]
UBIQ_SHEEP	2.194e-28	81.58	Ubiquitin OS=Ovis aries GN=UBA52 PE=3 SV=2	[more]
UBIQ_PHYIN	2.865e-28	81.58	Ubiquitin OS=Phytophthora infestans PE=1 SV=1	[more]
UBIQ_EIMBO	2.865e-28	81.58	Ubiquitin OS=Eimeria bovis PE=2 SV=1	[more]
UBIQ_TRYBB	3.742e-28	81.58	Ubiquitin OS=Trypanosoma brucei brucei PE=3 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C3-701-009-H06-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY702597 ID=EY702597; Name=EY702597; organism=Citrus sinensis; type=EST; length=871bp
CCACGCGTCCGGAAGGAGTCATCCCTTCATCTCGTCCTCAGGCTCCGTGG
TGGTATGCAGATCTTCGTCAAAACCCTAACTGGGAAGACGATCACTCTGG
AGGTGGAGAGTTCGGATACGATTGATAGGCGGGGGGGGCAGGATCCAGGA
CAAAGAGGGGATCCCGCCGGACCAGCAAAGATTGATCTTCGCCGGTAAGC
AGTTGGAAGATGGCCGCACCTTGGCCGATTACAACATTCAGAAAGAGTCA
ACTCTCCACCTTGTTCTTCGTCTCAGGGGAGGCATGCAGATATTTGTTAA
GACCCTTACTGGGAAAACAATTACTTTGGAAGTTCATAGCTCAGACGCGG
TTGACAATGTCAAGGCAAAAATCCAAGATAAGGAAGGAATTCCACCGGAT
CAGCAGCGTTTGACCTTCGCTCGCAAACAGCTTGAGGATGGAAGGACTCT
TGCGGATTATAACCTCCACAAGGAGGTCGCCCTTCATCTGGTTCTGCCCC
TGAGGGGGGGTATGCAGATACTTGTCAAGACCCTTGACTGGGAAGACTAT
TACTCTGGAGGTGGAGAGCTCCGATACTATTGATAATGTTAAGGCAAAGA
TTCAGGACAACGAAGGGCATTCCCCCAGATCCAGAAAGGCTCATCTTTCC
TGGAAACCACCTTGAAGGAGGGCCGTCTTTACCTGATTATCACTTTCCCA
AGGGGCCCCCCCTCCCTCTTCGGGCTCCCCCTTCTTGGGGGTGAATTCCT
AAAAGGGTATCTCCCTTGGCCGCCGGGCCGCCTCCCCCCCGCCTGCACCC
AAAAATCTATTTTCCCTGCGGGCGCCCCCCGTCCTCTTCCAACTCTTTGC
CCCAAGCTTTACCGCGCAAAC