EY702591
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS1_AMAHP (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Amaranthus hypochondriacus GN=RBCS1 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 7.096e-40 Identity = 68/115 (59.13%), Postives = 82/115 (71.30%), Query Frame = 3 Query: 180 TKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524 TKK++ND +S+ SNGGR+QCM+VWPP G KK ET SYLPPL+D LL ++ YLL GWIPC EF+LE +V RE+ SP Y DGRYWT K +YG TD A LN V E + YP Sbjct: 40 TKKSSNDFSSLPSNGGRVQCMQVWPPVGKKKFETLSYLPPLSDAQLLAQVQYLLNKGWIPCIEFELEHPFVYRENHRSPGYQDGRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYP 154 HSP 2 Score: 40.0466 bits (92), Expect = 7.096e-40 Identity = 20/33 (60.61%), Postives = 25/33 (75.76%), Query Frame = 1 Query: 61 LASSMISSTTVATANRASLAQASMVAPFTGLKS 159 +ASSM+S+ +AT + AQASMVAPF GLKS Sbjct: 1 MASSMLSNAAMATTAATAGAQASMVAPFNGLKS 33
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS2_SPIOL (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Spinacia oleracea GN=RBCS2 PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 9.250e-40 Identity = 64/118 (54.24%), Postives = 83/118 (70.34%), Query Frame = 3 Query: 171 GAGTKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524 G K N+DITS+ASNGGR+QCMKVWP +K+ ET SYLPPL + L +++ YLL + W+PC EF+ + G+V REH +SP YYDGRYWT K ++G TD A LN + E +EYP Sbjct: 35 GFPATKKNDDITSLASNGGRVQCMKVWPTQNMKRYETLSYLPPLTTDQLARQVDYLLNNKWVPCLEFETDHGFVYREHHNSPGYYDGRYWTMWKLPMFGCTDPAQVLNELEECKKEYP 152 HSP 2 Score: 44.2838 bits (103), Expect = 9.250e-40 Identity = 24/36 (66.67%), Postives = 29/36 (80.56%), Query Frame = 1 Query: 61 LASSMISSTTVATANRASLAQASMVAPFTGLKSSSG 168 +ASS++SS VAT +R AQASMVAPFTGLKS+ G Sbjct: 1 MASSVLSSAAVATVSRTP-AQASMVAPFTGLKSTVG 35
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS4_MESCR (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-4 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.205e-39 Identity = 65/113 (57.52%), Postives = 86/113 (76.11%), Query Frame = 3 Query: 186 KTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524 + NNDITS+ASNGGR+QCM+VWPP G+KK ET SYLPPL++E+LLKE+ YLL +GW+PC EF+ G+V REH ++P YYDGRYWT K ++G TD + + + E + YP Sbjct: 41 RKNNDITSVASNGGRVQCMQVWPPLGMKKFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYP 153 HSP 2 Score: 36.5798 bits (83), Expect = 1.205e-39 Identity = 18/35 (51.43%), Postives = 24/35 (68.57%), Query Frame = 1 Query: 61 LASSMISSTTVATANRASLAQASMVAPFTGLKSSS 165 +ASS++S+ A + AQA+MVAPF GLKS S Sbjct: 1 MASSLMSNAATTMAAATTTAQANMVAPFNGLKSIS 35
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS_TOBAC (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Nicotiana tabacum GN=RBCS PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.205e-39 Identity = 67/115 (58.26%), Postives = 82/115 (71.30%), Query Frame = 3 Query: 180 TKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524 ++K N DITSIASNGGR+QCM+VWPP KK ET SYLP L+ E LL E+ YLL++GW+PC EF+ E G+V RE+ SP YYDGRYWT K ++G TDA L V E + YP Sbjct: 38 SRKQNLDITSIASNGGRVQCMQVWPPINKKKYETLSYLPDLSQEQLLSEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYP 152 HSP 2 Score: 42.743 bits (99), Expect = 1.205e-39 Identity = 22/35 (62.86%), Postives = 31/35 (88.57%), Query Frame = 1 Query: 61 LASSMISSTTVATANRASLAQASMVAPFTGLKSSS 165 +ASS++SS VAT R+++AQA+MVAPFTGLKS++ Sbjct: 1 MASSVLSSAAVAT--RSNVAQANMVAPFTGLKSAA 33
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS1_NICSY (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Nicotiana sylvestris GN=RBCS PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.205e-39 Identity = 67/115 (58.26%), Postives = 82/115 (71.30%), Query Frame = 3 Query: 180 TKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524 ++K N DITSIASNGGR+QCM+VWPP KK ET SYLP L+ E LL E+ YLL++GW+PC EF+ E G+V RE+ SP YYDGRYWT K ++G TDA L V E + YP Sbjct: 38 SRKQNLDITSIASNGGRVQCMQVWPPINKKKYETLSYLPDLSQEQLLSEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYP 152 HSP 2 Score: 42.743 bits (99), Expect = 1.205e-39 Identity = 22/35 (62.86%), Postives = 31/35 (88.57%), Query Frame = 1 Query: 61 LASSMISSTTVATANRASLAQASMVAPFTGLKSSS 165 +ASS++SS VAT R+++AQA+MVAPFTGLKS++ Sbjct: 1 MASSVLSSAAVAT--RSNVAQANMVAPFTGLKSAA 33
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS1_SOLTU (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Solanum tuberosum GN=RBCS-1 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 3.473e-39 Identity = 68/115 (59.13%), Postives = 85/115 (73.91%), Query Frame = 3 Query: 180 TKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524 ++K N DITSIASNGGR++CM+VWPP +KK ET SYLP L DE LLKE+ YLL++GW+PC EF+ E G+V RE+ SP YYDGRYWT K ++G TDA L V+E + YP Sbjct: 39 SRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLTDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQECKKSYP 153 HSP 2 Score: 37.7354 bits (86), Expect = 3.473e-39 Identity = 22/36 (61.11%), Postives = 29/36 (80.56%), Query Frame = 1 Query: 61 LASSMISSTTVATANRASLAQA-SMVAPFTGLKSSS 165 +ASS+ISS VAT R ++ QA SM+APFTGLKS++ Sbjct: 1 MASSVISSAAVAT--RTNVTQAGSMIAPFTGLKSAA 34
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS3_MESCR (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-3 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 5.893e-39 Identity = 64/113 (56.64%), Postives = 85/113 (75.22%), Query Frame = 3 Query: 186 KTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524 + NNDITS+ASNGGR+QCM+VWPP G KK ET SYLPPL++E+L+KE+ YLL +GW+PC EF+ G+V REH ++P YYDGRYWT K ++G TD + + + E + YP Sbjct: 41 RKNNDITSVASNGGRVQCMQVWPPLGKKKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYP 153 HSP 2 Score: 36.5798 bits (83), Expect = 5.893e-39 Identity = 18/35 (51.43%), Postives = 24/35 (68.57%), Query Frame = 1 Query: 61 LASSMISSTTVATANRASLAQASMVAPFTGLKSSS 165 +ASS++S+ A + AQA+MVAPF GLKS S Sbjct: 1 MASSLMSNAATTMAAATTTAQANMVAPFNGLKSVS 35
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS2_AMAHP (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Amaranthus hypochondriacus GN=RBCS2 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.000e-38 Identity = 69/113 (61.06%), Postives = 81/113 (71.68%), Query Frame = 3 Query: 186 KTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524 + +NDITSIASNGGR+QCM+VWPP G KK ET SYLPPL+D LL ++ YLL GWIPC EF+LE +V RE+ SP Y DGRYWT K +YG TD A LN V E + YP Sbjct: 43 RKSNDITSIASNGGRVQCMQVWPPVGKKKFETLSYLPPLSDAQLLAQVQYLLNKGWIPCIEFELEHPFVYRENHRSPGYQDGRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYP 155 HSP 2 Score: 36.1946 bits (82), Expect = 1.000e-38 Identity = 21/35 (60.00%), Postives = 26/35 (74.29%), Query Frame = 1 Query: 61 LASSMISS--TTVATANRASLAQASMVAPFTGLKS 159 +ASSM+S+ T VA A + AQA+MVAPF GLKS Sbjct: 1 MASSMMSNAATAVAVAATSGGAQANMVAPFNGLKS 35
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS2_MESCR (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-2 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.213e-38 Identity = 65/113 (57.52%), Postives = 85/113 (75.22%), Query Frame = 3 Query: 186 KTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524 K +NDITSIASNGGR+QCM+VWPP G KK ET SYLPPL++E+L+KE+ YLL +GW+PC EF+ G+V REH ++P YYDGRYWT K ++G TD + + + E + YP Sbjct: 38 KKSNDITSIASNGGRVQCMQVWPPLGKKKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYP 150 HSP 2 Score: 35.039 bits (79), Expect = 2.213e-38 Identity = 20/33 (60.61%), Postives = 24/33 (72.73%), Query Frame = 1 Query: 67 SSMISSTTVATANRASLAQASMVAPFTGLKSSS 165 +SM+S+ V R + AQASMVAPFTGLKS S Sbjct: 2 ASMMSNAAVV--GRTTPAQASMVAPFTGLKSVS 32
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS2_NICSY (Ribulose bisphosphate carboxylase small chain S41, chloroplastic OS=Nicotiana sylvestris PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.213e-38 Identity = 67/115 (58.26%), Postives = 84/115 (73.04%), Query Frame = 3 Query: 180 TKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524 ++K N DITSIASNGGR+QCM+VWPP KK ET SYLP L++E LL+E+ YLL++GW+PC EF+ E G+V RE+ SP YYDGRYWT K ++G TDA L V E + YP Sbjct: 39 SRKQNLDITSIASNGGRVQCMQVWPPINKKKYETLSYLPDLSEEQLLREVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYP 153 HSP 2 Score: 36.965 bits (84), Expect = 2.213e-38 Identity = 17/31 (54.84%), Postives = 23/31 (74.19%), Query Frame = 1 Query: 73 MISSTTVATANRASLAQASMVAPFTGLKSSS 165 +I S+ A A + AQASM+APFTGLKS++ Sbjct: 4 LIMSSAAAVATGTNAAQASMIAPFTGLKSAT 34 The following BLAST results are available for this feature:
BLAST of EY702591 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 104
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Sequences
The
following sequences are available for this feature:
EST sequence >EY702591 ID=EY702591; Name=EY702591; organism=Citrus sinensis; type=EST; length=963bpback to top |