EY702591
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS7_FLAPR (Ribulose bisphosphate carboxylase small chain 7, chloroplastic OS=Flaveria pringlei GN=RBCS7 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 1.647e-35 Identity = 65/115 (56.52%), Postives = 84/115 (73.04%), Query Frame = 3 Query: 180 TKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524 TKK N D +++ASNGGR+QCMKVWPP G K+ ET SYLP L + L KE+ YLLR+ W+PC EF+LE G+V RE+ SP YYDGRYWT K ++G TD+A + ++E +EYP Sbjct: 32 TKKVN-DFSTLASNGGRVQCMKVWPPLGKKRYETLSYLPNLTEVQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYP 145 HSP 2 Score: 32.7278 bits (73), Expect = 1.647e-35 Identity = 15/22 (68.18%), Postives = 20/22 (90.91%), Query Frame = 1 Query: 100 ANRASLAQASMVAPFTGLKSSS 165 A A++AQA+MVAPFTGLKS++ Sbjct: 6 ATVATVAQANMVAPFTGLKSNA 27
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS_SILPR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Silene pratensis GN=RBCS PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 3.639e-35 Identity = 64/115 (55.65%), Postives = 81/115 (70.43%), Query Frame = 3 Query: 180 TKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524 ++K+N DITS+A+NGGR+ CM+VWPP LKK ET SYLP L++E+LLKEI YLL GW+PC EF++ V RE+ SP YYDGRYWT K ++G TDA+ V E YP Sbjct: 37 SRKSNVDITSLATNGGRVNCMQVWPPRNLKKFETLSYLPTLSEESLLKEINYLLIKGWVPCLEFEVGPAHVYRENNKSPGYYDGRYWTMWKLPMFGCTDASQVAAEVVECKNAYP 151 HSP 2 Score: 36.1946 bits (82), Expect = 3.639e-35 Identity = 19/33 (57.58%), Postives = 27/33 (81.82%), Query Frame = 1 Query: 67 SSMISSTTVATANRASLAQASMVAPFTGLKSSS 165 +S++S+ V TA+ A AQA+MVAPF+GLKS+S Sbjct: 2 ASLMSNAAVVTASTA--AQANMVAPFSGLKSTS 32
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS3_FLAPR (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Flaveria pringlei GN=RBCS3 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 3.641e-35 Identity = 64/115 (55.65%), Postives = 83/115 (72.17%), Query Frame = 3 Query: 180 TKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524 TKK N D +++ SNGGR+QCMKVWPP G K+ ET SYLP L + L KE+ YLLR+ W+PC EF+LE G+V RE+ SP YYDGRYWT K ++G TD+A + ++E +EYP Sbjct: 32 TKKVN-DFSTLPSNGGRVQCMKVWPPLGKKRYETLSYLPNLTESQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYP 145 HSP 2 Score: 32.7278 bits (73), Expect = 3.641e-35 Identity = 15/22 (68.18%), Postives = 20/22 (90.91%), Query Frame = 1 Query: 100 ANRASLAQASMVAPFTGLKSSS 165 A A++AQA+MVAPFTGLKS++ Sbjct: 6 ATVATVAQANMVAPFTGLKSNA 27
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS2_LEMGI (Ribulose bisphosphate carboxylase small chain SSU26, chloroplastic OS=Lemna gibba GN=SSU26 PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 4.741e-35 Identity = 62/117 (52.99%), Postives = 83/117 (70.94%), Query Frame = 3 Query: 180 TKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYPPH 530 T+K N +++++ SNGG++ CM+VWPP GLKK ET SYLPPL+ E L KE+ YLLR+ W+PC EF E G+V RE+ SP YYDGRYWT K ++G TDA+ + V E + YP + Sbjct: 38 TRKANKNLSTLPSNGGKVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKE-GFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEY 153 HSP 2 Score: 36.1946 bits (82), Expect = 4.741e-35 Identity = 20/34 (58.82%), Postives = 26/34 (76.47%), Query Frame = 1 Query: 61 LASSMISSTTVATANRASLAQASMVAPFTGLKSS 162 +ASSM++ST A RA AQ++MVAPF GL+SS Sbjct: 1 MASSMMAST--AAVARAGPAQSNMVAPFNGLRSS 32
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS1_FLAPR (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Flaveria pringlei GN=RBCS1 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.743e-35 Identity = 65/115 (56.52%), Postives = 83/115 (72.17%), Query Frame = 3 Query: 180 TKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524 TKK N D +++ SNGGR+QCMKVWPP G KK ET SYLP L + L KE+ YLLR+ W+PC EF+LE G+V RE+ SP YYDGRYWT K ++G TD+A + ++E +EYP Sbjct: 32 TKKVN-DFSTLPSNGGRVQCMKVWPPLGKKKYETLSYLPDLTEVQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYP 145 HSP 2 Score: 31.5722 bits (70), Expect = 4.743e-35 Identity = 14/22 (63.64%), Postives = 20/22 (90.91%), Query Frame = 1 Query: 100 ANRASLAQASMVAPFTGLKSSS 165 A A++AQA+MVAPFTGLK+++ Sbjct: 6 ATVATVAQANMVAPFTGLKANA 27
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS5_FLAPR (Ribulose bisphosphate carboxylase small chain 5, chloroplastic OS=Flaveria pringlei GN=RBCS5 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 6.178e-35 Identity = 64/115 (55.65%), Postives = 83/115 (72.17%), Query Frame = 3 Query: 180 TKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524 TKK N D +++ SNGGR+QCMKVWPP G K+ ET SYLP L + L KE+ YLLR+ W+PC EF+LE G+V RE+ SP YYDGRYWT K ++G TD+A + ++E +EYP Sbjct: 32 TKKVN-DFSTLPSNGGRVQCMKVWPPLGKKRYETLSYLPNLTEVQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYP 145 HSP 2 Score: 32.7278 bits (73), Expect = 6.178e-35 Identity = 15/22 (68.18%), Postives = 20/22 (90.91%), Query Frame = 1 Query: 100 ANRASLAQASMVAPFTGLKSSS 165 A A++AQA+MVAPFTGLKS++ Sbjct: 6 ATVATVAQANMVAPFTGLKSNA 27
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS6_FLAPR (Ribulose bisphosphate carboxylase small chain 6, chloroplastic OS=Flaveria pringlei GN=RBCS6 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.668e-34 Identity = 63/115 (54.78%), Postives = 81/115 (70.43%), Query Frame = 3 Query: 180 TKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524 TKK N D +++ SNGGR+QCMKVWPP G KK T SYLP L + L KE+ YLLR+ W+PC EF+LE G+V RE+ SP YYDGRYWT K ++G TD+ + ++E +EYP Sbjct: 32 TKKVN-DFSTLPSNGGRVQCMKVWPPLGKKKYXTLSYLPNLTEAQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSVQVMKELQECKKEYP 145 HSP 2 Score: 31.5722 bits (70), Expect = 6.668e-34 Identity = 14/22 (63.64%), Postives = 20/22 (90.91%), Query Frame = 1 Query: 100 ANRASLAQASMVAPFTGLKSSS 165 A A++AQA+MVAPFTGLK+++ Sbjct: 6 ATVAAVAQANMVAPFTGLKANA 27
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS_HELAN (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Helianthus annuus GN=RBCS PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 1.181e-33 Identity = 66/115 (57.39%), Postives = 82/115 (71.30%), Query Frame = 3 Query: 180 TKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524 T K ND +++ SNGGR+QCMKVWPP GLKK ET SYLPPL + L KE+ YLLR W+PC EF+LE G+V RE+ SP YYDGRYWT K ++G TD+A + + E +EYP Sbjct: 36 TTKKANDFSTLPSNGGRVQCMKVWPPLGLKKYETLSYLPPLTETQLAKEVDYLLRKKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELAECKKEYP 150
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS_FLATR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Flaveria trinervia GN=RBCS PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.919e-33 Identity = 64/115 (55.65%), Postives = 82/115 (71.30%), Query Frame = 3 Query: 180 TKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524 TKK N +++ SNGGR+QCMKVWPP G KK ET SYLP L + L KE+ YLLR+ W+PC EF+LE G+V RE+ SP YYDGRYWT K ++G TD+A + ++E +EYP Sbjct: 32 TKKVNG-FSTLPSNGGRVQCMKVWPPVGKKKYETLSYLPELTEAQLAKEVDYLLRNKWVPCLEFELEHGFVYRENASSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYP 145 HSP 2 Score: 28.1054 bits (61), Expect = 1.919e-33 Identity = 12/22 (54.55%), Postives = 18/22 (81.82%), Query Frame = 1 Query: 100 ANRASLAQASMVAPFTGLKSSS 165 A A++ Q +MVAPFTGLK+++ Sbjct: 6 ATVAAVPQTNMVAPFTGLKANA 27
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS4_LEMGI (Ribulose bisphosphate carboxylase small chain SSU40B, chloroplastic OS=Lemna gibba GN=SSU40B PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.799e-32 Identity = 65/117 (55.56%), Postives = 84/117 (71.79%), Query Frame = 3 Query: 180 TKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYPPH 530 T+K NND++++ SNGGR+ CM+VWPP GLKK ET SYLPPL+ E L KE+ YLLR+ W+PC EF E G+V RE+ SP YYDGRYWT K ++G TDA+ + V E + YP + Sbjct: 38 TRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKE-GFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEY 153 The following BLAST results are available for this feature:
BLAST of EY702591 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 104
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Sequences
The
following sequences are available for this feature:
EST sequence >EY702591 ID=EY702591; Name=EY702591; organism=Citrus sinensis; type=EST; length=963bpback to top |