EY702591
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS4_FLAPR (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Flaveria pringlei GN=RBCS4 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 6.481e-32 Identity = 65/115 (56.52%), Postives = 83/115 (72.17%), Query Frame = 3
Query: 180 TKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524
TKK N D +++ SNGGR+QCMKVWPP G KK ET SYLP L + L KE+ YLLR+ W+PC EF+LE G+V RE+ SP YYDGRYWT K ++G TD+A + ++E +EYP
Sbjct: 37 TKKAN-DFSTLPSNGGRVQCMKVWPPLGKKKYETLSYLPNLTEAQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYP 150
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS1_LEMGI (Ribulose bisphosphate carboxylase small chain SSU1, chloroplastic OS=Lemna gibba GN=SSU1 PE=2 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 1.444e-31 Identity = 64/117 (54.70%), Postives = 84/117 (71.79%), Query Frame = 3
Query: 180 TKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYPPH 530
T+K NND++++ S+GGR+ CM+VWPP GLKK ET SYLPPL+ E L KE+ YLLR+ W+PC EF E G+V RE+ SP YYDGRYWT K ++G TDA+ + V E + YP +
Sbjct: 34 TRKANNDLSTLPSSGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKE-GFVYRENNASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEY 149
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS_HORVU (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.712e-31 Identity = 63/118 (53.39%), Postives = 82/118 (69.49%), Query Frame = 3
Query: 171 GAGTKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524
G + +N ++ SNGGR++CM+VWP G+KK ET SYLPPL+ EALLK++ YL+RS W+PC EF + G++ REH SP YYDGRYWT K ++G TDA LN V E +EYP
Sbjct: 24 GLPVSRRSNASSASVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYP 140 HSP 2 Score: 24.6386 bits (52), Expect = 1.712e-31 Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 1
Query: 118 AQASMVAPFTGLKSSSG 168
+ A+ VAPF GLKS++G
Sbjct: 8 SSATSVAPFQGLKSTAG 24
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS2_WHEAT (Ribulose bisphosphate carboxylase small chain PW9, chloroplastic OS=Triticum aestivum PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.782e-31 Identity = 63/106 (59.43%), Postives = 77/106 (72.64%), Query Frame = 3
Query: 207 SIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524
S SNGGR++CM+VWP G+KK ET SYLPPL+ EALLK++ YL+RS W+PC EF + G+V REH SP YYDGRYWT K ++G TDA LN V E +EYP
Sbjct: 37 SSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYP 141 HSP 2 Score: 24.6386 bits (52), Expect = 3.782e-31 Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 1
Query: 118 AQASMVAPFTGLKSSSG 168
+ A+ VAPF GLKS++G
Sbjct: 8 SSATTVAPFQGLKSTAG 24
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS3_LEMGI (Ribulose bisphosphate carboxylase small chain SSU40A, chloroplastic OS=Lemna gibba GN=SSU40A PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 4.201e-31 Identity = 63/117 (53.85%), Postives = 83/117 (70.94%), Query Frame = 3
Query: 180 TKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYPPH 530
T+K NN+++++ NGGR+ CM+VWPP GLKK ET SYLPPL+ E L KE+ YLLR+ W+PC EF E G+V RE+ SP YYDGRYWT K ++G TDA+ + V E + YP +
Sbjct: 38 TRKANNNLSTLPGNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKE-GFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEY 153
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS1_PEA (Ribulose bisphosphate carboxylase small chain, chloroplastic (Fragment) OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.596e-30 Identity = 63/107 (58.88%), Postives = 74/107 (69.16%), Query Frame = 3
Query: 204 TSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524
T I SNG R++CM+VWPP G KK ET SYLPPL + LLKE+ YLLR GW+PC EF+L KG+V EH SPRYYDGRYWT K ++G TD A + V E YP
Sbjct: 2 TDITSNGERVKCMQVWPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEFELLKGFVYGEHNKSPRYYDGRYWTMWKLPMFGTTDPAQVVKEVDEVVAAYP 108
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS1_WHEAT (Ribulose bisphosphate carboxylase small chain PWS4.3, chloroplastic OS=Triticum aestivum PE=3 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 2.401e-30 Identity = 62/115 (53.91%), Postives = 82/115 (71.30%), Query Frame = 3
Query: 180 TKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524
++++ + S+ SNGGR++CM+VWP G+KK ET SYLPPL+ EAL K++ YL+RS W+PC EF + G+V REH SP YYDGRYWT K ++G TDA LN V E +EYP
Sbjct: 28 SRRSRGSLGSV-SNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALSKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYP 140 HSP 2 Score: 24.6386 bits (52), Expect = 2.401e-30 Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 1
Query: 118 AQASMVAPFTGLKSSSG 168
+ A+ VAPF GLKS++G
Sbjct: 8 SSATTVAPFQGLKSTAG 24
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS1_ORYSJ (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Oryza sativa subsp. japonica GN=RBCS PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.259e-28 Identity = 60/114 (52.63%), Postives = 76/114 (66.67%), Query Frame = 3
Query: 183 KKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524
+++ N SNGGR++CM+VWP G+KK ET SYLPPL E LLK+I YLLRS W+PC EF + G+V RE+ SP YYDGRYWT K ++G TDA L + E + YP
Sbjct: 29 RRSGNSSFGNVSNGGRIRCMQVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFS-KVGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYP 141 HSP 2 Score: 24.6386 bits (52), Expect = 1.259e-28 Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 1
Query: 118 AQASMVAPFTGLKSSSG 168
+ A+ VAPF GLKS++G
Sbjct: 8 SSATTVAPFQGLKSTAG 24
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS1_ORYSI (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Oryza sativa subsp. indica GN=RBCS PE=2 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 1.259e-28 Identity = 60/114 (52.63%), Postives = 76/114 (66.67%), Query Frame = 3
Query: 183 KKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524
+++ N SNGGR++CM+VWP G+KK ET SYLPPL E LLK+I YLLRS W+PC EF + G+V RE+ SP YYDGRYWT K ++G TDA L + E + YP
Sbjct: 29 RRSGNSSFGNVSNGGRIRCMQVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFS-KVGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYP 141 HSP 2 Score: 24.6386 bits (52), Expect = 1.259e-28 Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 1
Query: 118 AQASMVAPFTGLKSSSG 168
+ A+ VAPF GLKS++G
Sbjct: 8 SSATTVAPFQGLKSTAG 24
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS2_ORYSJ (Ribulose bisphosphate carboxylase small chain A, chloroplastic OS=Oryza sativa subsp. japonica GN=RBCS-A PE=2 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 1.639e-28 Identity = 61/114 (53.51%), Postives = 78/114 (68.42%), Query Frame = 3
Query: 183 KKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524
+ TN+ ++ SNGGR++CM+VWP G+KK ET SYLPPL E LLK+I YLLRS W+PC EF + G+V RE+ SP YYDGRYWT K ++G TDA L + E + YP
Sbjct: 30 RSTNSGFGNV-SNGGRIKCMQVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFS-KVGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYP 141 HSP 2 Score: 24.6386 bits (52), Expect = 1.639e-28 Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 1
Query: 118 AQASMVAPFTGLKSSSG 168
+ A+ VAPF GLKS++G
Sbjct: 8 SSATSVAPFQGLKSTAG 24 The following BLAST results are available for this feature:
BLAST of EY702591 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 104
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Sequences
The
following sequences are available for this feature:
EST sequence >EY702591 ID=EY702591; Name=EY702591; organism=Citrus sinensis; type=EST; length=963bpback to top |