DY305585

Overview
NameDY305585
Unique NameDY305585
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1188
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8_YEAST (Autophagy-related protein 8 OS=Saccharomyces cerevisiae GN=ATG8 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 2.471e-26
Identity = 58/77 (75.32%), Postives = 66/77 (85.71%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTF 903
            S +PE +  +YLVPADLTV QFVYVIRKRI L  EKAIFIFV++ LPPT A+MSAIY+E KD+DGFLYVTYSGENTF
Sbjct:   39 SDIPEIDKRKYLVPADLTVGQFVYVIRKRIMLPPEKAIFIFVNDTLPPTAALMSAIYQEHKDKDGFLYVTYSGENTF 115          
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8_YEAS7 (Autophagy-related protein 8 OS=Saccharomyces cerevisiae (strain YJM789) GN=ATG8 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 2.471e-26
Identity = 58/77 (75.32%), Postives = 66/77 (85.71%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTF 903
            S +PE +  +YLVPADLTV QFVYVIRKRI L  EKAIFIFV++ LPPT A+MSAIY+E KD+DGFLYVTYSGENTF
Sbjct:   39 SDIPEIDKRKYLVPADLTVGQFVYVIRKRIMLPPEKAIFIFVNDTLPPTAALMSAIYQEHKDKDGFLYVTYSGENTF 115          
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8_CRYNE (Autophagy-related protein 8 OS=Cryptococcus neoformans GN=ATG8 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 2.471e-26
Identity = 57/85 (67.06%), Postives = 68/85 (80.00%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTFETTSQFTL 927
            S +P  +  +YLVPADLTV QFVYVIRKRIKL+ EKAIFIFVD++LPPT A+MS+IY E KDEDGFLYV Y+ ENTF    Q+ +
Sbjct:   40 SDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLAPEKAIFIFVDDILPPTAALMSSIYDEHKDEDGFLYVLYASENTFGDLEQYAI 124          
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8_SCHPO (Autophagy-related protein 8 OS=Schizosaccharomyces pombe GN=atg8 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 3.227e-26
Identity = 57/83 (68.67%), Postives = 66/83 (79.52%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTFETTSQF 921
            S +   +  +YLVP+DLTV QFVYVIRKRIKLS EKAIFIF+D +LPPT A+MS IY+E K EDGFLY+TYSGENTF T   F
Sbjct:   39 SDIAAIDKKKYLVPSDLTVGQFVYVIRKRIKLSPEKAIFIFIDEILPPTAALMSTIYEEHKSEDGFLYITYSGENTFGTVFPF 121          
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8_SCLS1 (Autophagy-related protein 8 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=atg8 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 4.215e-26
Identity = 57/77 (74.03%), Postives = 66/77 (85.71%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTF 903
            S +   +  +YLVP+DLTV QFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IY+E KDEDGFLY++YSGENTF
Sbjct:   39 SDIATIDKKKYLVPSDLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYISYSGENTF 115          
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8_LACBI (Autophagy-related protein 8 OS=Laccaria bicolor GN=ATG8 PE=2 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 4.215e-26
Identity = 57/77 (74.03%), Postives = 66/77 (85.71%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTF 903
            + +P  +  +YLVP+DLTV QFVYVIRKRIKL+ EKAIFIFVD VLPPT A+MSAIY+E KDED FLYV+YSGENTF
Sbjct:   39 TDIPTIDKKKYLVPSDLTVGQFVYVIRKRIKLAPEKAIFIFVDEVLPPTAALMSAIYEEHKDEDNFLYVSYSGENTF 115          
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8_BOTFB (Autophagy-related protein 8 OS=Botryotinia fuckeliana (strain B05.10) GN=atg8 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 4.215e-26
Identity = 57/77 (74.03%), Postives = 66/77 (85.71%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTF 903
            S +   +  +YLVP+DLTV QFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IY+E KDEDGFLY++YSGENTF
Sbjct:   39 SDIATIDKKKYLVPSDLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYISYSGENTF 115          
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8_CANAL (Autophagy-related protein 8 OS=Candida albicans GN=ATG8 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 5.505e-26
Identity = 56/77 (72.73%), Postives = 66/77 (85.71%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTF 903
            S +PE +  +YLVP DLTV QFVYVIRKRIKL +EKAIFIFV+++LPPT A++S IY+E KDEDGFLYV YSGENTF
Sbjct:   39 SDIPEIDKRKYLVPVDLTVGQFVYVIRKRIKLPSEKAIFIFVNDILPPTAALISTIYEEHKDEDGFLYVLYSGENTF 115          
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8_VANPO (Autophagy-related protein 8 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=ATG8 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 7.189e-26
Identity = 56/77 (72.73%), Postives = 66/77 (85.71%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTF 903
            S +PE +  +YLVP+DLTV QFVYVIRKRI L  EKAIFIFV++ LPPT A+MSA+Y+E KD+DGFLYVTYSGENTF
Sbjct:   39 SDIPEIDKRKYLVPSDLTVGQFVYVIRKRIMLPPEKAIFIFVNDTLPPTAALMSAVYQEHKDKDGFLYVTYSGENTF 115          
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8_USTMA (Autophagy-related protein 8 OS=Ustilago maydis GN=ATG8 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 7.189e-26
Identity = 57/77 (74.03%), Postives = 66/77 (85.71%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTF 903
            + +P  +  +YLVP+DLTV QFVYVIRKRIKL+ EKAIFIFVD VLP T A+MSAIY+E KDEDGFLYV+YSGENTF
Sbjct:   39 TDIPTIDKKKYLVPSDLTVGQFVYVIRKRIKLAPEKAIFIFVDEVLPATAALMSAIYEEHKDEDGFLYVSYSGENTF 115          
The following BLAST results are available for this feature:
BLAST of DY305585 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
ATG8_YEAST2.471e-2675.32Autophagy-related protein 8 OS=Saccharomyces cerev... [more]
ATG8_YEAS72.471e-2675.32Autophagy-related protein 8 OS=Saccharomyces cerev... [more]
ATG8_CRYNE2.471e-2667.06Autophagy-related protein 8 OS=Cryptococcus neofor... [more]
ATG8_SCHPO3.227e-2668.67Autophagy-related protein 8 OS=Schizosaccharomyces... [more]
ATG8_SCLS14.215e-2674.03Autophagy-related protein 8 OS=Sclerotinia sclerot... [more]
ATG8_LACBI4.215e-2674.03Autophagy-related protein 8 OS=Laccaria bicolor GN... [more]
ATG8_BOTFB4.215e-2674.03Autophagy-related protein 8 OS=Botryotinia fuckeli... [more]
ATG8_CANAL5.505e-2672.73Autophagy-related protein 8 OS=Candida albicans GN... [more]
ATG8_VANPO7.189e-2672.73Autophagy-related protein 8 OS=Vanderwaltozyma pol... [more]
ATG8_USTMA7.189e-2674.03Autophagy-related protein 8 OS=Ustilago maydis GN=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1CB11RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305585 ID=DY305585; Name=DY305585; organism=Citrus sinensis; type=EST; length=1188bp
GATTAACACTTGAGCTGCATTATTTGAAACAATTCTTGGTAGCAATCTCA
TCAACTTTACGTAGCACTCTCATTCCTTTCTTTTCTAAGGTATATTGATC
TCATTCCTCTGTGGTAAGGGGCAGCCAGCAGAGTATGGCAACCTCTTACT
TGTGCTACTTTGTTTGTAATATTACCATAGTTTTCATTGTTATCTTATAT
TGTTCTTCCTGTTTCATTTAGCTGATCACATGGCTCTGTCATGTGAGTCT
GCATACATCCTATGACAGCTTCTTGCAGCTATTTTCTTTGTGGGTCTTGC
TAGCTTACAGTTTTTGTATATTACAGCCCATAAAGAAGGGGCGTTAACTG
GCCCTCATCCAGTTACCCCTTTTGGCCTGGCTGTACATTACAGTAAATGT
AAGGTAGCCATGTCTTTTTTCCATTTTTTTCCTTTATATTTGAGATTAAA
ACCTAAGACCTAATCAAAATTTAGTCATTCATTTGTTTACCTGATAATCA
TCATATCTATTACTTCTTTTTCTTTGTCGCATTTCTTTGAAAGATCATTG
TATTTGTAGAATTGGCTGTCGCTTCAGTGTTTATAGTTGCTATCATTGCT
GACAGATGGTAATTTAAATGTCCATATGGACTATAACAACTCGCTACTTG
ATTCTATCATACTAATAAGGTTTCCTCTTTACCTGAATGTGAAAATTACA
GGTATCTTGTTCCAGCTGACCTGACTGTANGACAATTTGTCTATGTCATC
CGTAAAAGGATCAAACTGAGTGCTGAAAAGGCGATATTTATTTTTGTGGA
TAATGTGCTCCCACCTACAGGTGCAATTATGTCTGCCATATACAAGGAAA
AAAAGGATGAAGATGGTTTTCTTTATGTGACTTACAGTGGGGAGAACACA
TTTGAAACCACATCCCAGTTTACCCTTGGAATATTATTCGCCTCTTGTGT
GGGTTCCTGTGGCGACCACATTTTATCTTATTAACATCCTTGCTTTCCGC
CTATAATTCCTTTATCGGGCAAATTTATTATTTAAAAAAAAATGGCCCGT
AAAAAATGAACGGTTACTAATGTTAATAAATTCTAAAGGCAAAAAAATGA
CAAATTCTTTCTTCCCTTTCCTTTTTTAAAAAATTTTTTTTTCGGTTTGG
GGATTTTTTCGGGGGGGTTTCCATCCTGGAATATAATT
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