DY305566

Overview
NameDY305566
Unique NameDY305566
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1246
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305566 vs. ExPASy Swiss-Prot
Match: GPX4_BOVIN (Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Bos taurus GN=GPX4 PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 1.050e-20
Identity = 50/94 (53.19%), Postives = 67/94 (71.28%), Query Frame = 1
Query:  520 GLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLK-SSKG-GLFGDSIKWNFS 795
            G T+ NYT+L  L+ +Y   GL ILAFPCNQFG QEPG N +I+EFA   +  +F +F K+ VNGD+A PL+K +K   KG G+ G++IKWNF+
Sbjct:   74 GKTDVNYTQLVDLHARYAECGLRILAFPCNQFGRQEPGSNAEIKEFA-AGYNVKFDLFSKICVNGDDAHPLWKWMKVQPKGRGMLGNAIKWNFT 166          

HSP 2 Score: 22.3274 bits (46), Expect = 1.050e-20
Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 3
Query:  795 QFLVDREGKGVERYAP 842
            +FL+D+ G  V+RY P
Sbjct:  167 KFLIDKNGCVVKRYGP 182          
BLAST of DY305566 vs. ExPASy Swiss-Prot
Match: GPX41_MOUSE (Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Mus musculus GN=Gpx4 PE=1 SV=4)

HSP 1 Score: 98.9821 bits (245), Expect = 1.367e-20
Identity = 49/94 (52.13%), Postives = 68/94 (72.34%), Query Frame = 1
Query:  520 GLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLK-SSKG-GLFGDSIKWNFS 795
            G T+ NYT+L  L+ +Y   GL ILAFPCNQFG QEPG N++I+EFA   +  +F ++ K+ VNGD+A PL+K +K   KG G+ G++IKWNF+
Sbjct:   74 GKTDVNYTQLVDLHARYAECGLRILAFPCNQFGRQEPGSNQEIKEFA-AGYNVKFDMYSKICVNGDDAHPLWKWMKVQPKGRGMLGNAIKWNFT 166          

HSP 2 Score: 22.3274 bits (46), Expect = 1.367e-20
Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 3
Query:  795 QFLVDREGKGVERYAP 842
            +FL+D+ G  V+RY P
Sbjct:  167 KFLIDKNGCVVKRYGP 182          
BLAST of DY305566 vs. ExPASy Swiss-Prot
Match: GPX42_RAT (Phospholipid hydroperoxide glutathione peroxidase, nuclear OS=Rattus norvegicus GN=Gpx4 PE=2 SV=3)

HSP 1 Score: 98.5969 bits (244), Expect = 1.763e-20
Identity = 49/94 (52.13%), Postives = 67/94 (71.28%), Query Frame = 1
Query:  520 GLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLK-SSKG-GLFGDSIKWNFS 795
            G T+ NYT+L  L+ +Y   GL ILAFPCNQFG QEPG N++I+EFA   +   F ++ K+ VNGD+A PL+K +K   KG G+ G++IKWNF+
Sbjct:  130 GKTDVNYTQLVDLHARYAECGLRILAFPCNQFGRQEPGSNQEIKEFA-AGYNVRFDMYSKICVNGDDAHPLWKWMKVQPKGRGMLGNAIKWNFT 222          

HSP 2 Score: 22.3274 bits (46), Expect = 1.763e-20
Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 3
Query:  795 QFLVDREGKGVERYAP 842
            +FL+D+ G  V+RY P
Sbjct:  223 KFLIDKNGCVVKRYGP 238          
BLAST of DY305566 vs. ExPASy Swiss-Prot
Match: GPX41_RAT (Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Rattus norvegicus GN=Gpx4 PE=1 SV=3)

HSP 1 Score: 98.5969 bits (244), Expect = 1.778e-20
Identity = 49/94 (52.13%), Postives = 67/94 (71.28%), Query Frame = 1
Query:  520 GLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLK-SSKG-GLFGDSIKWNFS 795
            G T+ NYT+L  L+ +Y   GL ILAFPCNQFG QEPG N++I+EFA   +   F ++ K+ VNGD+A PL+K +K   KG G+ G++IKWNF+
Sbjct:   74 GKTDVNYTQLVDLHARYAECGLRILAFPCNQFGRQEPGSNQEIKEFA-AGYNVRFDMYSKICVNGDDAHPLWKWMKVQPKGRGMLGNAIKWNFT 166          

HSP 2 Score: 22.3274 bits (46), Expect = 1.778e-20
Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 3
Query:  795 QFLVDREGKGVERYAP 842
            +FL+D+ G  V+RY P
Sbjct:  167 KFLIDKNGCVVKRYGP 182          
BLAST of DY305566 vs. ExPASy Swiss-Prot
Match: BSAA_BACHD (Glutathione peroxidase homolog bsaA OS=Bacillus halodurans GN=bsaA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 2.806e-20
Identity = 51/110 (46.36%), Postives = 66/110 (60.00%), Query Frame = 1
Query:  514 RSGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSSSWWIGKGKVLNVMPP 843
            + GLT   Y EL  LY+ YK+QG  +L FP NQF  QEPGD+ +I  F    +   FPIF+KV VNG  A PL+++L S +GGLF + IKWNF+       G V+    P
Sbjct:   34 KCGLT-PQYEELQILYETYKDQGFTVLGFPSNQFMNQEPGDHNEIAAFCERNYGVSFPIFEKVKVNGKEAHPLFQYLTSQQGGLFTEKIKWNFTKFLIDRSGNVVKRYAP 142          
BLAST of DY305566 vs. ExPASy Swiss-Prot
Match: GPX4_HYLLA (Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Hylobates lar GN=GPX4 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 3.665e-20
Identity = 53/110 (48.18%), Postives = 71/110 (64.55%), Query Frame = 1
Query:  520 GLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLK-SSKG-GLFGDSIKWNFSSSWWIGKGKVLNVMPP 843
            G T  NYT+L  L+ +Y   GL  LAFPCNQFG QEPG NE+I+EFA   +  +F +F K+ VNGD+A PL+K +K   KG G+ G++IKWNF+   +   G V+    P
Sbjct:   74 GKTEVNYTQLVDLHARYAECGLRFLAFPCNQFGKQEPGSNEEIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLFDKNGCVVKRYGP 182          
BLAST of DY305566 vs. ExPASy Swiss-Prot
Match: GPX4_PIG (Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Sus scrofa GN=GPX4 PE=1 SV=3)

HSP 1 Score: 96.6709 bits (239), Expect = 6.620e-20
Identity = 49/94 (52.13%), Postives = 66/94 (70.21%), Query Frame = 1
Query:  520 GLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLK-SSKG-GLFGDSIKWNFS 795
            G T  NYT+L  L+ +Y   GL ILAFPCNQFG QEPG + +I+EFA   +  +F +F K+ VNGD+A PL+K +K   KG G+ G++IKWNF+
Sbjct:   74 GKTEVNYTQLVDLHARYAECGLRILAFPCNQFGRQEPGSDAEIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMKVQPKGRGMLGNAIKWNFT 166          

HSP 2 Score: 22.3274 bits (46), Expect = 6.620e-20
Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 3
Query:  795 QFLVDREGKGVERYAP 842
            +FL+D+ G  V+RY P
Sbjct:  167 KFLIDKNGCVVKRYGP 182          
BLAST of DY305566 vs. ExPASy Swiss-Prot
Match: GPX1_SCHPO (Glutathione peroxidase OS=Schizosaccharomyces pombe GN=gpx1 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.819e-19
Identity = 48/108 (44.44%), Postives = 63/108 (58.33%), Query Frame = 1
Query:  538 YTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSSSWWIGKGKVLNVMPPPQTSEH 861
            Y  L  LY KYK++G  IL FPCNQFG QEPG +E+I +F    +   FP+  K++VNGDN  P+Y+ LKS K  L  + IKWNF       +G+V+         EH
Sbjct:   42 YKGLEALYQKYKDRGFIILGFPCNQFGNQEPGSDEEIAQFCQKNYGVTFPVLAKINVNGDNVDPVYQFLKSQKKQLGLERIKWNFEKFLVNRQGQVIERYSSISKPEH 149          
BLAST of DY305566 vs. ExPASy Swiss-Prot
Match: GPO_LACLA (Glutathione peroxidase OS=Lactococcus lactis subsp. lactis GN=gpo PE=3 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 6.911e-19
Identity = 45/99 (45.45%), Postives = 59/99 (59.60%), Query Frame = 1
Query:  547 LSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSSSWWIGKGKVLNVMPP 843
            L +LY+ YK+QGLEIL FPCNQF  Q+ G+N +I EF    +   FP+F K+ VNG  A PLY+ LK    G    +IKWNF+      +G V+    P
Sbjct:   44 LEKLYENYKDQGLEILGFPCNQFVNQDAGENSEINEFCQLNYGVTFPMFQKIKVNGKEAHPLYQFLKKEAKGALSGTIKWNFTKFLIDREGNVIERFAP 142          
BLAST of DY305566 vs. ExPASy Swiss-Prot
Match: BSAA_STAAW (Glutathione peroxidase homolog bsaA OS=Staphylococcus aureus (strain MW2) GN=bsaA PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.179e-18
Identity = 42/104 (40.38%), Postives = 62/104 (59.62%), Query Frame = 1
Query:  532 SNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSSSWWIGKGKVLNVMPP 843
            S +  L  LY+KYK+QG  IL FPCNQFG QEPG  E+  +     +   FP+  K+DV G++  PL+++L +++ G F + IKWNF+      +G V+    P
Sbjct:   40 SQFEGLQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEEAAQNCKLNYGVTFPMHQKIDVKGEHQLPLFRYLTAAQHGFFNEKIKWNFTKFLVDREGNVVKRFAP 143          
The following BLAST results are available for this feature:
BLAST of DY305566 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
GPX4_BOVIN1.050e-2053.19Phospholipid hydroperoxide glutathione peroxidase,... [more]
GPX41_MOUSE1.367e-2052.13Phospholipid hydroperoxide glutathione peroxidase,... [more]
GPX42_RAT1.763e-2052.13Phospholipid hydroperoxide glutathione peroxidase,... [more]
GPX41_RAT1.778e-2052.13Phospholipid hydroperoxide glutathione peroxidase,... [more]
BSAA_BACHD2.806e-2046.36Glutathione peroxidase homolog bsaA OS=Bacillus ha... [more]
GPX4_HYLLA3.665e-2048.18Phospholipid hydroperoxide glutathione peroxidase,... [more]
GPX4_PIG6.620e-2052.13Phospholipid hydroperoxide glutathione peroxidase,... [more]
GPX1_SCHPO1.819e-1944.44Glutathione peroxidase OS=Schizosaccharomyces pomb... [more]
GPO_LACLA6.911e-1945.45Glutathione peroxidase OS=Lactococcus lactis subsp... [more]
BSAA_STAAW1.179e-1840.38Glutathione peroxidase homolog bsaA OS=Staphylococ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1BH05RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305566 ID=DY305566; Name=DY305566; organism=Citrus sinensis; type=EST; length=1246bp
GCTTAAACGAAATCTCGGAATCGCAACTTCCCTTATTTTGACAAGACATT
TCACTTCGAATTGTAAGCAAACCCTGTTGAGACCTTCGAAAAGTAATCCA
ATTTCTTTGGTTTCAAGGCCTTGTTTCTTCGCTTCTAGATCGGATCATAC
AATGGCAAGCCAATCGAAAACTTCAGTTCACGATTTCAGTGTTAAGGACG
CCAAGGGACAGGATGTTGATCTGAGCATCTACAAGGGAAAGCTTCTTTTG
ATTGTCAATGTTGCATCACAGTGGTATGCCTCAGCTCCTTTCATTTTTTA
CTTTTTTTTTTTTTTAAGTAATGATTCATTGATTATTGTTGATGCTTCCA
TTTAATTAACGCTAATACTCAGAAGCATGCATGCTTTCAATACAAATAAG
CATTTGTAGGAGATGATTTCACCCGGAGACTCTTTAATTCTTGCGCAGTG
CCGGCGACAGTTTTTTTTATTTTTTTTTCCTTTATCCGTTTTATTCATTT
ACCTGATTTTGAACGCAGTGGCTTGACCAATTCAAACTACACTGAGCTGA
GTCAGTTGTACGACAAGTACAAGAATCAAGGCTTGGAGATTCTGGCCTTT
CCTTGTAATCAGTTTGGAGCTCAAGAGCCAGGAGACAATGAACAGATTCA
AGAATTTGCATGCACTCGCTTTAAGGCTGAGTTTCCCATATTTGATAAGG
TTGATGTTAATGGTGATAATGCTGCTCCTTTATACAAGCATCTGAAATCC
AGCAAAGGTGGACTTTTTGGAGACAGCATCAAGTGGAACTTTTCCAGTTC
TTGGTGGATAGGGAAGGGAAAGGTGTTGAACGTTATGCCCCCCCCCCAAA
CCTCTGAACATTGAGGTAGTATAAAGATGTTTGGCTGGTAGTGGCGGTTG
CCCTTTCAATTTTAAGGAAAACTGGACGGTGGGTCTCATTTTATTCCTAA
AAAACTTATTTGGTTATTGGTTGTTACCCCCCTGCCGAAAGGAAAAAAAA
AACTTCCGGGAAACGGCTTAACCGCGGCTCCAACTTGCAGGGATCACCTT
CTTGTCAAAAAACAAAAAAAATCAGGCGGATAAAACCCCTCGGGGGGGGA
AAATTTGGTTTTAACTTTTGCCCCAAATTCGGAAAACCATTAAAGAAAAT
TTTCCCAAAAGCTGCAAAACAAATTTTCAGTGTGAAAAGTGGGCGTGGGT
TTGTTGTGGTTAGTAGGAGGATTGTCCCCCAAAATTTTTTAGTAGA
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