DY305550

Overview
NameDY305550
Unique NameDY305550
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1259
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: YNCC_BACSU (Putative metabolite transport protein yncC OS=Bacillus subtilis GN=yncC PE=3 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 2.662e-18
Identity = 54/183 (29.51%), Postives = 99/183 (54.10%), Query Frame = -3
Query:  271 SLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEM 819
            S+ +Y     +++G  +K   L+A +  G +    ++   +L+ K+ RRP+LL  +AG   +L  +AIF  V+D S         + +S  + ++AF    +GP+T +  +EI P +LR  G+ I V    + + V+   F  L  ++ +  +FF+F ++  +A  F Y  +PET+G+TLEE+
Sbjct:  274 SIMYYGTQILKESGFGTKAA-LIANIGNGLISVIAVIFGIWLVGKVRRRPILLIGLAGTTTALLLIAIFSIVLDGSMALPY----VVLSLTVLFLAFMQGCVGPVTWLVIAEIFPQRLRGLGSGISVFFLWILNFVIGFAFPILLSSVGLSFTFFIFVALGVLAIGFVYKFMPETKGRTLEEL 451          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: GTR1_RABIT (Solute carrier family 2, facilitated glucose transporter member 1 OS=Oryctolagus cuniculus GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 4.541e-18
Identity = 56/187 (29.95%), Postives = 100/187 (53.48%), Query Frame = -3
Query:  259 SLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALF 819
            ++F+Y    FEKAG+    + + AT+  G V T F +V+ F++++ GRR L L  +AGM A    + I LA+++Q    + W   L+I  +  +VAFF +G GPI     +E+     R    ++    N  ++ +V M F  + + +     F +F  +  + ++F Y  +PET+G+T +E+ + F
Sbjct:  289 AVFYYSTSIFEKAGV---QQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAACAVLMTIALALLEQ----LPWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAVAVAGFSNWTSNFIVGMCFQYVEQ-LCGPYVFIIFTVLLVLFFIFTYFKVPETKGRTFDEIASGF 467          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: GTR2_CHICK (Solute carrier family 2, facilitated glucose transporter member 2 OS=Gallus gallus GN=SLC2A2 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 5.930e-18
Identity = 54/187 (28.88%), Postives = 98/187 (52.41%), Query Frame = -3
Query:  259 SLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALF 819
            ++F+Y    F++AG+    + + AT+ VG V T F +++ FL++K GRR L L+ + GM+ S   + + L ++ Q      W   +++  +  +V FF +G GPI     +E+     R    ++    N   + +V M F  ++  +     F +FA +  V ++F Y  +PET+GK+ EE+ A F
Sbjct:  333 AIFYYSTNIFQRAGV---GQPVYATIGVGVVNTVFTVISVFLVEKAGRRSLFLAGLMGMLISAVAMTVGLVLLSQ----FAWMSYVSMVAIFLFVIFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFCNWACNFIVGMCFQYIAD-LCGPYVFVVFAVLLLVFFLFAYLKVPETKGKSFEEIAAAF 511          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: GTR1_CHICK (Solute carrier family 2, facilitated glucose transporter member 1 OS=Gallus gallus GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 7.745e-18
Identity = 57/189 (30.16%), Postives = 102/189 (53.97%), Query Frame = -3
Query:  259 SLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGS--FFLFASIASVAWVFFYPCLPETQGKTLEEMGALF 819
            ++F+Y    FEK+G+   ++ + AT+  G V T F +V+ F++++ GRR L L  +AGM      + I L ++DQ    + W   L+I  +  +VAFF IG GPI     +E+     R    ++  + N  ++ +V M F  +++   + GS  F +F  +  + ++F Y  +PET+G+T +E+   F
Sbjct:  288 AVFYYSTSIFEKSGV---EQPVYATIGSGVVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAILMTIALTLLDQ----MPWMSYLSIVAIFGFVAFFEIGPGPIPWFIVAELFSQGPRPAAFAVAGLSNWTSNFIVGMGFQYIAQ---LCGSYVFIIFTVLLVLFFIFTYFKVPETKGRTFDEIAYRF 466          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: XYLE_ECOLI (D-xylose-proton symporter OS=Escherichia coli (strain K12) GN=xylE PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.012e-17
Identity = 64/206 (31.07%), Postives = 106/206 (51.46%), Query Frame = -3
Query:  217 LFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITI------GGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALFGNFRWVRDSKRERR 816
            + +Y P  F+  G  S D  LL T+ VG +  TF ++A   +DK GR+PL +    GM   + +L    A   Q+   V      A+ ++L YVA F++  GP+  V  SEI P  +R +  +I V    + +  VS TF  + K   +      G S++++  +  +A +F +  +PET+GKTLEE+ AL     W  ++K+ ++
Sbjct:  296 VLYYAPEVFKTLG-ASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGT--AFYTQAPGIV------ALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEAL-----WEPETKKTQQ 487          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: XYLE_ECO57 (D-xylose-proton symporter OS=Escherichia coli O157:H7 GN=xylE PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.012e-17
Identity = 64/206 (31.07%), Postives = 106/206 (51.46%), Query Frame = -3
Query:  217 LFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITI------GGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALFGNFRWVRDSKRERR 816
            + +Y P  F+  G  S D  LL T+ VG +  TF ++A   +DK GR+PL +    GM   + +L    A   Q+   V      A+ ++L YVA F++  GP+  V  SEI P  +R +  +I V    + +  VS TF  + K   +      G S++++  +  +A +F +  +PET+GKTLEE+ AL     W  ++K+ ++
Sbjct:  296 VLYYAPEVFKTLG-ASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGT--AFYTQAPGIV------ALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEAL-----WEPETKKTQQ 487          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: GTR8_MOUSE (Solute carrier family 2, facilitated glucose transporter member 8 OS=Mus musculus GN=Slc2a8 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.321e-17
Identity = 67/228 (29.39%), Postives = 117/228 (51.32%), Query Frame = -3
Query:  259 PGRFVPIIVAARWFSFFPNRHPA*TSLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVI-----DQSH--------KKVIWAVGLA---ISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALF 894
            PG + P+I+      F   +     ++ FY    FE+A    KD +L A+V VG ++  F  VA  ++D+ GRR LL  S   M+ S++    +  +      + SH        + V   VGLA   + ++  ++A F++G GPI  +  SEI PL ++     I V+ N   + +V+  F S+ + +   G+F+L A+  +++ +F    +PET+G+TLE++ A F
Sbjct:  252 PGIYKPLIIGISLMVF--QQLSGVNAIMFYANSIFEEAKF--KDSSL-ASVTVGIIQVLFTAVAALIMDRAGRRLLLALSGVIMVFSMSAFGTYFKLTQSLPSNSSHVGLVPIAAEPVDVQVGLAWLAVGSMCLFIAGFAVGWGPIPWLLMSEIFPLHVKGVATGICVLTNWFMAFLVTKEFSSVMEMLRPYGAFWLTAAFCALSVLFTLTVVPETKGRTLEQVTAHF 474          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: GTR1_RAT (Solute carrier family 2, facilitated glucose transporter member 1 OS=Rattus norvegicus GN=Slc2a1 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.321e-17
Identity = 55/187 (29.41%), Postives = 99/187 (52.94%), Query Frame = -3
Query:  259 SLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALF 819
            ++F+Y    FEKAG+    + + AT+  G V T F +V+ F++++ GRR L L  +AGM      + I LA+++Q    + W   L+I  +  +VAFF +G GPI     +E+     R    ++    N  ++ +V M F  + + +     F +F  +  + ++F Y  +PET+G+T +E+ + F
Sbjct:  289 AVFYYSTSIFEKAGV---QQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALALLEQ----LPWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAVAVAGFSNWTSNFIVGMCFQYVEQ-LCGPYVFIIFTVLLVLFFIFTYFKVPETKGRTFDEIASGF 467          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: GTR8_BOVIN (Solute carrier family 2, facilitated glucose transporter member 8 OS=Bos taurus GN=SLC2A8 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 1.725e-17
Identity = 64/229 (27.95%), Postives = 111/229 (48.47%), Query Frame = -3
Query:  259 PGRFVPIIVAARWFSFFPNRHPA*TSLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVID-----QSHKKV------------IWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALF 894
            PG + P I+     +F   +     ++ FY    FE+A    KD +L A+V VG ++  F   A  ++D+ GRR LL  S   M+ S +    +  + +      SH  +            +    LA+ ++  ++A F++G GPI  +  SEI PL ++     + V+ N   + +V+  F SL + +   G+F+L ++      +F   C+PET+GKTLE++ A F
Sbjct:  252 PGVYKPFIIGISLMAF--QQLSGVNAVMFYAETIFEEAKF--KDSSL-ASVVVGVIQVLFTATAALIMDRAGRRLLLTLSGVVMVFSTSAFGTYFKLTEGGPSNSSHVDLPALVSMEAADTNVGLAWLAVGSMCLFIAGFAVGWGPIPWLLMSEIFPLHVKGVATGVCVLTNWFMAFLVTKEFSSLMEVLRPYGAFWLASAFCIFGVLFTLACVPETKGKTLEQITAHF 475          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: GTR1_SHEEP (Solute carrier family 2, facilitated glucose transporter member 1 (Fragment) OS=Ovis aries GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.725e-17
Identity = 55/187 (29.41%), Postives = 99/187 (52.94%), Query Frame = -3
Query:  259 SLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALF 819
            ++F+Y    FEKAG+    + + AT+  G V T F +V+ F++++ GRR L L  +AGM      + I LA+++Q    + W   L+I  +  +VAFF +G GPI     +E+     R    ++    N  ++ +V M F  + + +     F +F  +  + ++F Y  +PET+G+T +E+ + F
Sbjct:  187 AVFYYSTSIFEKAGV---QQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALALLEQ----LPWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQ-LCGPYVFIIFTVLLVLFFIFTYFKVPETKGRTFDEIASGF 365          
The following BLAST results are available for this feature:
BLAST of DY305550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
YNCC_BACSU2.662e-1829.51Putative metabolite transport protein yncC OS=Baci... [more]
GTR1_RABIT4.541e-1829.95Solute carrier family 2, facilitated glucose trans... [more]
GTR2_CHICK5.930e-1828.88Solute carrier family 2, facilitated glucose trans... [more]
GTR1_CHICK7.745e-1830.16Solute carrier family 2, facilitated glucose trans... [more]
XYLE_ECOLI1.012e-1731.07D-xylose-proton symporter OS=Escherichia coli (str... [more]
XYLE_ECO571.012e-1731.07D-xylose-proton symporter OS=Escherichia coli O157... [more]
GTR8_MOUSE1.321e-1729.39Solute carrier family 2, facilitated glucose trans... [more]
GTR1_RAT1.321e-1729.41Solute carrier family 2, facilitated glucose trans... [more]
GTR8_BOVIN1.725e-1727.95Solute carrier family 2, facilitated glucose trans... [more]
GTR1_SHEEP1.725e-1729.41Solute carrier family 2, facilitated glucose trans... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1BF05RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305550 ID=DY305550; Name=DY305550; organism=Citrus sinensis; type=EST; length=1259bp
GATTCATAATGCTTCATTTTCATTGCATAATGACTTCTTCAATCCCCCAT
TAGTGATCACCCCGCACACACCGCGACACAGTATTCATTTTAAAAAGCTA
TACCAAGATTTTAAAAACCATCGTATTTAATAAAATACCCTTCAGTTACC
GTTAGAAACCGGTCCTAACTGAACGTTACTCGCACCGTCACCGTTAATCC
CGTTGGCTTTGTTCCTCCTCCTCTCTCTCTTGGAATCCCTCACCCAACGG
AAATTACCAAAAAGCGCCCCCATCTCTTCAAGGGTTTTACCCTGCGTTTC
GGGGAGACACGGGTAAAAAAACACCCACGCAACTGATGCAATTGACGCGA
ATAAAAAGAAGGAGCCGCCAATCGTGATCGCTTTACTAAGCGATAGGAAA
GTCATCGATACAACCCCACTTGTGACCCTGTTCACCATCACCCCGATACT
CGCTCCCTGAGCGCGTAACTTCAACGGCAAAATCTCTGAACTGTAAACCA
TCGTGATGGGCCCCATCCCGATTGAGAAAAACGCCACGTAGGATAAAACC
GTTGAAATGGCCAAACCAACGGCCCAAATCACCTTTTTGTGTGACTGATC
GATGACTGCAAGAAAGATAGCAAGGGTCGCGAGCGAAGCGATCATGCCCG
CAACACTGCTCAAAAGCAACGGACGCCGTCCGATTTTGTCGAGTAAAAAC
GTAGCCACTAGGATGAAAGTGGTCTTGACAAATCCAACGGCTACAGTAGC
AAGTAAATTTTCGTCTTTTGACGTAATCCCAGCTTTTTCAAAGAATCCAG
GAATGTAAAAGAACAACGAAGTCTATGCCGGATGCCTGTTGGGAAAAAAT
GAAAACCAACGGGCTGCGACTATGATGGGGACAAAACGGCCGGGGAAGAA
CGGACCAACAACCTCTTTCCCAAACACCCCTCCCCACGGTGGAATTTTCG
GACATGAAAAAAAACCTCCCCTTGCCTTCTTCCAGAAAGGCCGGCGGGCT
TTTTTAAAACCGGAAAACTGAAACAAAAAAACCCCCCCTTTCAGCCCCAA
AAGTTTTTGCGAAAAAAATTTCTTTTGGTCCCGGCAAAATCCCCCCCTGG
TCCCCACCCCCCACCCGCGGGAAAAAAATTTGGGGGGGGGGGGAAAGCCC
CGCCCCAAGAGGGGGGGAAAAAAAAACAAAAGAGAGAGAAGGGGCGCCCC
AAAAAACTCCAAAAACACCATCACGGGCCCCCCCCCCCCCACACCAAGAT
AAAAGGAAG
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