DY305550

Overview
NameDY305550
Unique NameDY305550
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1259
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: GTR1_PIG (Solute carrier family 2, facilitated glucose transporter member 1 (Fragment) OS=Sus scrofa GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.725e-17
Identity = 55/187 (29.41%), Postives = 99/187 (52.94%), Query Frame = -3
Query:  259 SLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALF 819
            ++F+Y    FEKAG+    + + AT+  G V T F +V+ F++++ GRR L L  +AGM      + I LA+++Q    + W   L+I  +  +VAFF +G GPI     +E+     R    ++    N  ++ +V M F  + + +     F +F  +  + ++F Y  +PET+G+T +E+ + F
Sbjct:  248 AVFYYSTSIFEKAGV---QQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALALLEQ----LPWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQ-LCGPYVFIIFTVLLVLFFIFTYFKVPETKGRTFDEIASGF 426          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: MSSP2_ARATH (Monosaccharide-sensing protein 2 OS=Arabidopsis thaliana GN=MSSP2 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 2.253e-17
Identity = 64/195 (32.82%), Postives = 99/195 (50.77%), Query Frame = -3
Query:  259 LFFYIPGFFEKAG---------ITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALF 816
            + +Y P   E+AG         I+S   +LL +    FV    I VA  L+D  GRR LLL+++  +IASL  L I   V   S   ++ AV   +S VL Y  FF +G GP   +  SEI P ++R    +I  +   +   +V+ +   L K+I + G F ++A +  ++WVF +  +PET+G  LE +   F
Sbjct:  526 VLYYTPQILEQAGVGILLSNMGISSSSASLLISALTTFVMLPAIAVAMRLMDLSGRRTLLLTTIPILIASLLVLVISNLVHMNS---IVHAVLSTVSVVL-YFCFFVMGFGPAPNILCSEIFPTRVRGICIAICALTFWICDIIVTYSLPVLLKSIGLAGVFGMYAIVCCISWVFVFIKVPETKGMPLEVITEFF 716          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: ITR1_YEAST (Myo-inositol transporter 1 OS=Saccharomyces cerevisiae GN=ITR1 PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 2.253e-17
Identity = 62/213 (29.11%), Postives = 104/213 (48.83%), Query Frame = -3
Query:  208 SLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAI---FLAVIDQSHKKVIWAVGLA------ISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALFGNFRWVRDSKRERRRNK 819
            SL ++    FE  G  +     +      F+   F LVA F +DKIGRR +LL  + GM  +L   +I   FL +       V+ + G +      I  ++ + AF+++G+G +     SE+ P  +R  G S     N   S V++ TFL++ + IT  G+F  FA ++ ++ +F Y C PE  G  LEE+  +  +   ++ SK   ++ K
Sbjct:  355 SLMYFSGTIFETVGFKNSSAVSIIVSGTNFI---FTLVAFFSIDKIGRRTILLIGLPGMTMALVVCSIAFHFLGIKFDGAVAVVVSSGFSSWGIVIIVFIIVFAAFYALGIGTVPW-QQSELFPQNVRGIGTSYATATNWAGSLVIASTFLTMLQNITPAGTFAFFAGLSCLSTIFCYFCYPELSGLELEEVQTILKDGFNIKASKALAKKRK 563          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: GTR1_HUMAN (Solute carrier family 2, facilitated glucose transporter member 1 OS=Homo sapiens GN=SLC2A1 PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 2.253e-17
Identity = 55/187 (29.41%), Postives = 99/187 (52.94%), Query Frame = -3
Query:  259 SLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALF 819
            ++F+Y    FEKAG+    + + AT+  G V T F +V+ F++++ GRR L L  +AGM      + I LA+++Q    + W   L+I  +  +VAFF +G GPI     +E+     R    ++    N  ++ +V M F  + + +     F +F  +  + ++F Y  +PET+G+T +E+ + F
Sbjct:  289 AVFYYSTSIFEKAGV---QQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAILMTIALALLEQ----LPWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQ-LCGPYVFIIFTVLLVLFFIFTYFKVPETKGRTFDEIASGF 467          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: STP1_ARATH (Sugar transport protein 1 OS=Arabidopsis thaliana GN=STP1 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 3.844e-17
Identity = 65/223 (29.15%), Postives = 109/223 (48.88%), Query Frame = -3
Query:  172 LFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAV---IDQSHKKVI-WAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALFGNF----RWVRDSKRERRRNKANGINGDGASNV 816
            + FY P  F   G T+ D +L++ V  G V     LV+ + +D+ GRR L L     M+   A +A  +     +D +  ++  W   + ++ +  YVA F+   GP+  +  SEI PL++R+   SI V VN + + +++  FL++   +   G F +FA    V  +F Y  LPET+G  +EEMG ++ +     R+V D +           N  G  +V
Sbjct:  302 IMFYAPVLFNTIGFTT-DASLMSAVVTGSVNVAATLVSIYGVDRWGRRFLFLEGGTQMLICQAVVAACIGAKFGVDGTPGELPKWYAIVVVTFICIYVAGFAWSWGPLGWLVPSEIFPLEIRSAAQSITVSVNMIFTFIIAQIFLTMLCHLKF-GLFLVFAFFVVVMSIFVYIFLPETKGIPIEEMGQVWRSHWYWSRFVEDGEYGNALEMGKNSNQAGTKHV 522          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: GTR1_MOUSE (Solute carrier family 2, facilitated glucose transporter member 1 OS=Mus musculus GN=Slc2a1 PE=1 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 3.844e-17
Identity = 54/187 (28.88%), Postives = 99/187 (52.94%), Query Frame = -3
Query:  259 SLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALF 819
            ++F+Y    FEKAG+    + + AT+  G V T F +V+ F++++ GRR L L  +AGM      + I LA+++    ++ W   L+I  +  +VAFF +G GPI     +E+     R    ++    N  ++ +V M F  + + +     F +F  +  + ++F Y  +PET+G+T +E+ + F
Sbjct:  289 AVFYYSTSIFEKAGV---QQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALALLE----RLPWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQ-LCGPYVFIIFTVLLVLFFIFTYFKVPETKGRTFDEIASGF 467          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: GTR1_BOVIN (Solute carrier family 2, facilitated glucose transporter member 1 OS=Bos taurus GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 3.844e-17
Identity = 54/187 (28.88%), Postives = 99/187 (52.94%), Query Frame = -3
Query:  259 SLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALF 819
            ++F+Y    FEKAG+    + + AT+  G V T F +V+ F++++ GRR L L  +AGM      + I LA+++    ++ W   L+I  +  +VAFF +G GPI     +E+     R    ++    N  ++ +V M F  + + +     F +F  +  + ++F Y  +PET+G+T +E+ + F
Sbjct:  289 AVFYYSTSIFEKAGV---QQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALALLE----RLPWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQ-LCGPYVFIIFTVLLVLFFIFTYFKVPETKGRTFDEIASGF 467          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: STP13_ARATH (Sugar transport protein 13 OS=Arabidopsis thaliana GN=STP13 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 5.020e-17
Identity = 68/219 (31.05%), Postives = 101/219 (46.12%), Query Frame = -3
Query:  175 SLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAV--IDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALF--GNFRWVRDSKRERRRNKANGINGDGASN 819
            ++ FY P  F   G  S D +L + V  G V     LV+ + +DK+GRR LLL +   M  S   +AI L V   D S         L +  + +YVA F+   GP+  +  SE  PL+ R+ G S+ V VN + + +++  FLS+       G F  F++   +  VF    LPET+   +EEM       ++ W R           NG   +G SN
Sbjct:  302 AIMFYAPVLFSTLGFGS-DASLYSAVVTGAVNVLSTLVSIYSVDKVGRRVLLLEAGVQMFFSQVVIAIILGVKVTDTSTNLSKGFAILVVVMICTYVAAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFIIAQAFLSMLCHFKF-GIFIFFSAWVLIMSVFVMFLLPETKNIPIEEMTERVWKKHWFWARFMDDHNDHEFVNGEKSNGKSN 518          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: ITR1_SCHPO (Myo-inositol transporter 1 OS=Schizosaccharomyces pombe GN=itr1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 5.020e-17
Identity = 64/209 (30.62%), Postives = 103/209 (49.28%), Query Frame = -3
Query:  214 SLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQ-------SHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALFGNFRWVRDSKRERRR 819
            SL ++    FE  G  +     L   A  FV   F +VA  ++D  GRR LLL +V GMIA+L   A+    + +       S +   WA+ + IS ++ YVA ++ G+G +     SE+ P+ +R  G  +   VN   +  +  +FL+L   IT  G+F L+  +  + W+    C P+    T+EE+G L  +   VR+S R  +R
Sbjct:  356 SLMYFSSTIFEVVGFNNPTATGLIIAATNFV---FTIVAFGVIDFFGRRILLLLTVWGMIAALIVCAVAFHFLPKDENGNYTSGQSNAWAIVVLISMIV-YVASYASGLGNLPW-QQSELFPMSVRGLGTGMSTAVNWAGNLGIGASFLTLMSEITPTGTFALYGGLCFLGWLGALFCYPDLTDYTIEEIGELLKHGFGVRESMRHLKR 559          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: HUP2_CHLKE (H(+)/hexose cotransporter 2 OS=Chlorella kessleri GN=HUP2 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 6.557e-17
Identity = 64/197 (32.49%), Postives = 98/197 (49.75%), Query Frame = -3
Query:  238 SLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGM-IASLATLAIFLAVIDQSHKKVIWAVGLAISTVLS-YVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALFG-NFRWVR 819
            ++ FY+P  F   G T++   LL TV +G V      V+ F +DK GRR L L     M I  + T A+    +++    +  +    +  V+  YVA F+   GP+  +  SEI  L+ R  G S+ V+VN + S V+   FLS+  A+   G F  FA    +   F Y CLPET+G  +E +  +F  ++ W R
Sbjct:  308 AIMFYVPVLFSSFG-TARHAALLNTVIIGAVNVAATFVSIFSVDKFGRRGLFLEGGIQMFIGQVVTAAVLGVELNKYGTNLPSSTAAGVLVVICVYVAAFAWSWGPLGWLVPSEIQTLETRGAGMSMAVIVNFLFSFVIGQAFLSMMCAMR-WGVFLFFAGWVVIMTFFVYFCLPETKGVPVETVPTMFARHWLWGR 502          
The following BLAST results are available for this feature:
BLAST of DY305550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
GTR1_PIG1.725e-1729.41Solute carrier family 2, facilitated glucose trans... [more]
MSSP2_ARATH2.253e-1732.82Monosaccharide-sensing protein 2 OS=Arabidopsis th... [more]
ITR1_YEAST2.253e-1729.11Myo-inositol transporter 1 OS=Saccharomyces cerevi... [more]
GTR1_HUMAN2.253e-1729.41Solute carrier family 2, facilitated glucose trans... [more]
STP1_ARATH3.844e-1729.15Sugar transport protein 1 OS=Arabidopsis thaliana ... [more]
GTR1_MOUSE3.844e-1728.88Solute carrier family 2, facilitated glucose trans... [more]
GTR1_BOVIN3.844e-1728.88Solute carrier family 2, facilitated glucose trans... [more]
STP13_ARATH5.020e-1731.05Sugar transport protein 13 OS=Arabidopsis thaliana... [more]
ITR1_SCHPO5.020e-1730.62Myo-inositol transporter 1 OS=Schizosaccharomyces ... [more]
HUP2_CHLKE6.557e-1732.49H(+)/hexose cotransporter 2 OS=Chlorella kessleri ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1BF05RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305550 ID=DY305550; Name=DY305550; organism=Citrus sinensis; type=EST; length=1259bp
GATTCATAATGCTTCATTTTCATTGCATAATGACTTCTTCAATCCCCCAT
TAGTGATCACCCCGCACACACCGCGACACAGTATTCATTTTAAAAAGCTA
TACCAAGATTTTAAAAACCATCGTATTTAATAAAATACCCTTCAGTTACC
GTTAGAAACCGGTCCTAACTGAACGTTACTCGCACCGTCACCGTTAATCC
CGTTGGCTTTGTTCCTCCTCCTCTCTCTCTTGGAATCCCTCACCCAACGG
AAATTACCAAAAAGCGCCCCCATCTCTTCAAGGGTTTTACCCTGCGTTTC
GGGGAGACACGGGTAAAAAAACACCCACGCAACTGATGCAATTGACGCGA
ATAAAAAGAAGGAGCCGCCAATCGTGATCGCTTTACTAAGCGATAGGAAA
GTCATCGATACAACCCCACTTGTGACCCTGTTCACCATCACCCCGATACT
CGCTCCCTGAGCGCGTAACTTCAACGGCAAAATCTCTGAACTGTAAACCA
TCGTGATGGGCCCCATCCCGATTGAGAAAAACGCCACGTAGGATAAAACC
GTTGAAATGGCCAAACCAACGGCCCAAATCACCTTTTTGTGTGACTGATC
GATGACTGCAAGAAAGATAGCAAGGGTCGCGAGCGAAGCGATCATGCCCG
CAACACTGCTCAAAAGCAACGGACGCCGTCCGATTTTGTCGAGTAAAAAC
GTAGCCACTAGGATGAAAGTGGTCTTGACAAATCCAACGGCTACAGTAGC
AAGTAAATTTTCGTCTTTTGACGTAATCCCAGCTTTTTCAAAGAATCCAG
GAATGTAAAAGAACAACGAAGTCTATGCCGGATGCCTGTTGGGAAAAAAT
GAAAACCAACGGGCTGCGACTATGATGGGGACAAAACGGCCGGGGAAGAA
CGGACCAACAACCTCTTTCCCAAACACCCCTCCCCACGGTGGAATTTTCG
GACATGAAAAAAAACCTCCCCTTGCCTTCTTCCAGAAAGGCCGGCGGGCT
TTTTTAAAACCGGAAAACTGAAACAAAAAAACCCCCCCTTTCAGCCCCAA
AAGTTTTTGCGAAAAAAATTTCTTTTGGTCCCGGCAAAATCCCCCCCTGG
TCCCCACCCCCCACCCGCGGGAAAAAAATTTGGGGGGGGGGGGAAAGCCC
CGCCCCAAGAGGGGGGGAAAAAAAAACAAAAGAGAGAGAAGGGGCGCCCC
AAAAAACTCCAAAAACACCATCACGGGCCCCCCCCCCCCCACACCAAGAT
AAAAGGAAG
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