DY305550

Overview
NameDY305550
Unique NameDY305550
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1259
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: MYCT_MOUSE (Proton myo-inositol cotransporter OS=Mus musculus GN=Slc2a13 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 3.254e-16
Identity = 43/101 (42.57%), Postives = 67/101 (66.34%), Query Frame = -3
Query:  259 AISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALF 561
            A+  ++ Y+ FF+ GMGP+    +SEI PL  R+ G +    +N + + +VS+TFL  ++ +T  G+FFL+A  A+V  +F Y CLPET+GK LEE+ +LF
Sbjct:  479 ALVGLVLYLVFFAPGMGPMPWTVNSEIYPLWARSTGNACSAGINWIFNVLVSLTFLHTAEYLTYYGAFFLYAGFAAVGLLFVYGCLPETKGKKLEEIESLF 579          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: GTR3_CHICK (Solute carrier family 2, facilitated glucose transporter member 3 OS=Gallus gallus GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 3.254e-16
Identity = 57/187 (30.48%), Postives = 94/187 (50.27%), Query Frame = -3
Query:  259 SLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALF 819
            ++F+Y  G FE+AGIT   + + AT+  G V T F +V+ FL+++ GRR L L  + GM    A + I LA+      K  W   ++I     +VA F IG GPI     +E+     R    ++    N  ++ +V M F   ++ +     F +F     + ++F Y  +PET+G+T E++   F
Sbjct:  288 AVFYYSTGIFERAGIT---QPVYATIGAGVVNTVFTVVSLFLVERAGRRTLHLVGLGGMAVCAAVMTIALAL------KEKWIRYISIVATFGFVALFEIGPGPIPWFIVAELFSQGPRPAAMAVAGCSNWTSNFLVGMLF-PYAEKLCGPYVFLIFLVFLLIFFIFTYFKVPETKGRTFEDISRGF 464          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: GTR3_CANFA (Solute carrier family 2, facilitated glucose transporter member 3 OS=Canis familiaris GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 4.250e-16
Identity = 58/188 (30.85%), Postives = 94/188 (50.00%), Query Frame = -3
Query:  259 SLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGG-SFFLFASIASVAWVFFYPCLPETQGKTLEEMGALF 819
            ++F+Y  G F+ AG+   +E + AT+  G V T F +V+ FL+++ GRR L +  + GM      + I L + D  +    W   + I  +L +VAFF IG GPI     +E+     R    ++    N  ++ +V + F   S A  +G   F +F     V  VF +  +PET+G+T EE+   F
Sbjct:  287 AVFYYSTGIFKDAGV---EEPIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAVCSILMTISLLLKDNYN----WMSFVCIGAILVFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGCSNWTSNFLVGLLF--PSAAFYLGAYVFIIFTGFLIVFLVFTFFKVPETRGRTFEEITRAF 465          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: EDL14_ARATH (Sugar transporter ERD6-like 14 OS=Arabidopsis thaliana GN=At4g04750 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 4.250e-16
Identity = 59/188 (31.38%), Postives = 101/188 (53.72%), Query Frame = -3
Query:  259 FYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGM-IASLATLAIFLAVIDQSHKKVIWAVG---LAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALF 810
            FY    F   G++S    +L ++    V+ T  ++   L+D  GRR LLL S AGM +  LAT   F        K   W  G   +A+ +V+ Y   + +GMGPI  + +SEI P+ ++    ++  +V  ++S +V+ +F  L +  +  G+F +FA++  + +VF    +PET+GK+LEE+ + F
Sbjct:  294 FYTDTIFTSTGVSSDIGFILTSI----VQMTGGVLGVLLVDISGRRSLLLFSQAGMFLGCLATAISFFL-----QKNNCWETGTPIMALISVMVYFGSYGLGMGPIPWIIASEIYPVDVKGAAGTVCNLVTSISSWLVTYSFNFLLQWSST-GTFMMFATVMGLGFVFTAKLVPETKGKSLEEIQSAF 471          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: ARAE_KLEOX (Arabinose-proton symporter OS=Klebsiella oxytoca GN=araE PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 4.250e-16
Identity = 53/185 (28.65%), Postives = 95/185 (51.35%), Query Frame = -3
Query:  271 LFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQ--SHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWV-FFYPCLPETQGKTLEEM 816
            + +Y P  F+ AG T+ ++ ++AT+ VG        +A F +DK GR+P L    + M      L   L   D   +   + W   L++   +  +A +++   P+  +  SEI PLK R  G +     N V++ ++  TFL+L  AI   G+F+L+ ++ +VA++   +  +PET+  TLE +
Sbjct:  277 IMYYAPRIFKMAGFTTTEQQMVATLVVGLTFMFATFIAVFTVDKAGRKPALKIGFSVMAIGTLVLGYCLMQFDNGTASSGLSW---LSVGMTMMCIAGYAMSAAPVVWILCSEIQPLKCRDFGITCSTTTNWVSNMIIGATFLTLLDAIGAAGTFWLYTAL-NVAFIGVTFWLIPETKNVTLEHI 457          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: GTR8_RAT (Solute carrier family 2, facilitated glucose transporter member 8 OS=Rattus norvegicus GN=Slc2a8 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 5.550e-16
Identity = 62/229 (27.07%), Postives = 114/229 (49.78%), Query Frame = -3
Query:  259 PGRFVPIIVAARWFSFFPNRHPA*TSLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVI-----DQSHKKVIWAVG------------LAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALF 894
            PG   P+I+      F   +     ++ FY    FE+A    KD +L A+V VG ++  F  VA  ++D+ GR+ LL  S   M+ S++    +  +      + SH  ++  +             LA+ ++  ++A F++G GPI  +  SEI PL ++     + V+ N   + +V+  F S+ + +   G+F+L A+   ++ +F    +PET+G+TLE++ A F
Sbjct:  252 PGVHKPLIIGICLMVF--QQLSGVNAIMFYANTIFEEAKF--KDSSL-ASVTVGIIQVLFTAVAALIMDRAGRKLLLALSGVIMVFSMSAFGTYFKLTQSGPSNSSHVGLLVPISAEPADVHLGLAWLAVGSMCLFIAGFAVGWGPIPWLLMSEIFPLHIKGVATGVCVLTNWFMAFLVTKEFNSIMEILRPYGAFWLTAAFCILSVLFTLTFVPETKGRTLEQITAHF 475          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: EDL17_ARATH (Sugar transporter ERD6-like 17 OS=Arabidopsis thaliana GN=SFP1 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 5.550e-16
Identity = 55/179 (30.73%), Postives = 92/179 (51.40%), Query Frame = -3
Query:  271 YIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEM 807
            Y    F KAG +      + T  +G       ++   L+DK GRRPLL++S  GM  +   L +   +        +  + L+   V+ Y+A ++IG+G +  V  SEI P+ ++    SI  +V+  +S +V+  F  L +  T  G+FF+FA I   A +F +  +PET+G +LEE+
Sbjct:  288 YASTIFRKAGFSVA----IGTTMLGIFVIPKAMIGLILVDKWGRRPLLMTSAFGMSMTCMLLGVAFTLQKMQLLSELTPI-LSFICVMMYIATYAIGLGGLPWVIMSEIFPINIKVTAGSIVTLVSFSSSSIVTYAFNFLFEWST-QGTFFIFAGIGGAALLFIWLLVPETKGLSLEEI 460          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: ARAE_ECOLI (Arabinose-proton symporter OS=Escherichia coli (strain K12) GN=araE PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 5.550e-16
Identity = 52/185 (28.11%), Postives = 95/185 (51.35%), Query Frame = -3
Query:  271 LFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQ--SHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWV-FFYPCLPETQGKTLEEM 816
            + +Y P  F+ AG T+ ++ ++AT+ VG        +A F +DK GR+P L    + M      L   L   D   +   + W   L++   +  +A +++   P+  +  SEI PLK R  G +     N V++ ++  TFL+L  +I   G+F+L+ ++ ++A+V   +  +PET+  TLE +
Sbjct:  277 IMYYAPRIFKMAGFTTTEQQMIATLVVGLTFMFATFIAVFTVDKAGRKPALKIGFSVMALGTLVLGYCLMQFDNGTASSGLSW---LSVGMTMMCIAGYAMSAAPVVWILCSEIQPLKCRDFGITCSTTTNWVSNMIIGATFLTLLDSIGAAGTFWLYTAL-NIAFVGITFWLIPETKNVTLEHI 457          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: ARAE_ECO57 (Arabinose-proton symporter OS=Escherichia coli O157:H7 GN=araE PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 5.550e-16
Identity = 52/185 (28.11%), Postives = 95/185 (51.35%), Query Frame = -3
Query:  271 LFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQ--SHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWV-FFYPCLPETQGKTLEEM 816
            + +Y P  F+ AG T+ ++ ++AT+ VG        +A F +DK GR+P L    + M      L   L   D   +   + W   L++   +  +A +++   P+  +  SEI PLK R  G +     N V++ ++  TFL+L  +I   G+F+L+ ++ ++A+V   +  +PET+  TLE +
Sbjct:  277 IMYYAPRIFKMAGFTTTEQQMIATLVVGLTFMFATFIAVFTVDKAGRKPALKIGFSVMALGTLVLGYCLMQFDNGTASSGLSW---LSVGMTMMCIAGYAMSAAPVVWILCSEIQPLKCRDFGITCSTTTNWVSNMIIGATFLTLLDSIGAAGTFWLYTAL-NIAFVGITFWLIPETKNVTLEHI 457          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: STP9_ARATH (Sugar transport protein 9 OS=Arabidopsis thaliana GN=STP9 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 7.249e-16
Identity = 64/230 (27.83%), Postives = 104/230 (45.22%), Query Frame = -3
Query:  259 PWGGVFGKEVVGPFFPGRFVPIIVAARWFSFFPNRHPA*TSLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAV---IDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALF 939
            PW  +F +         ++ P +V      FF  +      + FY P  F+  G    D +L++ V  G V     LV+ + +D+ GRR L L     MI S   +   + +      S           ++ +  YVA F+   GP+  +  SEI PL++R  G +I V VN   + ++   FL++   +   G F+ F  + +V  VF Y  LPET+G  +EEMG ++
Sbjct:  272 PWKNIFQQ--------AKYRPALVFCSAIPFF-QQITGINVIMFYAPVLFKTLGFAD-DASLISAVITGAVNVVSTLVSIYAVDRYGRRILFLEGGIQMIVSQIVVGTLIGMKFGTTGSGTLTPATADWILAFICLYVAGFAWSWGPLGWLVPSEICPLEIRPAGQAINVSVNMFFTFLIGQFFLTMLCHMKF-GLFYFFGGMVAVMTVFIYFLLPETKGVPIEEMGRVW 490          
The following BLAST results are available for this feature:
BLAST of DY305550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
MYCT_MOUSE3.254e-1642.57Proton myo-inositol cotransporter OS=Mus musculus ... [more]
GTR3_CHICK3.254e-1630.48Solute carrier family 2, facilitated glucose trans... [more]
GTR3_CANFA4.250e-1630.85Solute carrier family 2, facilitated glucose trans... [more]
EDL14_ARATH4.250e-1631.38Sugar transporter ERD6-like 14 OS=Arabidopsis thal... [more]
ARAE_KLEOX4.250e-1628.65Arabinose-proton symporter OS=Klebsiella oxytoca G... [more]
GTR8_RAT5.550e-1627.07Solute carrier family 2, facilitated glucose trans... [more]
EDL17_ARATH5.550e-1630.73Sugar transporter ERD6-like 17 OS=Arabidopsis thal... [more]
ARAE_ECOLI5.550e-1628.11Arabinose-proton symporter OS=Escherichia coli (st... [more]
ARAE_ECO575.550e-1628.11Arabinose-proton symporter OS=Escherichia coli O15... [more]
STP9_ARATH7.249e-1627.83Sugar transport protein 9 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1BF05RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305550 ID=DY305550; Name=DY305550; organism=Citrus sinensis; type=EST; length=1259bp
GATTCATAATGCTTCATTTTCATTGCATAATGACTTCTTCAATCCCCCAT
TAGTGATCACCCCGCACACACCGCGACACAGTATTCATTTTAAAAAGCTA
TACCAAGATTTTAAAAACCATCGTATTTAATAAAATACCCTTCAGTTACC
GTTAGAAACCGGTCCTAACTGAACGTTACTCGCACCGTCACCGTTAATCC
CGTTGGCTTTGTTCCTCCTCCTCTCTCTCTTGGAATCCCTCACCCAACGG
AAATTACCAAAAAGCGCCCCCATCTCTTCAAGGGTTTTACCCTGCGTTTC
GGGGAGACACGGGTAAAAAAACACCCACGCAACTGATGCAATTGACGCGA
ATAAAAAGAAGGAGCCGCCAATCGTGATCGCTTTACTAAGCGATAGGAAA
GTCATCGATACAACCCCACTTGTGACCCTGTTCACCATCACCCCGATACT
CGCTCCCTGAGCGCGTAACTTCAACGGCAAAATCTCTGAACTGTAAACCA
TCGTGATGGGCCCCATCCCGATTGAGAAAAACGCCACGTAGGATAAAACC
GTTGAAATGGCCAAACCAACGGCCCAAATCACCTTTTTGTGTGACTGATC
GATGACTGCAAGAAAGATAGCAAGGGTCGCGAGCGAAGCGATCATGCCCG
CAACACTGCTCAAAAGCAACGGACGCCGTCCGATTTTGTCGAGTAAAAAC
GTAGCCACTAGGATGAAAGTGGTCTTGACAAATCCAACGGCTACAGTAGC
AAGTAAATTTTCGTCTTTTGACGTAATCCCAGCTTTTTCAAAGAATCCAG
GAATGTAAAAGAACAACGAAGTCTATGCCGGATGCCTGTTGGGAAAAAAT
GAAAACCAACGGGCTGCGACTATGATGGGGACAAAACGGCCGGGGAAGAA
CGGACCAACAACCTCTTTCCCAAACACCCCTCCCCACGGTGGAATTTTCG
GACATGAAAAAAAACCTCCCCTTGCCTTCTTCCAGAAAGGCCGGCGGGCT
TTTTTAAAACCGGAAAACTGAAACAAAAAAACCCCCCCTTTCAGCCCCAA
AAGTTTTTGCGAAAAAAATTTCTTTTGGTCCCGGCAAAATCCCCCCCTGG
TCCCCACCCCCCACCCGCGGGAAAAAAATTTGGGGGGGGGGGGAAAGCCC
CGCCCCAAGAGGGGGGGAAAAAAAAACAAAAGAGAGAGAAGGGGCGCCCC
AAAAAACTCCAAAAACACCATCACGGGCCCCCCCCCCCCCACACCAAGAT
AAAAGGAAG
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