DY305550

Overview
NameDY305550
Unique NameDY305550
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1259
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: STP11_ARATH (Sugar transport protein 11 OS=Arabidopsis thaliana GN=STP11 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 7.249e-16
Identity = 57/204 (27.94%), Postives = 94/204 (46.08%), Query Frame = -3
Query:  244 LFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVG-------------LAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALFGNFRW 816
            + FY P  F+  G    D +L++ V  G V     +V+ + +DK GRR L L     MI +   +   +           W  G             + ++ +  YVA F+   GP+  +  SEI PL++R+ G S+ V VN   +  +   FL++   +   G F+ FA +  +  +F Y  LPET+G  +EEMG ++   R+
Sbjct:  304 IMFYAPVLFKTIGF-GNDASLISAVITGLVNVLSTIVSIYSVDKFGRRALFLQGGFQMIVTQIAVGSMIG----------WKFGFNGEGNLSGVDADIILALICLYVAGFAWSWGPLGWLVPSEICPLEIRSAGQSLNVSVNMFFTFFIGQFFLTMLCHMKF-GLFYFFAGMVLIMTIFIYFLLPETKGVPIEEMGKVWKEHRY 495          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: MSSP1_ARATH (Monosaccharide-sensing protein 1 OS=Arabidopsis thaliana GN=MSSP1 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 7.249e-16
Identity = 57/193 (29.53%), Postives = 97/193 (50.26%), Query Frame = -3
Query:  277 LFFYIPGFFEKAGITSKDENLLATVAVGFVKTTF-------------ILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLE 816
            + +Y P   E+AG+    + LL+++ +  +  +F             I+VA  L+D  GRR LLL ++  +I SL  L I   +    H   +    L+   V+ Y  FF +G GPI  +  SEI P ++R    +I  MV  +   +V+ +   L  +I + G F ++A++  ++W+F Y  +PET+G  LE
Sbjct:  529 VLYYTPQILERAGV----DILLSSLGLSSISASFLISGLTTLLMLPAIVVAMRLMDVSGRRSLLLWTIPVLIVSLVVLVISELI----HISKVVNAALSTGCVVLYFCFFVMGYGPIPNILCSEIFPTRVRGLCIAICAMVFWIGDIIVTYSLPVLLSSIGLVGVFSIYAAVCVISWIFVYMKVPETKGMPLE 713          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: IOLT_BACSU (Major myo-inositol transporter iolT OS=Bacillus subtilis GN=iolT PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 7.249e-16
Identity = 52/183 (28.42%), Postives = 94/183 (51.37%), Query Frame = -3
Query:  271 SLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEM 819
            S+ +Y       +G  + +  L+  +A G +      V  +LL ++GRRP+L++ + G   +L  + IF  V++ S         + +S  ++++AF    + P+T +  SEI PL+LR  G  + V    + +  VS TF  L  AI +  +FF+F  +   + +F    LPET+G +LE++
Sbjct:  274 SIMYYGTEILRNSGFQT-EAALIGNIANGVISVLATFVGIWLLGRVGRRPMLMTGLIGTTTALLLIGIFSLVLEGSPALPY----VVLSLTVTFLAFQQGAISPVTWLMLSEIFPLRLRGLGMGVTVFCLWMVNFAVSFTFPILLAAIGLSTTFFIFVGLGICSVLFVKRFLPETKGLSLEQL 451          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: GTR4_BOVIN (Solute carrier family 2, facilitated glucose transporter member 4 OS=Bos taurus GN=SLC2A4 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 1.237e-15
Identity = 54/187 (28.88%), Postives = 97/187 (51.87%), Query Frame = -3
Query:  259 SLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALF 819
            ++F+Y    FE AG+   ++   AT+  G V T F LV+ FL+++ GRR L L  +AGM      + + L +++    +V     ++I  +  +VAFF IG GPI     +E+     R    ++    N   + ++ M F  ++ A+     F LFA +    ++F +  +PET+G+T +++ A+F
Sbjct:  305 AVFYYSTSIFESAGV---EKPAYATIGAGVVNTVFTLVSVFLVERAGRRTLHLLGLAGMCGCAILMTVALLLLE----RVPAMSYVSIVAIFGFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGFSNWTCNFIIGMGFQYVADAMG-PYVFLLFAVLLLGFFIFTFLKVPETRGRTFDQISAVF 483          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: GTR2_HUMAN (Solute carrier family 2, facilitated glucose transporter member 2 OS=Homo sapiens GN=SLC2A2 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.237e-15
Identity = 55/186 (29.57%), Postives = 93/186 (50.00%), Query Frame = -3
Query:  259 LFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALF 816
            +F+Y    F+ AGI+     + AT+ VG V   F  V+ FL++K GRR L L  ++GM      +++ L +++    K  W   +++  +  +V+FF IG GPI     +E      R    +I    N   + +V++ F  ++        FFLFA +     +F +  +PET+GK+ EE+ A F
Sbjct:  322 IFYYSTSIFQTAGISKP---VYATIGVGAVNMVFTAVSVFLVEKAGRRSLFLIGMSGMFVCAIFMSVGLVLLN----KFSWMSYVSMIAIFLFVSFFEIGPGPIPWFMVAEFFSQGPRPAALAIAAFSNWTCNFIVALCFQYIAD-FCGPYVFFLFAGVLLAFTLFTFFKVPETKGKSFEEIAAEF 499          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: STP7_ARATH (Sugar transport protein 7 OS=Arabidopsis thaliana GN=STP7 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.109e-15
Identity = 57/188 (30.32%), Postives = 93/188 (49.47%), Query Frame = -3
Query:  259 SLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVG-LAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALF 819
            S+ FY P  F+  G    + +L ++   G V      ++  L+D++GRR LL++    MI     +A+ L V    ++++      + +  +  +V  F    GP+     SEI PL+ R+ G SI V VN + + +++  FL L  A    G F  FA   +V  +F Y  LPET+G  +EEM  L+
Sbjct:  303 SILFYAPVLFQTMGFGG-NASLYSSALTGAVLVLSTFISIGLVDRLGRRALLITGGIQMIICQVIVAVILGVKFGDNQELSKGYSVIVVIFICLFVVAFGWSWGPLGWTIPSEIFPLETRSAGQSITVAVNLLFTFIIAQAFLGLLCAFKF-GIFLFFAGWVTVMTIFVYFLLPETKGVPIEEMTLLW 488          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: EDL10_ARATH (Sugar transporter ERD6-like 10 OS=Arabidopsis thaliana GN=At3g05160 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.755e-15
Identity = 53/186 (28.49%), Postives = 95/186 (51.08%), Query Frame = -3
Query:  265 TSLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGA 822
            + + +Y    F KAG + +    L ++  G       LV   L+D+ GRRPLLL+S  GM      + +   + + +       V + I+ +L Y  FF+IG+G +  +  SEI P+ ++    SI  + +  T   VS  F +     +  G+F++FA +  ++ +F +  +PET+G++LEE+ A
Sbjct:  273 SGITYYSNAIFRKAGFSER----LGSMIFGVFVIPKALVGLILVDRWGRRPLLLASAVGMSIGSLLIGVSFTLQEMNLFPEFIPVFVFIN-ILVYFGFFAIGIGGLPWIIMSEIFPINIKVSAGSIVALTSWTTGWFVSYGF-NFMFEWSAQGTFYIFAMVGGLSLLFIWMLVPETKGQSLEELQA 452          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: ARAE_BACSU (Arabinose-proton symporter OS=Bacillus subtilis GN=araE PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 3.598e-15
Identity = 54/187 (28.88%), Postives = 95/187 (50.80%), Query Frame = -3
Query:  259 SLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALF 819
            ++ +Y P  F+  G   ++   + T  VG V+  F ++A  L+DK+GR+ L       M    A +AIF+ +I  S    + +  + I  +L +VA F + +GPIT +  SEI P  LRA+ A I  +     +  +      +  +  +  +F++FA I  + ++F     PET+ K+LEE+  L+
Sbjct:  284 AITYYGPEIFKMMGF-GQNAGFVTTCIVGVVEVIFTVIAVLLIDKVGRKKL-------MSIGSAFMAIFMILIGTSFYFELTSGIMMIVLILGFVAAFCVSVGPITWIMISEIFPNHLRARAAGIATIFLWGANWAIGQFVPMMIDSFGLAYTFWIFAVINILCFLFVVTICPETKNKSLEEIEKLW 462          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: GTR3_MOUSE (Solute carrier family 2, facilitated glucose transporter member 3 OS=Mus musculus GN=Slc2a3 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 4.699e-15
Identity = 56/187 (29.95%), Postives = 91/187 (48.66%), Query Frame = -3
Query:  259 SLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALF 819
            ++F+Y  G F+ AG+    E + AT+  G V T F +V+ FL+++ GRR L +  + GM      + I L + D           + I  +L YVAFF IG GPI     +E+     R    ++    N  ++ +V M F S + A      F +FA+      +F +  +PET+G+T E++   F
Sbjct:  287 AVFYYSTGIFKDAGV---QEPIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAVCSVFMTISLLLKDDYEAMSF----VCIVAILIYVAFFEIGPGPIPWFIVAELFSQGPRPAAIAVAGCCNWTSNFLVGMLFPS-AAAYLGAYVFIIFAAFLIFFLIFTFFKVPETKGRTFEDIARAF 465          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: YD387_YEAST (Probable metabolite transport protein YDR387C OS=Saccharomyces cerevisiae GN=YDR387C PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 6.137e-15
Identity = 58/189 (30.69%), Postives = 89/189 (47.09%), Query Frame = -3
Query:  253 SLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALFGN 819
            +  +Y    F K  I +    LL  + +      F   A + +D +GRR +LL ++  M     T+ + L  +   H +V     L + +V+ YVA ++  MG +      E LPL  R+ GAS     N +T+  VSMT+LS    I    +  +FA     AW F Y   PE +G +LEE+G +F N
Sbjct:  368 AFMYYAAIIFSKFNIKNP---LLPPILIASTNFIFTFFAMYTMDSLGRRAILLRTILIM-----TVGLLLCSVGFGHDQV----NLLLISVVIYVAAYASAMGSVPWT-CVEFLPLNRRSFGASCIACTNWLTNAFVSMTYLSTINTIGDENTMLIFAFFTVCAWFFVYFWYPEVKGLSLEEVGRVFDN 543          
The following BLAST results are available for this feature:
BLAST of DY305550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
STP11_ARATH7.249e-1627.94Sugar transport protein 11 OS=Arabidopsis thaliana... [more]
MSSP1_ARATH7.249e-1629.53Monosaccharide-sensing protein 1 OS=Arabidopsis th... [more]
IOLT_BACSU7.249e-1628.42Major myo-inositol transporter iolT OS=Bacillus su... [more]
GTR4_BOVIN1.237e-1528.88Solute carrier family 2, facilitated glucose trans... [more]
GTR2_HUMAN1.237e-1529.57Solute carrier family 2, facilitated glucose trans... [more]
STP7_ARATH2.109e-1530.32Sugar transport protein 7 OS=Arabidopsis thaliana ... [more]
EDL10_ARATH2.755e-1528.49Sugar transporter ERD6-like 10 OS=Arabidopsis thal... [more]
ARAE_BACSU3.598e-1528.88Arabinose-proton symporter OS=Bacillus subtilis GN... [more]
GTR3_MOUSE4.699e-1529.95Solute carrier family 2, facilitated glucose trans... [more]
YD387_YEAST6.137e-1530.69Probable metabolite transport protein YDR387C OS=S... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAM1BF05RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305550 ID=DY305550; Name=DY305550; organism=Citrus sinensis; type=EST; length=1259bp
GATTCATAATGCTTCATTTTCATTGCATAATGACTTCTTCAATCCCCCAT
TAGTGATCACCCCGCACACACCGCGACACAGTATTCATTTTAAAAAGCTA
TACCAAGATTTTAAAAACCATCGTATTTAATAAAATACCCTTCAGTTACC
GTTAGAAACCGGTCCTAACTGAACGTTACTCGCACCGTCACCGTTAATCC
CGTTGGCTTTGTTCCTCCTCCTCTCTCTCTTGGAATCCCTCACCCAACGG
AAATTACCAAAAAGCGCCCCCATCTCTTCAAGGGTTTTACCCTGCGTTTC
GGGGAGACACGGGTAAAAAAACACCCACGCAACTGATGCAATTGACGCGA
ATAAAAAGAAGGAGCCGCCAATCGTGATCGCTTTACTAAGCGATAGGAAA
GTCATCGATACAACCCCACTTGTGACCCTGTTCACCATCACCCCGATACT
CGCTCCCTGAGCGCGTAACTTCAACGGCAAAATCTCTGAACTGTAAACCA
TCGTGATGGGCCCCATCCCGATTGAGAAAAACGCCACGTAGGATAAAACC
GTTGAAATGGCCAAACCAACGGCCCAAATCACCTTTTTGTGTGACTGATC
GATGACTGCAAGAAAGATAGCAAGGGTCGCGAGCGAAGCGATCATGCCCG
CAACACTGCTCAAAAGCAACGGACGCCGTCCGATTTTGTCGAGTAAAAAC
GTAGCCACTAGGATGAAAGTGGTCTTGACAAATCCAACGGCTACAGTAGC
AAGTAAATTTTCGTCTTTTGACGTAATCCCAGCTTTTTCAAAGAATCCAG
GAATGTAAAAGAACAACGAAGTCTATGCCGGATGCCTGTTGGGAAAAAAT
GAAAACCAACGGGCTGCGACTATGATGGGGACAAAACGGCCGGGGAAGAA
CGGACCAACAACCTCTTTCCCAAACACCCCTCCCCACGGTGGAATTTTCG
GACATGAAAAAAAACCTCCCCTTGCCTTCTTCCAGAAAGGCCGGCGGGCT
TTTTTAAAACCGGAAAACTGAAACAAAAAAACCCCCCCTTTCAGCCCCAA
AAGTTTTTGCGAAAAAAATTTCTTTTGGTCCCGGCAAAATCCCCCCCTGG
TCCCCACCCCCCACCCGCGGGAAAAAAATTTGGGGGGGGGGGGAAAGCCC
CGCCCCAAGAGGGGGGGAAAAAAAAACAAAAGAGAGAGAAGGGGCGCCCC
AAAAAACTCCAAAAACACCATCACGGGCCCCCCCCCCCCCACACCAAGAT
AAAAGGAAG
back to top