DY305550

Overview
NameDY305550
Unique NameDY305550
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1259
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: STP4_ARATH (Sugar transport protein 4 OS=Arabidopsis thaliana GN=STP4 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 6.137e-15
Identity = 61/219 (27.85%), Postives = 103/219 (47.03%), Query Frame = -3
Query:  259 RFVPIIVAARWFSFFPNRHPA*TSLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAV---------IDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALF 888
            R+ P ++   +  FF  +      + FY P  F+  G  SK  +LL+ +  G ++     V+ F +D+ GRR L L     M+ S   +   + V         I +S   +I      ++ +  YVA F+   GP+  +  SEI PL++R+   +I V VN   + +V+  FL++   +   G FF FA    +  +F Y  LPET+   +EEM  ++
Sbjct:  278 RYRPQLIMTCFIPFF-QQLTGINVITFYAPVLFQTLGFGSK-ASLLSAMVTGIIELLCTFVSVFTVDRFGRRILFLQGGIQMLVSQIAIGAMIGVKFGVAGTGNIGKSDANLI------VALICIYVAGFAWSWGPLGWLVPSEISPLEIRSAAQAINVSVNMFFTFLVAQLFLTMLCHMKF-GLFFFFAFFVVIMTIFIYLMLPETKNVPIEEMNRVW 487          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: STA_RICCO (Sugar carrier protein A OS=Ricinus communis GN=STA PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 8.015e-15
Identity = 63/185 (34.05%), Postives = 93/185 (50.27%), Query Frame = -3
Query:  271 LFFYIPGFFEKAGITSKDENLLATVAVGFV--KTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVG-LAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEM 816
            + FY P  F+  G    +  L ++   G V   +TFI +AT  +D++GRR LL+S    MI     +AI L V    ++++  +   L +  +  +V  F    GP+     SEI PL+ R+ G SI V VN   + V++ +F SL  A    G F  FA   +V   F Y  LPET+G  +EEM
Sbjct:  304 ILFYAPPLFQSMGFGG-NAALYSSAVTGAVLCSSTFISIAT--VDRLGRRFLLISGGIQMITCQVIVAIILGVKFGDNQQLSKSFSVLVVIMICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQSFPSLLCAFKF-GIFLFFAGWVTVMTAFVYIFLPETKGVPIEEM 484          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: GTR4_HUMAN (Solute carrier family 2, facilitated glucose transporter member 4 OS=Homo sapiens GN=SLC2A4 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 8.015e-15
Identity = 53/187 (28.34%), Postives = 96/187 (51.34%), Query Frame = -3
Query:  259 SLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALF 819
            ++F+Y    FE AG+    +   AT+  G V T F LV+  L+++ GRR L L  +AGM      + + L +++    +V     ++I  +  +VAFF IG GPI     +E+     R    ++    N  ++ ++ M F  +++A+     F LFA +    ++F +  +PET+G+T +++ A F
Sbjct:  305 AVFYYSTSIFETAGV---GQPAYATIGAGVVNTVFTLVSVLLVERAGRRTLHLLGLAGMCGCAILMTVALLLLE----RVPAMSYVSIVAIFGFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGFSNWTSNFIIGMGFQYVAEAMG-PYVFLLFAVLLLGFFIFTFLRVPETRGRTFDQISAAF 483          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: STP8_ARATH (Sugar transport protein 8 OS=Arabidopsis thaliana GN=STP8 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 1.047e-14
Identity = 58/193 (30.05%), Postives = 90/193 (46.63%), Query Frame = -3
Query:  244 SLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAV-IDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALFGNFRW 819
            ++ FY P  F+  G    D  LL+ V  G +      V  FL+DK GRR LLL S   M+     + I LA  +D +         + +  V  YV  F+   GP+  +  SE  PL+ R +G ++ V  N   + V++  FLS+  A+   G FF F+    V  +F    +PET+G ++++M        W
Sbjct:  298 AIMFYAPVLFQTVGF-GNDAALLSAVVTGTINVLSTFVGIFLVDKTGRRFLLLQSSVHMLICQLVIGIILAKDLDVTGTLARPQALVVVIFVCVYVMGFAWSWGPLGWLIPSETFPLETRTEGFALAVSCNMFFTFVIAQAFLSMLCAMK-SGIFFFFSGWIVVMGLFALFFVPETKGVSIDDMRDSVWKLHW 488          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: STP12_ARATH (Sugar transport protein 12 OS=Arabidopsis thaliana GN=STP12 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.047e-14
Identity = 61/208 (29.33%), Postives = 100/208 (48.08%), Query Frame = -3
Query:  208 LFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAV---IDQSHKKVI-WAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALF-GNFRWVRDSKRERRRNK 816
            + FY P  F+  G  S D  L++ V  G V     +V+ + +DK GRR L L     M+ S   +A  +     +D +   +  W   + +  +  YVA F+   GP+  +  SEI PL++R+   SI V VN + + +++  FL +   +   G F  FA    V  +F Y  LPET+G  +EEM  ++  ++ W +    E+   K
Sbjct:  300 IMFYAPVLFQTIGFGS-DAALISAVVTGLVNVGATVVSIYGVDKWGRRFLFLEGGFQMLISQVAVAAAIGAKFGVDGTPGVLPKWYAIVVVLFICIYVAAFAWSWGPLGWLVPSEIFPLEIRSAAQSITVSVNMIFTFLIAQVFLMMLCHLKF-GLFIFFAFFVVVMSIFVYLFLPETRGVPIEEMNRVWRSHWYWSKFVDAEKNLTK 505          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: GTR4_RAT (Solute carrier family 2, facilitated glucose transporter member 4 OS=Rattus norvegicus GN=Slc2a4 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.047e-14
Identity = 54/187 (28.88%), Postives = 95/187 (50.80%), Query Frame = -3
Query:  259 SLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALF 819
            ++F+Y    FE AG+   ++   AT+  G V T F LV+  L+++ GRR L L  +AGM      + + L +++    +V     ++I  +  +VAFF IG GPI     +E+     R    ++    N   + +V M F  ++ A+     F LFA +    ++F +  +PET+G+T +++ A F
Sbjct:  305 AVFYYSTSIFELAGV---EQPAYATIGAGVVNTVFTLVSVLLVERAGRRTLHLLGLAGMCGCAILMTVALLLLE----RVPSMSYVSIVAIFGFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGFSNWTCNFIVGMGFQYVADAMG-PYVFLLFAVLLLGFFIFTFLRVPETRGRTFDQISATF 483          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: GLF_ZYMMO (Glucose facilitated diffusion protein OS=Zymomonas mobilis GN=glf PE=3 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 1.047e-14
Identity = 53/192 (27.60%), Postives = 99/192 (51.56%), Query Frame = -3
Query:  271 SLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIW-AVG--LAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFL------SLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEM 819
            ++ +Y P  F+  G  + D  LL T+++G V   F ++A+ ++D+ GR+PLL+    GM A +A L               W  VG  L +++VL Y+A F +  GP+  V  SE+ P  ++     I V    + + +V+  F       +L++    G S+ +FA+++ +  +     +PET+G++L+E+
Sbjct:  286 AVLYYAPQMFQNLGFGA-DTALLQTISIGVVNFIFTMIASRVVDRFGRKPLLIWGALGMAAMMAVLGC-----------CFWFKVGGVLPLASVLLYIAVFGMSWGPVCWVVLSEMFPSSIKGAAMPIAVTGQWLANILVNFLFKVADGSPALNQTFNHGFSYLVFAALSILGGLIVARFVPETKGRSLDEI 465          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: GTR6_HUMAN (Solute carrier family 2, facilitated glucose transporter member 6 OS=Homo sapiens GN=SLC2A6 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 1.367e-14
Identity = 57/209 (27.27%), Postives = 104/209 (49.76%), Query Frame = -3
Query:  259 TSLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFL------------------AVIDQSHKKVIWAVGLAISTVLSYVAF---FSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALF 822
            T +  Y+   F+   +    ++  A V  G V+   +L+A   +D  GR+ LL  S A M A+  TL +++                  +  D +      A  L +  +L+ + F   +++G GPIT +  SE+LPL+ R   + + V+ + +T+ V++ +FL +     +   FF FA+I  V+ VF   C+PET+G++LE++ + F
Sbjct:  292 TPILVYLQSIFDSTAVLLPPKDDAAIV--GAVRLLSVLIAALTMDLAGRKVLLFVSAAIMFAANLTLGLYIHFGPRPLSPNSTAGLESESWGDLAQPLAAPAGYLTLVPLLATMLFIMGYAVGWGPITWLLMSEVLPLRARGVASGLCVLASWLTAFVLTKSFLPVVSTFGLQVPFFFFAAICLVSLVFTGCCVPETKGRSLEQIESFF 498          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: GTR4_MOUSE (Solute carrier family 2, facilitated glucose transporter member 4 OS=Mus musculus GN=Slc2a4 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 1.367e-14
Identity = 54/187 (28.88%), Postives = 94/187 (50.27%), Query Frame = -3
Query:  259 SLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALF 819
            ++F+Y    FE AG+    +   AT+  G V T F LV+  L+++ GRR L L  +AGM      + + L +++    +V     ++I  +  +VAFF IG GPI     +E+     R    ++    N   + +V M F  ++ A+     F LFA +    ++F +  +PET+G+T +++ A F
Sbjct:  305 AVFYYSTSIFESAGV---GQPAYATIGAGVVNTVFTLVSVLLVERAGRRTLHLLGLAGMCGCAILMTVALLLLE----RVPAMSYVSIVAIFGFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGFSNWTCNFIVGMGFQYVADAMG-PYVFLLFAVLLLGFFIFTFLKVPETRGRTFDQISAAF 483          
BLAST of DY305550 vs. ExPASy Swiss-Prot
Match: ERDL3_ARATH (Sugar transporter ERD6-like 3 OS=Arabidopsis thaliana GN=SUGTL2 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.367e-14
Identity = 55/223 (24.66%), Postives = 101/223 (45.29%), Query Frame = -3
Query:  250 KEVVGPFFPGRFVPIIVAARWFSFFPNRHPA*TSLFFYIPGFFEKAGITSKDENLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAIFLAVIDQSHKKVIWAVGLAISTVLSYVAFFSIGMGPITMVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLFASIASVAWVFFYPCLPETQGKTLEEMGALFGNF 918
            K  V   F  R+ P +V             + + L +Y+   F+K G  S   +++  V    +     L+   L++K+GRRPLLL+S  GM      L+             +  +   I  V+ +++ F++GMG +  +  SEI P+ ++    ++  + N     +V+  + +        G+F +F +I     VF Y  +PET+G+TLE++ A   +F
Sbjct:  253 KSRVMDLFQRRYAPSVVIGVGLMLLQQLSGS-SGLMYYVGSVFDKGGFPSSIGSMILAV----IMIPKALLGLILVEKMGRRPLLLASTGGMCFFSLLLSFSFCFRSYGMLDELTPIFTCIG-VVGFISSFAVGMGGLPWIIMSEIFPMNVKVSAGTLVTLANWSFGWIVAFAY-NFMLEWNASGTFLIFFTICGAGIVFIYAMVPETKGRTLEDIQASLTDF 468          
The following BLAST results are available for this feature:
BLAST of DY305550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
STP4_ARATH6.137e-1527.85Sugar transport protein 4 OS=Arabidopsis thaliana ... [more]
STA_RICCO8.015e-1534.05Sugar carrier protein A OS=Ricinus communis GN=STA... [more]
GTR4_HUMAN8.015e-1528.34Solute carrier family 2, facilitated glucose trans... [more]
STP8_ARATH1.047e-1430.05Sugar transport protein 8 OS=Arabidopsis thaliana ... [more]
STP12_ARATH1.047e-1429.33Sugar transport protein 12 OS=Arabidopsis thaliana... [more]
GTR4_RAT1.047e-1428.88Solute carrier family 2, facilitated glucose trans... [more]
GLF_ZYMMO1.047e-1427.60Glucose facilitated diffusion protein OS=Zymomonas... [more]
GTR6_HUMAN1.367e-1427.27Solute carrier family 2, facilitated glucose trans... [more]
GTR4_MOUSE1.367e-1428.88Solute carrier family 2, facilitated glucose trans... [more]
ERDL3_ARATH1.367e-1424.66Sugar transporter ERD6-like 3 OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1BF05RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305550 ID=DY305550; Name=DY305550; organism=Citrus sinensis; type=EST; length=1259bp
GATTCATAATGCTTCATTTTCATTGCATAATGACTTCTTCAATCCCCCAT
TAGTGATCACCCCGCACACACCGCGACACAGTATTCATTTTAAAAAGCTA
TACCAAGATTTTAAAAACCATCGTATTTAATAAAATACCCTTCAGTTACC
GTTAGAAACCGGTCCTAACTGAACGTTACTCGCACCGTCACCGTTAATCC
CGTTGGCTTTGTTCCTCCTCCTCTCTCTCTTGGAATCCCTCACCCAACGG
AAATTACCAAAAAGCGCCCCCATCTCTTCAAGGGTTTTACCCTGCGTTTC
GGGGAGACACGGGTAAAAAAACACCCACGCAACTGATGCAATTGACGCGA
ATAAAAAGAAGGAGCCGCCAATCGTGATCGCTTTACTAAGCGATAGGAAA
GTCATCGATACAACCCCACTTGTGACCCTGTTCACCATCACCCCGATACT
CGCTCCCTGAGCGCGTAACTTCAACGGCAAAATCTCTGAACTGTAAACCA
TCGTGATGGGCCCCATCCCGATTGAGAAAAACGCCACGTAGGATAAAACC
GTTGAAATGGCCAAACCAACGGCCCAAATCACCTTTTTGTGTGACTGATC
GATGACTGCAAGAAAGATAGCAAGGGTCGCGAGCGAAGCGATCATGCCCG
CAACACTGCTCAAAAGCAACGGACGCCGTCCGATTTTGTCGAGTAAAAAC
GTAGCCACTAGGATGAAAGTGGTCTTGACAAATCCAACGGCTACAGTAGC
AAGTAAATTTTCGTCTTTTGACGTAATCCCAGCTTTTTCAAAGAATCCAG
GAATGTAAAAGAACAACGAAGTCTATGCCGGATGCCTGTTGGGAAAAAAT
GAAAACCAACGGGCTGCGACTATGATGGGGACAAAACGGCCGGGGAAGAA
CGGACCAACAACCTCTTTCCCAAACACCCCTCCCCACGGTGGAATTTTCG
GACATGAAAAAAAACCTCCCCTTGCCTTCTTCCAGAAAGGCCGGCGGGCT
TTTTTAAAACCGGAAAACTGAAACAAAAAAACCCCCCCTTTCAGCCCCAA
AAGTTTTTGCGAAAAAAATTTCTTTTGGTCCCGGCAAAATCCCCCCCTGG
TCCCCACCCCCCACCCGCGGGAAAAAAATTTGGGGGGGGGGGGAAAGCCC
CGCCCCAAGAGGGGGGGAAAAAAAAACAAAAGAGAGAGAAGGGGCGCCCC
AAAAAACTCCAAAAACACCATCACGGGCCCCCCCCCCCCCACACCAAGAT
AAAAGGAAG
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