DY305546

Overview
NameDY305546
Unique NameDY305546
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1115
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305546 vs. ExPASy Swiss-Prot
Match: TSPY1_HUMAN (Testis-specific Y-encoded protein 1 OS=Homo sapiens GN=TSPY1 PE=1 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 4.891e-21
Identity = 59/193 (30.57%), Postives = 99/193 (51.30%), Query Frame = 1
Query:  163 SIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDNKLTKTFTFLDDDGSMKITATSIKWKEGMGIPNGVNHEKKGNKRPLAEESFFTWFSDTQEKDTIDGIQDEVAEIIKEDLWPNPLTYF 741
            ++E+L  +Q ELE +N +A +      +K    RKP  D+R  +I+S+P FW     +HP +  L+++ED+ +  Y+ SLEVE+ K       I   F  NPYF++  +TK +  ++        +T I+W     +      E    +   +  +FF WFSD     +     +++AEI+ +DLW NPL Y+
Sbjct:  108 ALEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVEEEKHPVHLCKIMLFFRSNPYFQNKVITKEY-LVNITEYRASHSTPIEWYPDYEV------EAYRRRHHNSSLNFFNWFSDHNFAGS-----NKIAEILCKDLWRNPLQYY 288          
BLAST of DY305546 vs. ExPASy Swiss-Prot
Match: TSPY2_HUMAN (Testis-specific Y-encoded protein 2 OS=Homo sapiens GN=TSPY2 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 6.387e-21
Identity = 59/193 (30.57%), Postives = 99/193 (51.30%), Query Frame = 1
Query:  163 SIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDNKLTKTFTFLDDDGSMKITATSIKWKEGMGIPNGVNHEKKGNKRPLAEESFFTWFSDTQEKDTIDGIQDEVAEIIKEDLWPNPLTYF 741
            ++E+L  +Q ELE +N +A +      +K    RKP  D+R  +I+S+P FW     +HP +  L+++ED+ +  Y+ SLEVE+ K       I   F  NPYF++  +TK +  ++        +T I+W     +      E    +   +  +FF WFSD     +     +++AEI+ +DLW NPL Y+
Sbjct:  108 ALEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVEEEKHRVHLCKIMLFFRSNPYFQNKVITKEY-LVNITEYRASHSTPIEWYPDYEV------EAYRRRHHNSSLNFFNWFSDHNFAGS-----NKIAEILCKDLWRNPLQYY 288          
BLAST of DY305546 vs. ExPASy Swiss-Prot
Match: TSPY1_BOVIN (Testis-specific Y-encoded protein 1 OS=Bos taurus GN=TSPY1 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 1.247e-16
Identity = 59/214 (27.57%), Postives = 103/214 (48.13%), Query Frame = 1
Query:  118 VEEENAEQ----IDSELVLSIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDNKLTKTFTFLDDDGSMKITATSIK--WKEGMGIPNGVNHEKKGNKRPLAEESFFTWFSDTQEKDTIDGIQDEVAEIIKEDLWPNPLTYF 741
            VEE+  E+     + + + +++ L  +Q EL    E+     ++  +K  + RK    +R+ II+ IP FW  A +SHP +  L+S++DQ    Y+  L+V+      S   + F+F  NPYF ++ + K + +LD  G     +T +   W    G P+         +R     +F  W S     ++     + +AEII ED+W +PL Y+
Sbjct:  107 VEEQGQERPGGPCERQELDALQALAALQVELSSEREQNRRAYVQFMRKNHQRRKRHLARRSTIIQGIPGFWAKAIMSHPQVSVLISDQDQDFLGYMMDLKVQVRSHPPSRCKLIFSFRDNPYFLNSVIIKEY-YLDITGYRARRSTPVHWFWDFERGAPS--------RRRDTRSLNFLNWLSGHNGPES-----NRIAEIISEDVWDDPLKYY 306          
BLAST of DY305546 vs. ExPASy Swiss-Prot
Match: YGNB_SCHPO (Putative nucleosome assembly protein C2D10.11C OS=Schizosaccharomyces pombe GN=SPBC2D10.11c PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 2.599e-14
Identity = 61/244 (25.00%), Postives = 107/244 (43.85%), Query Frame = 1
Query:  166 IEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKS-------------------------IPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDNKLTKTFTFLDD---DGSM---KITATSIKW-KEGMGIPNGVNHEKKGNKR---------PLAEESFFTWFSDTQ--EKDTIDGIQD---------EVAEIIKEDLWPNPLTYF 741
            I  L+ +Q + + I  E  +K+L++E KY +  +P++ +R +IIK                          IP+FWLT   +   +GE+++ ED+ + R LS +   +      GY + F F  N YF +  LTKT+ + DD    G           I W K    +   V  +K+ N++          +  +SFF +FS  Q  + ++ DG+ D         ++ E+ K+ + P  +  F
Sbjct:   95 ITALKGLQKDCDAIQYEFRQKMLDLETKYEKKYQPIFSRRAEIIKGVSEPVDDELDHEEEIFQNNLPDPKGIPEFWLTCLHNVFLVGEMITPEDENVLRSLSDIRFTNLSGDVHGYKLEFEFDSNDYFTNKILTKTYYYKDDLSPSGEFLYDHAEGDKINWIKPEKNLTVRVETKKQRNRKTNQTRLVRTTVPNDSFFNFFSPPQLDDDESDDGLDDKTELLELDYQLGEVFKDQIIPLAIDCF 338          
BLAST of DY305546 vs. ExPASy Swiss-Prot
Match: NPL1A_XENLA (Nucleosome assembly protein 1-like 1-A OS=Xenopus laevis GN=nap1l1-A PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 9.877e-14
Identity = 66/265 (24.91%), Postives = 110/265 (41.51%), Query Frame = 1
Query:  166 IEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDII------------------------------------------KSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDVKSGYSIT--FNFSPNPYFEDNKLTKTFTF-----------LDDDGSMKITATSIKWKEGMG-----IPNGVNHEKKGNKRPLAE----ESFFTWFS--DTQEKDTIDGIQD-------EVAEIIKEDLWPNPLTYF 741
            +  L+ +Q +  +I  +  E+V E+E+KY+ + +P++DKR+DII                                          K IP+FWLT F +   L ++L E D+ I ++L  ++V+ F D     S T  F F PN +F +  LTKT+              D    M  T   I WK+G       I     H+ +G  R + +    +SFF +F+  +  E   +D   +       E+   ++E + P  + YF
Sbjct:   79 VNALKNLQVKCAQIEAKFYEEVHELERKYAALYQPLFDKRSDIINATYEPTEEECEWKVEEEDISGDLKEKAKLEEEKKDEEKEDPKGIPEFWLTVFKNVDLLSDMLQEHDEPILKHLKDIKVK-FSDAGQPMSFTLEFYFEPNEFFTNEVLTKTYKMRSEPDESDPFSFDGPEIMGCTGCLIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVPNDSFFNFFTPPEVPENGELDDDAEAILTADFEIGHFLRERIIPRSVLYF 342          
BLAST of DY305546 vs. ExPASy Swiss-Prot
Match: NP1L1_XENTR (Nucleosome assembly protein 1-like 1 OS=Xenopus tropicalis GN=nap1l1 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.685e-13
Identity = 65/266 (24.44%), Postives = 111/266 (41.73%), Query Frame = 1
Query:  166 IEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDII-------------------------------------------KSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDVKSGYSIT--FNFSPNPYFEDNKLTKTFTF-----------LDDDGSMKITATSIKWKEGMG-----IPNGVNHEKKGNKRPLAE----ESFFTWFS--DTQEKDTIDGIQD-------EVAEIIKEDLWPNPLTYF 741
            +  L+ +Q +  +I  +  E+V E+E+KY+ + +P++DKR+DII                                           K IP+FWLT F +   L +++ E D+ I ++L  ++V+ F +     S T  F+F PN +F +  LTKT+              D    M  T   I WK+G       I     H+ +G  R + +    +SFF +FS  +  E   +D   +       E+   ++E + P  + YF
Sbjct:   79 VNALKNLQVKCAQIEAKFYEEVHELERKYAALYQPLFDKRSDIINATYEPTEEECEWKVDEEEDISGDLKDKAKLEEEKKDEEKEDPKGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVK-FSEAGQPMSFTLEFHFEPNDFFTNEVLTKTYKMRSEPDESDPFSFDGPEIMGCTGCLIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVPNDSFFNFFSPPEVPENGELDDDAEAILTADFEIGHFLRERIIPRSVLYF 343          
BLAST of DY305546 vs. ExPASy Swiss-Prot
Match: NP1L1_HUMAN (Nucleosome assembly protein 1-like 1 OS=Homo sapiens GN=NAP1L1 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.874e-13
Identity = 58/216 (26.85%), Postives = 98/216 (45.37%), Query Frame = 1
Query:  190 DELEKINEEASEKV-LEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDV--KSGYSITFNFSPNPYFEDNKLTKTFTF-----------LDDDGSMKITATSIKWKEGMGIPNGVNHEKKGNK---------RPLAEESFFTWFSDTQEKDTIDGIQD---------EVAEIIKEDLWPNPLTYF 741
            DE ++I+EE  EK  +E E+K  E   P         K IP+FWLT F +   L +++ E D+ I ++L  ++V+ F D      + + F+F PN YF +  LTKT+              D    M  T   I WK+G  +      +K+ +K         + ++ +SFF +F+  +  ++ D   D         E+   ++E + P  + YF
Sbjct:  137 DEEDEISEELKEKAKIEDEKKDEEKEDP---------KGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVK-FSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNFFAPPEVPESGDLDDDAEAILAADFEIGHFLRERIIPRSVLYF 342          
BLAST of DY305546 vs. ExPASy Swiss-Prot
Match: NP1L1_BOVIN (Nucleosome assembly protein 1-like 1 OS=Bos taurus GN=NAP1L1 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.753e-13
Identity = 58/216 (26.85%), Postives = 98/216 (45.37%), Query Frame = 1
Query:  190 DELEKINEEASEKV-LEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDV--KSGYSITFNFSPNPYFEDNKLTKTFTF-----------LDDDGSMKITATSIKWKEGMGIPNGVNHEKKGNK---------RPLAEESFFTWFSDTQEKDTIDGIQD---------EVAEIIKEDLWPNPLTYF 741
            DE ++I+EE  EK  +E E+K  E   P         K IP+FWLT F +   L +++ E D+ I ++L  ++V+ F D      + + F+F PN YF +  LTKT+              D    M  T   I WK+G  +      +K+ +K         + ++ +SFF +F+  +  ++ D   D         E+   ++E + P  + YF
Sbjct:  137 DEEDEISEELKEKAKVEDEKKDEEKEDP---------KGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVK-FSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNFFAPPEVPESGDLDDDSEAILAADFEIGHFLRERIIPRSVLYF 342          
BLAST of DY305546 vs. ExPASy Swiss-Prot
Match: NP1L1_MOUSE (Nucleosome assembly protein 1-like 1 OS=Mus musculus GN=Nap1l1 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 4.902e-13
Identity = 57/216 (26.39%), Postives = 97/216 (44.91%), Query Frame = 1
Query:  190 DELEKINEEASEKV-LEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDV--KSGYSITFNFSPNPYFEDNKLTKTFTF-----------LDDDGSMKITATSIKWKEGMGIPNGVNHEKKGNK---------RPLAEESFFTWFSDTQEKDTIDGIQD---------EVAEIIKEDLWPNPLTYF 741
            DE ++++EE  EK  +E E+K  E   P         K IP+FWLT F +   L +++ E D+ I ++L  ++V+ F D      + + F+F PN YF +  LTKT+              D    M  T   I WK+G  +      +K+ +K         + ++ +SFF +F+  +  +  D   D         E+   ++E + P  + YF
Sbjct:  137 DEEDEVSEELKEKAKIEDEKKDEEKEDP---------KGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVK-FSDAGQPMSFVLEFHFEPNDYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNFFAPPEVPENGDLDDDAEAILAADFEIGHFLRERIIPRSVLYF 342          
BLAST of DY305546 vs. ExPASy Swiss-Prot
Match: YO48_SCHPO (Putative nucleosome assembly protein C36B7.08c OS=Schizosaccharomyces pombe GN=SPBC36B7.08c PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 8.362e-13
Identity = 54/199 (27.14%), Postives = 95/199 (47.74%), Query Frame = 1
Query:  190 DELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAF-ISHPALGELLSEEDQKIFRYLSSLEVEDFKDVK-SGYSITFNFSPNPYFEDNKLT-------KTFTFLDDDG-SMKIT-----ATSIKWKEGMGIPNGVNHEKKGNKRPLAEESFFTWFSDTQEKDTIDGIQDEVAEIIKEDLWPNPLTYF 741
            + L  + +E  +  +E+ +K +E+ +P++++R DI+K+I +FW+     +   + + ++ ED  +   L ++ VE F + +     I+  F PN Y +D+ LT       K     DD+G   KIT        I WK G  +       +K  K P     +F W  + +E D  DG    +   + EDL+PN + YF
Sbjct:    8 ENLANLEQEFGKAEIEILKKQNELFQPLFEQRRDILKTINNFWVVVLEAAGDEISQYITPEDSVLLEKLENIYVERFNEKEPRDVRISLTFQPNEYLQDDNLTLVKEVRIKEEKAKDDEGLEKKITKYTSQPVDIHWKPGKSL------FRKNKKLPPNFFDYFQWTGE-EEDDDFDGA--TLTIFLAEDLFPNAVKYF 197          
The following BLAST results are available for this feature:
BLAST of DY305546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
TSPY1_HUMAN4.891e-2130.57Testis-specific Y-encoded protein 1 OS=Homo sapien... [more]
TSPY2_HUMAN6.387e-2130.57Testis-specific Y-encoded protein 2 OS=Homo sapien... [more]
TSPY1_BOVIN1.247e-1627.57Testis-specific Y-encoded protein 1 OS=Bos taurus ... [more]
YGNB_SCHPO2.599e-1425.00Putative nucleosome assembly protein C2D10.11C OS=... [more]
NPL1A_XENLA9.877e-1424.91Nucleosome assembly protein 1-like 1-A OS=Xenopus ... [more]
NP1L1_XENTR1.685e-1324.44Nucleosome assembly protein 1-like 1 OS=Xenopus tr... [more]
NP1L1_HUMAN2.874e-1326.85Nucleosome assembly protein 1-like 1 OS=Homo sapie... [more]
NP1L1_BOVIN3.753e-1326.85Nucleosome assembly protein 1-like 1 OS=Bos taurus... [more]
NP1L1_MOUSE4.902e-1326.39Nucleosome assembly protein 1-like 1 OS=Mus muscul... [more]
YO48_SCHPO8.362e-1327.14Putative nucleosome assembly protein C36B7.08c OS=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1BE10RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305546 ID=DY305546; Name=DY305546; organism=Citrus sinensis; type=EST; length=1115bp
GGTTTTAGGCACTCGTCGAGCGAGCGAGTTAGGGTTATTTAATTTTTATT
TTATTTGTTTGTTATTTTAATAGCTACCAAGAGCAAAATGGTGGCAGACA
AGGGCAAAAAAACCAAAGTTGAAGAAGAAAACGCAGAGCAAATTGACTCA
GAACTTGTTCTTTCCATCGAGAAACTCCAAGAGATCCAAGACGAGCTTGA
AAAGATTAACGAAGAGGCAAGCGAGAAAGTCTTGGAGGTTGAGCAGAAAT
ACAGTGAGATACGCAAGCCAGTCTATGATAAGCGAAATGATATCATCAAA
TCCATACCTGACTTCTGGTTAACTGCCTTTATTAGTCATCCTGCTCTCGG
TGAACTTTTGAGTGAAGAGGATCAGAAGATATTCAGGTACTTGAGCTCTC
TGGAAGTGGAGGATTTTAAAGATGTCAAATCAGGATACTCCATCACATTT
AACTTCTCCCCCAATCCCTATTTTGAAGATAACAAACTTACCAAGACTTT
CACCTTCCTTGATGATGATGGTTCAATGAAAATTACTGCTACATCAATCA
AGTGGAAAGAGGGCATGGGCATACCAAATGGAGTTAATCATGAGAAGAAA
GGAAACAAGCGGCCATTGGCGGAAGAAAGCTTCTTTACCTGGTTCAGTGA
TACCCAAGAGAAGGATACTATTGATGGTATCCAAGATGAGGTTGCAGAGA
TTATCAAGGAGGATTTATGGCCCAATCCTCTCACTTATTTTAACAATGAA
GCTGATGAAGAGGAGTTTGAAGGCGATGAAGAGGGTAAAGAAGATGATGA
CTCTGAAGATGATGAAGATGATCAAGAGGAAGATGATGATGATGAAGACG
GTGATGATGAAGGCAACTGAGTTATCTTCATCCTAATCCGATATCAGCTT
ATGTTAAATGTCCTTGCTTCGGTAAACTTTGGTGTAAAGTGGTTTTCTGT
GGTTTGCTCAGTAGGGTGACAAGGGAAGGGCAACCACTTCAACTCTTATG
AATACCTTTTTTGGCTAGTGGGAAGGCCACCGAACGAAATCGGTTTCCTT
TTATTTTAGGGCCCTTTTCCGGGGTTCCCGGGGGTTTAATTTTGGGAGAT
TTCCCCCCCTTATCT
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