DY305546
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305546 vs. ExPASy Swiss-Prot
Match: NP1L1_PONAB (Nucleosome assembly protein 1-like 1 OS=Pongo abelii GN=NAP1L1 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.426e-12 Identity = 56/215 (26.05%), Postives = 96/215 (44.65%), Query Frame = 1 Query: 190 DELEKINEEASEKV-LEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVE-DFKDVKSGYSITFNFSPNPYFEDNKLTKTFTF-----------LDDDGSMKITATSIKWKEGMGIPNGVNHEKKGNK---------RPLAEESFFTWFSDTQEKDTIDGIQD---------EVAEIIKEDLWPNPLTYF 741 DE ++I+EE EK +E E+K E P K IP+FWLT F + L +++ E D+ I ++L ++V+ + + F+F PN YF + LTKT+ D M T I WK+G + +K+ +K + ++ +SFF +F+ + ++ D D E+ ++E + P + YF Sbjct: 137 DEEDEISEELKEKAKIEDEKKDEEKEDP---------KGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVKFSGAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNFFAPPEVPESGDLDDDAEAILAADFEIGHFLRERIIPRSVLYF 342
BLAST of DY305546 vs. ExPASy Swiss-Prot
Match: NPL1B_XENLA (Nucleosome assembly protein 1-like 1-B OS=Xenopus laevis GN=nap1l1-B PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.863e-12 Identity = 62/266 (23.31%), Postives = 110/266 (41.35%), Query Frame = 1 Query: 166 IEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDII-------------------------------------------KSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDV--KSGYSITFNFSPNPYFEDNKLTKTFTF-----------LDDDGSMKITATSIKWKEGMG-----IPNGVNHEKKGNKRPLAE----ESFFTWFS--DTQEKDTIDGIQD-------EVAEIIKEDLWPNPLTYF 741 + L+ +Q + +I + E+V E+E+KY+ + +P ++KR+DII K IP+FWLT F + L +++ E D+ I ++L ++V+ F + + + F+F PN +F + LTKT+ D M T I WK+G I H+ +G R + + +SFF +FS + E +D + E+ ++E + P + YF Sbjct: 79 VNALKNLQVKCAQIEAKFYEEVHELERKYAALYQPFFEKRSDIINASYEPTEEECEWKVDEEEDIAEDLKEKAKLEEEKKDEEKEDPKGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVK-FSEAGQPMNFMLEFHFEPNEFFTNELLTKTYKMRSEPDESDPFSFDGPEIMGCTGCLIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVPNDSFFNFFSPPEVPENGELDDDAEAILTADFEIGHFLRERIIPRSVLYF 343
BLAST of DY305546 vs. ExPASy Swiss-Prot
Match: YCO6_SCHPO (Putative nucleosome assembly protein C364.06 OS=Schizosaccharomyces pombe GN=SPCC364.06 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.433e-12 Identity = 54/279 (19.35%), Postives = 113/279 (40.50%), Query Frame = 1 Query: 103 GKKTKVEEENAEQIDSELVLSIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDII---------------------------------------KSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDNKLTKTFTFLDDDGSMKI------TATSIKWKEGMGIPNGVNHEKKGNKR---------PLAEESFFTWF------------SDTQEKDTIDGIQDEVAEIIKEDLWPNPLTYF 741 G + E ++ + I L+ +Q + + +++ E+E+ Y++ P++ +R++++ K IP+FWLTA + +L E+++ ED+ +L + + + K G+ + F F+ NP+F + LTKT+ ++++ G + + WKE + +K+ NK + +SFF +F S++ E D + + ++ E KE L P + +F Sbjct: 58 GSLLHLTSEGVSELPEAVQRRISGLRGLQKRYSDLESQFQKELFELEKAYAKKYAPIFKRRSEVVRGADEPTEEEIKKGEAADENEKKEPTSSESKKQEGGDDTKGIPEFWLTAMKNVLSLSEMITPEDEGALSHLVDIRISYME--KPGFKLEFEFAENPFFTNKILTKTYYYMEESGPSNVFLYDHAEGDKVDWKENADLTVRTVTKKQRNKNTKQTRVVKVSVPRDSFFNFFNPPTPPSEEDEESESPELDELLELDYQIGEDFKEKLIPRAVEWF 334
BLAST of DY305546 vs. ExPASy Swiss-Prot
Match: NP1L1_RAT (Nucleosome assembly protein 1-like 1 OS=Rattus norvegicus GN=Nap1l1 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 4.150e-12 Identity = 57/216 (26.39%), Postives = 97/216 (44.91%), Query Frame = 1 Query: 190 DELEKINEEASEKV-LEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDV--KSGYSITFNFSPNPYFEDNKLTKTFTF-----------LDDDGSMKITATSIKWKEGMGIPNGVNHEKKGNK---------RPLAEESFFTWFSDTQEKDTIDGIQD---------EVAEIIKEDLWPNPLTYF 741 DE ++++EE EK +E E+K E P K IP+FWLT F + L +++ E D+ I ++L ++V+ F D + + F+F PN YF + LTKT+ D M T I WK+G + +K+ +K + +++ SFF +F+ + + D D E+ ++E + P + YF Sbjct: 137 DEEDEVSEELKEKAKIEDEKKDEEKEDP---------KGIPEFWLTVF-KNDLLSDMVQEHDEPILKHLKDIKVK-FSDAGQPMSFILEFHFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSKTSFFNFFAPPEVPENGDLDDDXEAILAADFEIGHFLRERIIPRSVLYF 341
BLAST of DY305546 vs. ExPASy Swiss-Prot
Match: NAP1_DICDI (Probable nucleosome assembly protein OS=Dictyostelium discoideum GN=nap1 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 5.420e-12 Identity = 58/248 (23.39%), Postives = 113/248 (45.56%), Query Frame = 1 Query: 148 SELVLSIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDII----------------------------KSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDNKLTKTFTFLDDDGSMKITATSIKWKEGMGIPNGVNHEKKGNK-RPLAEES--------------FFTWF-------SDTQEKDTIDGIQDEVAEIIKEDLWPNPLTYF 741 +E++ + L +QD ++ E+ +++LE+E+KY + +P+ +KR +I+ K IP FWL + + + +++ E D + YL +++ D + YS+ F+FS NP+F + ++KT +D+ +I +T I WK+G V +KK K +P ++ FF+ F + +E D I IQ ++ +K+ + P + +F Sbjct: 21 TEVLDRVNALLTLQDTQNELTEQMEKEILEIEKKYLKKFQPLAEKRFEIVSGKVEPTKEDQQCKAPIQVENLKSVPTDKGIPKFWLHV-LQNTEVKDIIEECDIEALEYLVDIKIVQVGDAQD-YSLDFHFSENPFFTNTVISKTVKLEEDNELNEIVSTPINWKDGKNFT--VQSKKKTVKSKPTKGKAATTTSTTVQEVVPCFFSTFVSPNQDPTSDEEADEIMYIQYQIIAKLKDIVIPEAVNFF 264 The following BLAST results are available for this feature:
BLAST of DY305546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY305546 ID=DY305546; Name=DY305546; organism=Citrus sinensis; type=EST; length=1115bpback to top |