DY305540

Overview
NameDY305540
Unique NameDY305540
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1253
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305540 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 5.666e-37
Identity = 92/220 (41.82%), Postives = 126/220 (57.27%), Query Frame = 2
Query:    2 VKLLKTWSSPFGLRAFWILKLKGVQFDFIDEDLSNKSPLLLQSNPVYKKVPVLIHNGKPISESLIILEYVDETWKQNP--LLPEDPYERARARFWAKFGDDKVLASIWNAFIKQGKEQEEAIGLAIETLKFLEEELKGKRFFGGEKIGLPDLALGWLANLIGVFE-----EVIGVKLIEKERFPLLSAWMQEFAEAPVIKESWPPHEKLVTKFRAMREPY 640
            V LL  W S FG+R    L  K +++++ +EDL NKSPLLLQ NP++KK+PVLIHNGKPI ES+I +EY++E WK     LLP DPY+RA+ARFWA + D K+       +  +G+EQE A    IE LK LE  L  K +FGGE  G  D+A      LIG +      E  G    E E  P   AW +   +   + +S P   K++   + +R+ +
Sbjct:    6 VILLDFWPSMFGMRLRIALAEKEIKYEYKEEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPNLLPSDPYDRAQARFWADYIDKKLYDFGRKLWTTKGEEQEAAKKDFIECLKVLEGALGDKPYFGGESFGFVDIA------LIGYYSWFYAYETFGNFSTEAE-CPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLRQKF 218          
BLAST of DY305540 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 2.153e-36
Identity = 89/215 (41.40%), Postives = 124/215 (57.67%), Query Frame = 2
Query:    2 VKLLKTWSSPFGLRAFWILKLKGVQFDFIDEDLSNKSPLLLQSNPVYKKVPVLIHNGKPISESLIILEYVDETWKQN--PLLPEDPYERARARFWAKFGDDKVLASIWNAFIKQGKEQEEAIGLAIETLKFLEEELKGKRFFGGEKIGLPDLALGWLANLIGVFEEVIGVKLIEKERFPLLSAWMQEFAEAPVIKESWPPHEKLVTKFRAMREPY 640
            V LL  W S FG+R    L  K +++++  EDL NKSPLLLQ NP++KK+PVLIHNGKPI ES+I +EY++E WK     LLP DPY+RA+ARFWA + D K+       +  +G+EQE A    IE LK LE  L  + +FGGE  G  D+AL    +    + E  G    E E  P   AW +   +   + +S P   K++   + +R+ +
Sbjct:    6 VILLDFWPSMFGMRLRIALAEKEIKYEYKQEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPSLLPSDPYDRAQARFWADYIDKKLYDFGRKLWATKGEEQEAAKKDFIECLKVLEGALGDRPYFGGESFGFVDIALIGFYSWFYAY-ETFGNFSTEAE-CPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLRQKF 218          
BLAST of DY305540 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSJ (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. japonica GN=GSTU1 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.158e-28
Identity = 81/222 (36.49%), Postives = 121/222 (54.50%), Query Frame = 2
Query:    8 LLKTWSSPFGLRAFWILKLKGVQFDFIDEDLSNKSPLLLQSNPVYKKVPVLIHNGKPISESLIILEYVDETWKQNP-LLP-------EDPYERARARFWAKFGDDKVLASIWNAFIKQGKEQEEAIGLAIETLKFLEEELKGKRFF---GGEKIGLPDLALGWLANLIGVFEEVIGVKLIEKERFPLLSAWMQEFAEAPVIKESWPPHEKLVTKFRAMREPY 640
            LL  W SPFG R    +  KG++F++ +EDL NKS LLL+SNPV++K+PVL+H G+P+SESL+IL+Y+D+ +   P LLP       +  Y RA ARFWA + D K+       +  +G+ Q  A     E L+ LE EL  + FF   GG ++G  D+AL         +E   G  +  +E  P L+AW +       + +  P  EK+      +++ Y
Sbjct:    9 LLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLPPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSV--EEVAPRLAAWARRCGRIDSVVKHLPSPEKVYDFVGVLKKKY 228          
BLAST of DY305540 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSI (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. indica GN=GSTU1 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 4.808e-28
Identity = 79/222 (35.59%), Postives = 119/222 (53.60%), Query Frame = 2
Query:    8 LLKTWSSPFGLRAFWILKLKGVQFDFIDEDLSNKSPLLLQSNPVYKKVPVLIHNGKPISESLIILEYVDETWKQNPLL--------PEDPYERARARFWAKFGDDKVLASIWNAFIKQGKEQEEAIGLAIETLKFLEEELKGKRFF---GGEKIGLPDLALGWLANLIGVFEEVIGVKLIEKERFPLLSAWMQEFAEAPVIKESWPPHEKLVTKFRAMREPY 640
            LL  W SPFG R    +  KG++F++ +EDL NKS LLL+SNPV++K+PVL+H G+P+SESL+IL+Y+D+ +   P L         +  Y RA ARFWA + D K+       +  +G+ Q  A     E L+ LE EL  + FF   GG ++G  D+AL         +E   G  +  +E  P L+AW +       + +  P  EK+      +++ Y
Sbjct:    9 LLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLSPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSV--EEVAPRLAAWARRCGRIDSVAKHLPSPEKVYDFVGVLKKKY 228          
BLAST of DY305540 vs. ExPASy Swiss-Prot
Match: GSTX2_MAIZE (Probable glutathione S-transferase BZ2 OS=Zea mays GN=BZ2 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 3.445e-26
Identity = 81/214 (37.85%), Postives = 111/214 (51.87%), Query Frame = 2
Query:   26 SPFGLRAFWILKLKGVQFDFIDEDLS-NKSPLLLQSNPVYKKVPVLI-HNGKPISESLIILEYVDETWKQNP-------LLPEDPYERARARFWAKFGDDKV--------LASIWNAFIKQGKEQEEAIGLAIETLKFLEEELKGKRFFGGEKI--GLPDLALGWLANLIGVFEEVIGVKLIEKERFPLLSAWMQEFAEAPVIKESWPPHEKLV 610
            SPF  RA   L L+GV ++ +DE L   KS  LL +NPVY K+PVL+  +G+ I ES +I++Y+++  +++        LLP+DPYERA  RFW  F DDK         LA    A  +  ++   A+ L  E  K   +   G+ FF G     GL DLALG     +   E + G+ LI+    PLL  W Q FA  P  K   P  EK+V
Sbjct:    9 SPFTARARLALDLRGVAYELLDEPLGPKKSDRLLAANPVYGKIPVLLLPDGRAICESAVIVQYIEDVARESGGAEAGSLLLPDDPYERAMHRFWTAFIDDKFWPALDAVSLAPTPGARAQAAEDTRAALSLLEEAFK---DRSNGRAFFSGGDAAPGLLDLALGCFLPALRACERLHGLSLIDASATPLLDGWSQRFAAHPAAKRVLPDTEKVV 219          
BLAST of DY305540 vs. ExPASy Swiss-Prot
Match: GSTO1_RAT (Glutathione S-transferase omega-1 OS=Rattus norvegicus GN=Gsto1 PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 6.740e-14
Identity = 64/190 (33.68%), Postives = 96/190 (50.53%), Query Frame = 2
Query:   29 PFGLRAFWILKLKGVQFDFIDEDLSNKSPLLLQSNPVYKKVPVLIHN-GKPISESLIILEYVDETWKQNPLLPEDPYERARARFWAKFGDDKVLASIWNAFIKQGKEQEEAIGLAIETLK---FLEEELKGKR--FFGGEKIGLPD-LALGWLANLIGVFEEVIGVKLIE-KERFPLLSAWMQEFAEAPV 574
            PF  R   +LK KG++ + I+ +L NK     + NP +  VPVL +  G  I+ES+I  EY+DE + +  L P+DPYE+A  +    F     + S+  +FI+  K +E+  G+  E  K    LEE +  KR  FFGG  + + D L   W       F+ +  ++L E  +  P L  WM    E PV
Sbjct:   33 PFAQRTLMVLKAKGIRHEIININLKNKPEWFFEKNP-FGLVPVLENTQGHLITESVITCEYLDEAYPEKKLFPDDPYEKACQKM--TFELFSKVPSLVTSFIR-AKRKEDHPGIKEELKKEFSKLEEAMANKRTAFFGGNSLSMIDYLIWPW-------FQRLEALELNECIDHTPKLKLWMATMQEDPV 211          
BLAST of DY305540 vs. ExPASy Swiss-Prot
Match: GSTO1_HUMAN (Glutathione S-transferase omega-1 OS=Homo sapiens GN=GSTO1 PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 1.961e-13
Identity = 66/191 (34.55%), Postives = 96/191 (50.26%), Query Frame = 2
Query:   29 PFGLRAFWILKLKGVQFDFIDEDLSNKSPLLLQSNPVYKKVPVLIHN-GKPISESLIILEYVDETWKQNPLLPEDPYERARARFWAKFGDDKVLASIWNAFIKQGKEQEEAIGLAIETLK---FLEEELKGKR--FFGGEKIGLPD-LALGWLANLIGVFEEVIGVKLIE-KERFPLLSAWMQEFAEAPVI 577
            PF  R   +LK KG++ + I+ +L NK     + NP +  VPVL ++ G+ I ES I  EY+DE +    LLP+DPYE+A  +   +      + S+  +FI+  + +E+  GL  E  K    LEE L  K+  FFGG  I + D L   W       FE +  +KL E  +  P L  WM    E P +
Sbjct:   33 PFAERTRLVLKAKGIRHEVININLKNKPEWFFKKNP-FGLVPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELFSK--VPSLVGSFIR-SQNKEDYAGLKEEFRKEFTKLEEVLTNKKTTFFGGNSISMIDYLIWPW-------FERLEAMKLNECVDHTPKLKLWMAAMKEDPTV 212          
BLAST of DY305540 vs. ExPASy Swiss-Prot
Match: GSTO1_MOUSE (Glutathione S-transferase omega-1 OS=Mus musculus GN=Gsto1 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 8.239e-12
Identity = 59/187 (31.55%), Postives = 92/187 (49.20%), Query Frame = 2
Query:   29 PFGLRAFWILKLKGVQFDFIDEDLSNKSPLLLQSNPVYKKVPVLIHN-GKPISESLIILEYVDETWKQNPLLPEDPYERARARFWAKFGDDKVLASIWNAFIKQGKEQEEAIGLAIET-LKFLEEELKG-KRFFGGEKIGLPD-LALGWLANLIGVFEEVIGVKLIE-KERFPLLSAWMQEFAEAPV 574
            PF  R   +LK KG++ + I+ +L NK     + NP+   VPVL ++ G  ++ES+I  EY+DE + +  L P+DPY++AR +   +    KV   I +    + KE    +  A+E   K LEE +   K F GG+   + D L   W       F+ +  ++L E     P L  WM    + PV
Sbjct:   33 PFAQRTLMVLKAKGIRHEVININLKNKPEWFFEKNPL-GLVPVLENSQGHLVTESVITCEYLDEAYPEKKLFPDDPYKKARQKMTLE-SFSKVPPLIASFVRSKRKEDSPNLREALENEFKKLEEGMDNYKSFLGGDSPSMVDYLTWPW-------FQRLEALELKECLAHTPKLKLWMAAMQQDPV 210          
The following BLAST results are available for this feature:
BLAST of DY305540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
GSTX4_TOBAC5.666e-3741.82Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXC_TOBAC2.153e-3641.40Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTU1_ORYSJ2.158e-2836.49Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTU1_ORYSI4.808e-2835.59Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTX2_MAIZE3.445e-2637.85Probable glutathione S-transferase BZ2 OS=Zea mays... [more]
GSTO1_RAT6.740e-1433.68Glutathione S-transferase omega-1 OS=Rattus norveg... [more]
GSTO1_HUMAN1.961e-1334.55Glutathione S-transferase omega-1 OS=Homo sapiens ... [more]
GSTO1_MOUSE8.239e-1231.55Glutathione S-transferase omega-1 OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1BD12RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305540 ID=DY305540; Name=DY305540; organism=Citrus sinensis; type=EST; length=1253bp
GGTGAAGCTTTTGAAGACGTGGTCAAGCCCCTTTGGTTTGAGAGCTTTTT
GGATATTGAAACTCAAGGGCGTTCAATTTGATTTCATAGATGAAGATCTC
TCTAACAAAAGCCCTTTACTTCTTCAATCTAATCCTGTCTATAAAAAAGT
TCCTGTACTTATACACAACGGGAAACCAATCTCAGAATCACTAATAATTC
TTGAATATGTTGATGAGACTTGGAAGCAAAATCCTTTGCTTCCTGAAGAT
CCTTACGAAAGAGCCAGGGCTCGCTTCTGGGCTAAATTTGGTGATGATAA
GGTTTTGGCATCAATATGGAATGCTTTCATTAAGCAAGGGAAAGAACAAG
AGGAAGCTATTGGCCTAGCAATTGAGACTCTGAAATTCTTAGAAGAAGAG
CTGAAGGGAAAGAGATTTTTTGGTGGAGAGAAGATTGGATTACCAGATCT
TGCATTGGGCTGGCTTGCTAATTTGATCGGCGTATTTGAAGAGGTAATTG
GTGTGAAACTGATAGAAAAGGAGCGGTTTCCACTGCTGTCAGCTTGGATG
CAAGAGTTTGCTGAGGCCCCTGTAATCAAAGAAAGCTGGCCACCTCATGA
AAAACTAGTCACCAAATTTCGTGCCATGCGAGAGCCTTATGTTGCAGCTG
CTGCCCAGCCTAAATGACAAATTTAGTATGTGTGGGGGATTTTGAGCCTT
GCGCTCTTGTTTCGACTGCAAGAGGCTAAACCAACAAGGTTGTCTGGTTG
TAGATGGTAACTGTGTATGTTTTAATGCAAATAACGGAACTTAATTGCTG
GAATTTGGGAAGGAATTGTATTGTGTTACCTTTCTGAATGTTCTGTTTCT
CATTCCCAAAAGAATGAAAAAAATTTTCCTTTTGGCCCTTTTCTCATTCA
ATAAAAAAAAAAAAAAAAAAAAATCCAAGGGGGGGGCCCGGGTCCCCAAT
TGGCCCTAAAGAAGTCCTAAAAAAATTCCCTTGCCATCTGTTTTAAACGT
CGTAATGGGGGAAAGACCGGGATTTAACGAAGATGTAGCGCGGGGGGGGG
CGGGAGGGCTTTCCCCGACCCTGGAATTAAACCCAAAAAACCCCCCCACG
TATCCCCCTCTCCAAGTGTTCCCGCCCCGGGAGGGTGGAAAGAGGAAATA
TTAAAAAATTTGTAATATTGTGTATAAATATTTGCGTGTGATTAATTTTT
TGTTATTTAAAAAAGCCTCTTTTTTTTTTTTTAACCAACAACGGGAGGGC
GCC
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