DY305518
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305518 vs. ExPASy Swiss-Prot
Match: COPB2_HUMAN (Coatomer subunit beta' OS=Homo sapiens GN=COPB2 PE=1 SV=2) HSP 1 Score: 290.812 bits (743), Expect = 1.128e-77 Identity = 145/302 (48.01%), Postives = 203/302 (67.22%), Query Frame = 2 Query: 5 RLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQKVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATXGVHPPAEDYVNHADKSYMTLVEAFKNMQ 910 RLNY VGGE+ T+ HLDR MYLLGY+ +R+YL DKE N++ Y+LL+S++EY+T VMR D A+++LP+IPKE VA FLE +G ++A+ V+TDP++RFELA+QLG L++A ++A E +SE KWKQL ELA+S + +A+ C+ A D +A ++KLA A+ GKNNVAF+ F+ GK++ CL+LL+ + R+PEAA +AR+YLPS+VS +V +WR++L KVN KAAESLADP EY NLF + A VE T PA+ Y ++E K+ Q Sbjct: 542 RLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIISYSLLVSVLEYQTAVMRRDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNANMVNKLAEGAERDGKNNVAFMSYFLQGKVDACLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKVNQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHADLWPAKQYPLVTPNEERNVMEEGKDFQ 843
BLAST of DY305518 vs. ExPASy Swiss-Prot
Match: COPB2_MACFA (Coatomer subunit beta' OS=Macaca fascicularis GN=COPB2 PE=2 SV=1) HSP 1 Score: 288.886 bits (738), Expect = 4.288e-77 Identity = 144/302 (47.68%), Postives = 202/302 (66.89%), Query Frame = 2 Query: 5 RLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQKVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATXGVHPPAEDYVNHADKSYMTLVEAFKNMQ 910 RLNY VGGE+ T+ HLDR MYLLGY+ +R+YL DKE N++ Y+LL+S++EY+T VMR D A+++LP+IPKE VA FLE +G ++A+ V+TDP++RFELA+QLG L++A ++A E +SE KWKQL ELA+S + +A+ C+ A D +A ++KLA A+ GKNNVAF+ F+ GK++ CL+LL+ + R+PEAA +AR+YLPS+VS +V +WR++L KVN KAAESLADP EY NLF + A VE T PA+ + ++E K Q Sbjct: 542 RLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMRRDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNANMVNKLAEGAERDGKNNVAFMSYFLQGKVDACLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKVNQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHADLWPAKQHPLVTPNEERNVMEEAKGFQ 843
BLAST of DY305518 vs. ExPASy Swiss-Prot
Match: COPB2_DROME (Coatomer subunit beta' OS=Drosophila melanogaster GN=beta'Cop PE=2 SV=2) HSP 1 Score: 263.848 bits (673), Expect = 1.477e-69 Identity = 127/267 (47.57%), Postives = 184/267 (68.91%), Query Frame = 2 Query: 5 RLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQKVNPKAAESLADPEEYSNLFDDWQVALAVE 805 R+NY VGGE+ T+ HLDR MYLLGY+ +R+YL DKE NV+ + L LS++EY+T VMR D ERA+ +LP+IPKEH VA FLE +G +A++V+TD D++F+LA+Q+G LE+A ++A E ++ KW QL ++A S + + + CM++A D DA+ + + + QG +N+AFL F+ +E CL++L+E+NR+PEAA AR+YLPS++S IV +WR+ L KVN KA +SLADP +Y+NLF AL VE Sbjct: 544 RINYYVGGEIVTVSHLDRTMYLLGYVPKDNRIYLGDKELNVISFCLQLSVLEYQTAVMRRDFERADVVLPTIPKEHRTRVAHFLEKQGFKSQALQVSTDADHKFDLALQIGDLEIALKLARESENSQKWSQLADVASSKNNMSLVKECMQKANDLSGLLLLSTASGDAQLLEVVGAAGSAQGHHNLAFLSAFLRSDVERCLEILIETNRLPEAAFFARTYLPSQMSRIVELWREKLGKVNEKAGQSLADPAQYTNLFPGLGDALRVE 810
BLAST of DY305518 vs. ExPASy Swiss-Prot
Match: COPB2_DICDI (Coatomer subunit beta' OS=Dictyostelium discoideum GN=copb2 PE=3 SV=1) HSP 1 Score: 252.292 bits (643), Expect = 4.448e-66 Identity = 127/288 (44.10%), Postives = 191/288 (66.32%), Query Frame = 2 Query: 5 RLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFLC-LFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQKVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATXGVHPPAEDYVNHA 865 +LNYCVG EV T+ HL++ MYLL YL R+YL DK N++ Y L +S+I Y+T ++RGDLE A ILP IP++ NS+A FLES+G E+A+EV+TD D+RFELAIQL L+VA EIA + SE+K+K LG+LA+S G++++AE C+K+A D D EG+ LA L++E+G+ N++F+C L + L +CL L S EAA MAR+YLPS V ++V W++ L+ + KA+++L++P ++ NLF + +++ E + + DY+ +A Sbjct: 544 KLNYCVGTEVVTISHLEKHMYLLKYLPQSGRLYLSDKNLNIVSYKLHISVISYQTSILRGDLEGAERILPKIPQDQRNSIAHFLESQGYKEKALEVSTDLDHRFELAIQLENLDVAHEIALKSDSETKFKHLGDLALSIGEIKLAENCLKKAEDLPGLLLLYTSTGDIEGMKMLAKLSEEKGQTNISFICNLLLPNSLLNCLNTLCASGDYSEAAFMARTYLPSMVPDMVEKWKESLKSTSSKASDALSNPIDFPNLFPQYDLSIKAEKYFESLRSQPKSSFDYLKNA 831
BLAST of DY305518 vs. ExPASy Swiss-Prot
Match: COPB2_CAEEL (Probable coatomer subunit beta' OS=Caenorhabditis elegans GN=F38E11.5 PE=2 SV=2) HSP 1 Score: 228.794 bits (582), Expect = 5.266e-59 Identity = 116/284 (40.85%), Postives = 176/284 (61.97%), Query Frame = 2 Query: 5 RLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDL----QKVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATXGVHPPA 844 R+NY VGGE+ T+ H+DRP+YLLGY+A +SRVY +DK+ NV+ Y LLLS++EY+T VMR D + A+++L +IPKE VA FLE +G ++A+ V+ DPD++F+L++ LG L+ A ++A + SE KWK L A +L +A C+ +A D A + KLA + +N++FL +LG ++ CL L+ + R+PEAA +AR++ PS+VS I+ +W+ +K + K ESLADP +Y NLF + +L ES + PA Sbjct: 541 RINYYVGGEIVTIAHVDRPLYLLGYMAKESRVYAVDKDLNVISYKLLLSVLEYQTAVMRRDFDTADKVLTTIPKEQRTRVAHFLEKQGFKKQALAVSQDPDHKFDLSVALGDLKTAYDLALQSDSEEKWKALSNAATLKSELLLAGECLGRARDFGGLMLLATCAGSAPLLQKLADDSAAAESHNISFLSSLLLGDIDACLDKLISTGRLPEAAFLARTHAPSRVSSILELWKAKASGHSEKSSRKIGESLADPVKYENLFPGFTQSLKAESFVREISKIPVPA 824
BLAST of DY305518 vs. ExPASy Swiss-Prot
Match: COPB2_SCHPO (Probable coatomer subunit beta' OS=Schizosaccharomyces pombe GN=sec27 PE=2 SV=2) HSP 1 Score: 170.244 bits (430), Expect = 2.223e-41 Identity = 86/252 (34.13%), Postives = 143/252 (56.75%), Query Frame = 2 Query: 5 RLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQK-VNPKAAESLADPE 757 RLNY +G + + +++ YLLGY+ R+YL D++ NV+ Y+ L++IEY++LV++GDLE A +L I + ++ FL G E A+E++ D RFELA+ RL++A +IA E+ KW+ LG+ A++ +A+ C ++ D + EG+ +L+ L K NN AF+C ++ + +C+ +L + R PEA L A +Y P +V ++ W+ DL K + A+SL D E Sbjct: 542 RLNYLIGDQTYKIANVESSFYLLGYIPRDDRIYLTDRDMNVVSYSFNLAIIEYQSLVLKGDLEAAQGLLEQISETDRPRLSDFLSRLGYKEAALELSGDSVQRFELALDAQRLDIASQIAQELDDPLKWRSLGDAALNAWDFVLAQECFEKGKDYGSLVLLYTATNNHEGLKELSQLTKSTKINNTAFICSWLTNQPAECVNILTSTQRYPEANLFAATYCPDEVKNVLPEWKVDLTKNQKERIADSLGDLE 793
BLAST of DY305518 vs. ExPASy Swiss-Prot
Match: COPB2_YEAST (Coatomer subunit beta' OS=Saccharomyces cerevisiae GN=SEC27 PE=1 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 7.906e-39 Identity = 86/240 (35.83%), Postives = 144/240 (60.00%), Query Frame = 2 Query: 5 RLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANE-ILPSIP-KEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSY--LPSKVSEIVAIWRKDL 712 RLNY VGG+ + H + MYLLGYLA ++VYL D+E +V GY + L ++E++TL +RG++E A E +LP++ K+ +ARFLE + EEA+ ++ D D +FELA+++G+L +A+++ T+ +E KW+ LG+ ++ ++A A D + EG+ LA A+ GK N+AF ++ G ++ LL++S R EAA + +Y V++IV W+++L Sbjct: 554 RLNYFVGGKTYNLAHYTKEMYLLGYLARDNKVYLADREVHVYGYEISLEVLEFQTLTLRGEIEEAIENVLPNVEGKDSLTKIARFLEGQEYYEEALNISPDQDQKFELALKVGQLTLARDLLTDESAEMKWRALGDASLQRFNFKLAVEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAERAGKFNLAFNAYWIAGDIQGAKDLLIKSQRFSEAAFLGSTYGLGDDAVNDIVTKWKENL 793
BLAST of DY305518 vs. ExPASy Swiss-Prot
Match: COPA_SCHPO (Putative coatomer subunit alpha OS=Schizosaccharomyces pombe GN=SPBPJ4664.04 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.131e-11 Identity = 56/247 (22.67%), Postives = 114/247 (46.15%), Query Frame = 2 Query: 20 VGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSY-LPSKVSEIVAIWRKDLQKVN-PKAAESLADP 754 + G+ + L+ +YL+ A + V+ +++ + + + + +K ++R D E+ ++ + +A +L+ +G E A++ DP RFELA++ G LE A E+A + W +L AMS G ++AE ++ +AE + K+A +A+++ F L ++E + +L ++ P A L A+S L K +I++ K +++ P + P Sbjct: 561 MSGDTGVIKTLESTLYLVK--AKGNMVFALNRAAEPVSFEIDPTEYLFKLALLRKDYEQVLHLIQNSNLVGQAIIA-YLQKKGYPEIALQFVEDPSTRFELALECGNLETALELARTIDRPEVWSRLASDAMSYGNHKIAEITFQKLRYFEKLSFLYLITGNAEKLQKMAIIAEKRNDTLSLFQNSLYLNEVESRINILEQAGMYPIAYLTAKSNGLEEKAQQILSHCNKTEEEIKLPSLGSAFTTP 804 The following BLAST results are available for this feature:
BLAST of DY305518 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY305518 ID=DY305518; Name=DY305518; organism=Citrus sinensis; type=EST; length=1253bpback to top |