EY702557

Overview
NameEY702557
Unique NameEY702557
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length986
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702557 vs. ExPASy Swiss-Prot
Match: CATV_NPVEP (Viral cathepsin OS=Epiphyas postvittana nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.843e-11
Identity = 31/67 (46.27%), Postives = 39/67 (58.21%), Query Frame = 2
Query:  236 YESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAME 436
            YE GI        L+H V  VGYG EN   YWI+KNSWG+ WGE G+ ++++NV       CGI  E
Sbjct:  254 YEQGIIKYCANNGLNHAVLLVGYGVENNVPYWILKNSWGTDWGEQGFFKIQQNV-----NACGIKNE 315          
BLAST of EY702557 vs. ExPASy Swiss-Prot
Match: CATF_MOUSE (Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.843e-11
Identity = 47/123 (38.21%), Postives = 60/123 (48.78%), Query Frame = 2
Query:   86 SCDTYRKNAKVVTIDDYEDGPLNDEKALQKAVGEGAGSVAIEGGGMAFQLYESGI---FTGRCGT-SLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEAS 442
            +C+   + AKV  I+D  +   N+ K       +G  SVAI   GM F  Y  GI   F   C    +DH V  VGYG  +   YW +KNSWGS WGE GY  + R      +G CG+   AS
Sbjct:  343 TCNFSAQMAKVY-INDSVELSRNENKIAAWLAQKGPISVAINAFGMQF--YRHGIAHPFRPLCSPWFIDHAVLLVGYGNRSNIPYWAIKNSWGSDWGEEGYYYLYRG-----SGACGVNTMAS 457          
BLAST of EY702557 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.561e-11
Identity = 32/83 (38.55%), Postives = 44/83 (53.01%), Query Frame = 2
Query:  149 LNDEKALQKAVGEGAGSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNV 397
            +N+EK        G   +AI+   +    Y  G+ +      L+H V  VGYG ENG  YW+ KN+WG  WGE GY R+ +NV
Sbjct:  260 VNEEKLKDLLRAVGPIPMAIDAADIVN--YYRGVISSCENNGLNHAVLLVGYGVENGVPYWVFKNTWGDDWGENGYFRVRQNV 340          
BLAST of EY702557 vs. ExPASy Swiss-Prot
Match: CATM_MOUSE (Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.561e-11
Identity = 45/141 (31.91%), Postives = 64/141 (45.39%), Query Frame = 2
Query:   41 GFPSPPRVRLQSFDGSCDTYRKNAKVVTIDDYEDGPLNDEKALQKAVGEGAGSVAIEGGGMAFQLYESGIF-TGRCGTSL-DHGVTAVGYG----TENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 445
            G  S      +  DGSC  Y        I  +E  P N++  +      G  SVAI+    +F  Y+ GI+    C + +  H +  VGYG      +G  YW+VKNS G+ WG  GY+++ R+        CGIA  A Y
Sbjct:  195 GLESEATYPYEEKDGSC-RYSPENSTANITGFEFVPKNEDALMNAVASIGPISVAIDARHASFLFYKRGIYYEPNCSSCVVTHSMLLVGYGFTGRESDGRKYWLVKNSMGTQWGNKGYMKISRDKG----NHCGIATYALY 330          
BLAST of EY702557 vs. ExPASy Swiss-Prot
Match: CATJ_RAT (Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 8.561e-11
Identity = 41/128 (32.03%), Postives = 64/128 (50.00%), Query Frame = 2
Query:   80 DGSCDTYRKNAKVVTIDDYEDGPLNDEKALQKAVGEGAGSVAIEGGGMAFQLYESGIF-TGRCGTSL-DHGVTAVGYGTE----NGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 445
            DG C  + +NA    I  + + P N+          G  S AI+    +F+ Y  G++    C + + +H V  VGYG E    +G +YW++KNSWG  WG  G+++    +A      CGIA +AS+
Sbjct:  208 DGPCRYHSENASA-NITGFVNLPPNELYLWVAVASIGPVSAAIDASHDSFRFYSGGVYHEPNCSSYVVNHAVLVVGYGFEGNETDGNNYWLIKNSWGEEWGINGFMK----IAKDRNNHCGIASQASF 330          
The following BLAST results are available for this feature:
BLAST of EY702557 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
CATV_NPVEP3.843e-1146.27Viral cathepsin OS=Epiphyas postvittana nucleopoly... [more]
CATF_MOUSE3.843e-1138.21Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1[more]
CATV_NPVLD8.561e-1138.55Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
CATM_MOUSE8.561e-1131.91Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1[more]
CATJ_RAT8.561e-1132.03Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-009-D08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702557 ID=EY702557; Name=EY702557; organism=Citrus sinensis; type=EST; length=986bp
TTTTCCCCCCCNNNACCTGGTACCCTGCAGTACCGGTGCCGGATTCCCTT
CTCCACCCCGCGTCCGCCTACAAAGCTTTGATGGGAGCTGTGACACATAT
CGGAAAAATGCCAAAGTAGTTACAATTGATGACTATGAAGATGGTCCCCT
AAATGACGAGAAAGCTTTGCAAAAGGCAGTTGGGGAGGGGGCCGGGAGTG
TTGCCATTGAAGGAGGTGGCATGGCATTCCAGTTATATGAATCGGGTATA
TTTACGGGAAGATGTGGGACATCTCTGGACCATGGTGTTACTGCTGTTGG
ATATGGCACAGAAAATGGAGCTGATTACTGGATTGTGAAGAATTCATGGG
GCAGTAGCTGGGGAGAGGGTGGCTATATTAGGATGGAGCGTAACGTGGCT
GGGACTCTCACGGGCAAGTGTGGAATTGCCATGGAGGCCTCATATCCCAT
AAAGAAAGGCCAAAATCCTCCCAACCCCGGACCGTCTCCTCCATCTCCAA
CAAAGCCTCCTGCTGTGTGTGACAATTATTACTCTTGCCCTGAGAGCAAC
ACTTGCTGCTGTGTCTTTGAGTATGGTAACTCTTGCTTTGCATGGGGATG
CTGCCCGGTTGAGGCTGCCACCTGCTGTGATGACCACTATAGCTGGTGCC
CCACTGACTATCCCCATCTGTAATGGTTCGTGCTCGGGACCTGCTTGATG
AGGCAGGGACAACCCCTTGGGGAGTGAGGGCATTGCCGACGCACCCCTGG
CAAAACCGTACGGGGCTCCTGGGAAACCAGGGGGGGAAGGAACCAGGGCC
TTAATTAAAGTGTGGGCACTGTAAACAACCCTCCGAAGGCCCCAGGGGAA
GGATAAACACACTCCCCGGCTGGCGAAGGAGTTTCCCCCCCCGGCCTTCA
GCTCACTTTACCGGCTCTCCTATTCCAACGCTCATTGGCACCGGCGGCGG
GGGAGCCCGGTCAAAAATTTATTCCGGGCCGCGCGG
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