EY702556

Overview
NameEY702556
Unique NameEY702556
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702556 vs. ExPASy Swiss-Prot
Match: KDC_MYCPA (Alpha-keto-acid decarboxylase OS=Mycobacterium paratuberculosis GN=kdc PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.830e-32
Identity = 63/126 (50.00%), Postives = 87/126 (69.05%), Query Frame = 1
Query:  217 VPATPLVNPSESTLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHYTIG 594
            +P T        T+G +L  RL ++G +++F VPGD+NL  LDH++A P L  +G  NELNAGYAADGY R RG+ A V TF VG LS  NA+AG+Y+E +P++ IVGGP+ +  GT R LH+++G
Sbjct:    1 MPVTDAATEPAYTVGDYLLDRLAELGVSEIFGVPGDYNLEFLDHIVAHPRLRWVGNANELNAGYAADGYGRLRGMSALVTTFGVGELSAANAVAGSYAEQVPVVHIVGGPSKDAQGTRRALHHSLG 126          
BLAST of EY702556 vs. ExPASy Swiss-Prot
Match: KDC_MYCA1 (Alpha-keto-acid decarboxylase OS=Mycobacterium avium (strain 104) GN=kdc PE=3 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 7.830e-32
Identity = 63/126 (50.00%), Postives = 87/126 (69.05%), Query Frame = 1
Query:  217 VPATPLVNPSESTLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHYTIG 594
            +P T        T+G +L  RL ++G +++F VPGD+NL  LDH++A P L  +G  NELNAGYAADGY R RG+ A V TF VG LS  NA+AG+Y+E +P++ IVGGP+ +  GT R LH+++G
Sbjct:    1 MPVTDAATEPAYTVGDYLLDRLAELGVSEIFGVPGDYNLEFLDHIVAHPRLRWVGNANELNAGYAADGYGRLRGMSALVTTFGVGELSAANAVAGSYAEQVPVVHIVGGPSKDAQGTRRALHHSLG 126          
BLAST of EY702556 vs. ExPASy Swiss-Prot
Match: KDC_MYCTU (Alpha-keto-acid decarboxylase OS=Mycobacterium tuberculosis GN=kdc PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.023e-31
Identity = 62/114 (54.39%), Postives = 85/114 (74.56%), Query Frame = 1
Query:  253 TLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHYTIG 594
            T+G +L  RL ++G +++F VPGD+NL  LDH++A P +  +G  NELNAGYAADGY R RG+ A V TF VG LSV NAIAG+Y+E++P++ IVGGP  +  GT R LH+++G
Sbjct:   15 TVGDYLLDRLAELGVSEIFGVPGDYNLQFLDHIVAHPTIRWVGSANELNAGYAADGYGRLRGMSAVVTTFGVGELSVTNAIAGSYAEHVPVVHIVGGPTKDAQGTRRALHHSLG 128          
BLAST of EY702556 vs. ExPASy Swiss-Prot
Match: KDC_MYCTA (Alpha-keto-acid decarboxylase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=kdc PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.023e-31
Identity = 62/114 (54.39%), Postives = 85/114 (74.56%), Query Frame = 1
Query:  253 TLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHYTIG 594
            T+G +L  RL ++G +++F VPGD+NL  LDH++A P +  +G  NELNAGYAADGY R RG+ A V TF VG LSV NAIAG+Y+E++P++ IVGGP  +  GT R LH+++G
Sbjct:   15 TVGDYLLDRLAELGVSEIFGVPGDYNLQFLDHIVAHPTIRWVGSANELNAGYAADGYGRLRGMSAVVTTFGVGELSVTNAIAGSYAEHVPVVHIVGGPTKDAQGTRRALHHSLG 128          
BLAST of EY702556 vs. ExPASy Swiss-Prot
Match: KDC_MYCBP (Alpha-keto-acid decarboxylase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=kdc PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.023e-31
Identity = 62/114 (54.39%), Postives = 85/114 (74.56%), Query Frame = 1
Query:  253 TLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHYTIG 594
            T+G +L  RL ++G +++F VPGD+NL  LDH++A P +  +G  NELNAGYAADGY R RG+ A V TF VG LSV NAIAG+Y+E++P++ IVGGP  +  GT R LH+++G
Sbjct:   15 TVGDYLLDRLAELGVSEIFGVPGDYNLQFLDHIVAHPTIRWVGSANELNAGYAADGYGRLRGMSAVVTTFGVGELSVTNAIAGSYAEHVPVVHIVGGPTKDAQGTRRALHHSLG 128          
BLAST of EY702556 vs. ExPASy Swiss-Prot
Match: KDC_MYCBO (Alpha-keto-acid decarboxylase OS=Mycobacterium bovis GN=kdc PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.023e-31
Identity = 62/114 (54.39%), Postives = 85/114 (74.56%), Query Frame = 1
Query:  253 TLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHYTIG 594
            T+G +L  RL ++G +++F VPGD+NL  LDH++A P +  +G  NELNAGYAADGY R RG+ A V TF VG LSV NAIAG+Y+E++P++ IVGGP  +  GT R LH+++G
Sbjct:   15 TVGDYLLDRLAELGVSEIFGVPGDYNLQFLDHIVAHPTIRWVGSANELNAGYAADGYGRLRGMSAVVTTFGVGELSVTNAIAGSYAEHVPVVHIVGGPTKDAQGTRRALHHSLG 128          
BLAST of EY702556 vs. ExPASy Swiss-Prot
Match: PDC_ZYMMO (Pyruvate decarboxylase OS=Zymomonas mobilis GN=pdc PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.131e-30
Identity = 60/114 (52.63%), Postives = 83/114 (72.81%), Query Frame = 1
Query:  253 TLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHYTIG 594
            T+G +LA RLVQIG    F+V GD+NL LLD+L+    +  + CCNELN G++A+GYAR++G  A VVT++VG LS  +AI GAY+ENLP+I I G PN+ND+    +LH+ +G
Sbjct:    4 TVGTYLAERLVQIGLKHHFAVAGDYNLVLLDNLLLNKNMEQVYCCNELNCGFSAEGYARAKGAAAAVVTYSVGALSAFDAIGGAYAENLPVILISGAPNNNDHAAGHVLHHALG 117          
BLAST of EY702556 vs. ExPASy Swiss-Prot
Match: KDC_MYCUA (Alpha-keto-acid decarboxylase OS=Mycobacterium ulcerans (strain Agy99) GN=kdc PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.477e-30
Identity = 60/114 (52.63%), Postives = 84/114 (73.68%), Query Frame = 1
Query:  253 TLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHYTIG 594
            T+G +L  RL ++G +++F VPGD+NL  LDH++A P +  +G  NELNAGYAADGY R RG+ A V TF VG LS  NAIAG+Y+E++P++ IVGGP+ +  G  R LH+++G
Sbjct:   15 TVGDYLLDRLAELGVSEIFGVPGDYNLEFLDHIVAHPIIRWVGSANELNAGYAADGYGRLRGMSAVVTTFGVGELSATNAIAGSYAEHVPVVHIVGGPSKDAQGARRALHHSLG 128          
BLAST of EY702556 vs. ExPASy Swiss-Prot
Match: PDC_NEUCR (Pyruvate decarboxylase OS=Neurospora crassa GN=cfp PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.929e-30
Identity = 63/114 (55.26%), Postives = 78/114 (68.42%), Query Frame = 1
Query:  253 TLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHYTIG 594
            T+G +LA RL Q+G    F VPGD+NL LLD L A P L  +GC NELN   AA+GYAR+ G+ ACVVT++VG LS  N    AY+ENLPL+ I G PN+ND     ILH+T+G
Sbjct:   10 TVGDYLAERLAQVGVRHHFVVPGDYNLILLDKLQAHPDLKEVGCANELNCSLAAEGYARANGISACVVTYSVGALSAFNGTGSAYAENLPLVLISGSPNTNDPSQYHILHHTLG 123          
BLAST of EY702556 vs. ExPASy Swiss-Prot
Match: KDC_MYCS2 (Alpha-keto-acid decarboxylase OS=Mycobacterium smegmatis GN=kdc PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 7.329e-30
Identity = 60/114 (52.63%), Postives = 82/114 (71.93%), Query Frame = 1
Query:  253 TLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHYTIG 594
            T+G +L  RL ++G T+VF VPGD+ L  LDH++A P +  +G  NELNAGYAADGY R RG+ A V TF VG LS  NAIAG+Y+E++P++ IVG P+ +     RI+H+T+G
Sbjct:    7 TVGDYLLDRLAELGVTEVFGVPGDYQLEFLDHVVAHPRITWVGGANELNAGYAADGYGRLRGMAALVTTFGVGELSAANAIAGSYAEHVPVVHIVGAPSKDSQAARRIVHHTLG 120          
The following BLAST results are available for this feature:
BLAST of EY702556 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
KDC_MYCPA7.830e-3250.00Alpha-keto-acid decarboxylase OS=Mycobacterium par... [more]
KDC_MYCA17.830e-3250.00Alpha-keto-acid decarboxylase OS=Mycobacterium avi... [more]
KDC_MYCTU1.023e-3154.39Alpha-keto-acid decarboxylase OS=Mycobacterium tub... [more]
KDC_MYCTA1.023e-3154.39Alpha-keto-acid decarboxylase OS=Mycobacterium tub... [more]
KDC_MYCBP1.023e-3154.39Alpha-keto-acid decarboxylase OS=Mycobacterium bov... [more]
KDC_MYCBO1.023e-3154.39Alpha-keto-acid decarboxylase OS=Mycobacterium bov... [more]
PDC_ZYMMO1.131e-3052.63Pyruvate decarboxylase OS=Zymomonas mobilis GN=pdc... [more]
KDC_MYCUA1.477e-3052.63Alpha-keto-acid decarboxylase OS=Mycobacterium ulc... [more]
PDC_NEUCR1.929e-3055.26Pyruvate decarboxylase OS=Neurospora crassa GN=cfp... [more]
KDC_MYCS27.329e-3052.63Alpha-keto-acid decarboxylase OS=Mycobacterium sme... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-009-D07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702556 ID=EY702556; Name=EY702556; organism=Citrus sinensis; type=EST; length=910bp
CCACGCGTCCGGGCACACTCTATAAGTCAAAAAAAAAAAAAAAACATTTC
TCAAAGACACTTTTCGGAAACACATTAACAAACGGACAATTCTTCGTCTC
CGGCCCTTCAATCAATCATGGACACTAAAGATGGGGTGCGGCTCGACACC
TGCAAGCCCCCATGCAGCGACTTAGCCAGCCCGCCAAACGGTGCCGTTTC
AACAATCCAATCCTCCGTTCCCGCTACTCCACTCGTCAACCCGTCCGAGT
CGACCCTCGGCCGCCACCTCGCTCGCCGGCTCGTCCAAATCGGCGCCACC
GACGTCTTCTCGGTCCCCGGCGACTTCAACTTGACGCTTCTCGACCACCT
GATAGCCGAGCCCGGGCTCAACTTGATCGGTTGCTGTAACGAGCTGAATG
CCGGATACGCTGCCGATGGGTACGCTCGCTCCCGTGGGGTCGGCGCCTGT
GTCGTGACCTTCACCGTTGGTGGGCTTAGCGTGCTTAACGCTATCGCCGG
TGCTTACAGTGAAAATCTGCCGTTGATTTGCATCGTTGGTGGGCCAAACT
CCAATGATTACGGAACCAACAGGATCCTTCATTATACCATTGGGCTTGCC
TGATTTTAGCCAAGAACTCCGATGGCTCTCAGACTGCCACCTGGTTATCA
GGGGTGGGGGGGAATAACTTGGAAGGAGCCCCCTGAGTTGATTGGTACGG
CGAGTACCACCTGCTTTTAAAGAAAGCCAGCCTGGTTTATACACCCGGTG
CTTGGAAACTTGCCTCGCGACTCCTCCTCCTACCTTTTACCCAAAACCCC
CTCCCCTTTCCCCTTTCTCCCCACGCCGACTAATGAAAGGGCCTCGGAGG
CTTCAACTTGAGGGGCCCACCCAAACTCCTCCGACCAGGGGGGGCAACCC
AGTGGTGGCG
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