DY305487
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPE_ARATH (T-complex protein 1 subunit epsilon OS=Arabidopsis thaliana GN=At1g24510 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 3.681e-28 Identity = 72/182 (39.56%), Postives = 105/182 (57.69%), Query Frame = 2 Query: 269 PVLVLK--DSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIA--MAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTV 802 P ++L+ D R G ANI A KAVA I+R++LGP+ M KML G I +TNDG IL ++DV + AK M+ELSR+QD E+GDGTT V+V+AG +L AE +D+ HP I Y A AV L++IA D N+ ++ + + +K ++ +A++A+ A V Sbjct: 11 PFIILREQDQKTRLRGIDAQKANIAAGKAVARILRSSLGPKGMDKMLQGPDGDITITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERQLDRGIHPIRIAEGYEMASRVAVEHLERIAQKFEFDVNNYEPLVQTCMTTLSSKIVNRCKRSLAEIAVKAVLAV 192
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPA_MONDO (T-complex protein 1 subunit alpha OS=Monodelphis domestica GN=TCP1 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 4.808e-28 Identity = 62/170 (36.47%), Postives = 105/170 (61.76%), Query Frame = 2 Query: 296 KRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVL-DKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTV 802 +R +G + N+ A+ ++A+I++++LGP + KML+D G + +TNDG IL+ L+V HPAAK + EL+ QD+EVGDGTTSV+++A E+L A+E + + HPT I Y A ++AV + + + + D + ++ K+ + +K GD A++ +DA V Sbjct: 10 ERTTGESIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSIIGGYRLACKEAVRYINENLIINTDELGKDCLINAAKTSMSSKIIGIDGDFFANMVVDAVLAV 179
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPH_DICDI (T-complex protein 1 subunit eta OS=Dictyostelium discoideum GN=cct7 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 6.279e-28 Identity = 58/169 (34.32%), Postives = 104/169 (61.54%), Query Frame = 2 Query: 248 LDTIMHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSCIGTKFTSQ 754 + ++ P+++LK+ G +NI A A+ D +RTTLGPR M K++ + + ++NDG +++ LD+ HPAA+++++++++QD EVGDGTTSV++LAGE L A+ F+++ HP +I RA+ A E A + ++++ I + M ++ C T S+ Sbjct: 1 MSQMIRPPIVLLKEGTDTSQGLPQLISNINACCAIVDTVRTTLGPRGMDKLIYQSERQVTISNDGATVMKLLDIVHPAARTLVDIAKSQDSEVGDGTTSVVILAGEFLKAAKPFLEEGIHPQIIIRAFRSACELAKQKIQELSVDIKPEN---MREFLEKCASTSMNSK 166
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPA_MACFA (T-complex protein 1 subunit alpha OS=Macaca fascicularis GN=TCP1 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 6.279e-28 Identity = 65/182 (35.71%), Postives = 108/182 (59.34%), Query Frame = 2 Query: 260 MHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVL-DKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTV 802 M P+ V D R +G + N+ A+ ++A+I++++LGP + KML+D G + +TNDG IL+ L+V HPAAK + EL+ QD+EVGDGTTSV+++A E+L A+E + HPT + Y A ++AV + + + + D R ++ K+ + +K GD A++ +DA + Sbjct: 1 MEGPLSVFGD---RSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELGKQKIHPTSVISGYRLACKEAVRYINENLIVNTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAI 179
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPE1_AVESA (T-complex protein 1 subunit epsilon OS=Avena sativa PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 5.315e-27 Identity = 68/183 (37.16%), Postives = 109/183 (59.56%), Query Frame = 2 Query: 269 PVLVLKDSLKRE--SGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSCIGT---KFTSQFGDLIADLAIDATTTV 802 P ++L++ K+ G H ANI A+KA+A I+RT+LGP+ M KML G + +TNDG IL +DV + AK ++ELSR+QD ++GDGTT V+V+AG +L AE+ +++ HP + Y A AV L+ I+ + + + LV++C+ T K S+ +A++++ A V Sbjct: 11 PFIILREQEKKSRLQGLDAHKANIAAAKAIARILRTSLGPKGMDKMLQSPDGDVTITNDGATILELMDVDNQIAKLLVELSRSQDYDIGDGTTGVVVMAGALLEQAEKLLERGIHPIRVAEGYEMASRIAVDHLESISTKYEFS-ATDIEPLVQTCMTTLSSKIVSRCKRALAEISVKAVLAV 192
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPE2_AVESA (T-complex protein 1 subunit epsilon OS=Avena sativa PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.547e-26 Identity = 69/183 (37.70%), Postives = 107/183 (58.47%), Query Frame = 2 Query: 269 PVLVLKDSLKRE--SGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSCIGT---KFTSQFGDLIADLAIDATTTV 802 P ++L++ K+ G ANI A K+VA I+RT+LGP+ M KML G + +TNDG IL +DV + AK M+ELSR+QD ++GDGTT V+V+AG +L AE+ +++ HP + Y A AV L+ I+ + + + LV++C+ T K S+ +A++A+ A V Sbjct: 11 PFIILREQEKKSRLQGLDAQKANIAAGKSVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILELMDVDNQIAKLMVELSRSQDYDIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRVAEGYEMASRIAVDHLESISTKYEFS-ATDIEPLVQTCMTTLSSKIVSRCKRALAEIAVKAVLAV 192
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPZ_CHICK (T-complex protein 1 subunit zeta OS=Gallus gallus GN=CCT6 PE=1 SV=3) HSP 1 Score: 118.627 bits (296), Expect = 7.675e-26 Identity = 52/158 (32.91%), Postives = 99/158 (62.66%), Query Frame = 2 Query: 329 NIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTV 802 NI A++ + D++RT LGP+ +KML+ +G I +T DGN +L+E+ + HP A + +++ QD+ GDGTTS +++ GE+L A+ +I + HP ++ + A E A+ VL+++ + + DR T++ + K+ + TK ++ D++ + +D+ V Sbjct: 22 NISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLQEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIVAEGFEIAKEKALEVLEQVKVTKEM-DRETLIDVAKTSLRTKVHTELADILTEAVVDSVLAV 178
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPB_DICDI (T-complex protein 1 subunit beta OS=Dictyostelium discoideum GN=cct2 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.002e-25 Identity = 63/180 (35.00%), Postives = 104/180 (57.78%), Query Frame = 2 Query: 266 SPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGG--IVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTND---RATMLGLVKSCIGTKFTSQFGDLIADLAIDA 790 +P+ +L + E G ++ + A+ D+++TTLGP+ M K+L+ AS +++TNDG IL ++ + +PAAK ++++SRTQD+EVGDGTTSV VLAGE+L E + + HP I + ALE A A L ++ R +L + ++ + +K D A++ +DA Sbjct: 6 APIPILNQNASEERGEIARLSSFVGAIAITDLVKTTLGPKGMDKILISASNPNELIITNDGATILTKIYIDNPAAKILVDISRTQDDEVGDGTTSVCVLAGELLREGERLVQQKVHPQTIISGWRLALETARAALQSSTQDHSSDKVKFREDLLNIARTTLSSKILHTEKDHFANMVVDA 185
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPH_PLAF7 (T-complex protein 1 subunit eta OS=Plasmodium falciparum (isolate 3D7) GN=PFC0350c PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.309e-25 Identity = 60/206 (29.13%), Postives = 119/206 (57.77%), Query Frame = 2 Query: 257 IMHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTND----RATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQ---GLREVDIKKCI 853 +M P+++LK+ G NI A + + DI++TTLGPR M K++ + +TNDG ++ L+++HPAA +++++++QD+EVGDGTTSV+V+AGE+L+ A+ ++ P +I + A A+ L+++++ + R+ +L ++ + +K S + +L ++A +G +L + G+++V C+ Sbjct: 4 LMSLPIVLLKEGTDTAQGRSQIIRNINACQIIVDIVKTTLGPRGMDKLIY-TERDVTITNDGATVMNLLNISHPAASILVDIAKSQDDEVGDGTTSVVVVAGELLNEAKGLLNDGIEPNMIIDGFRNACNVAINKLNELSLNFSNKNEEEKRSILLKCAQTALNSKLVSNHKEFFGELVVNAVYKLGDNLDKSNIGIKKVTGGSCL 208
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPZ_RABIT (T-complex protein 1 subunit zeta OS=Oryctolagus cuniculus GN=CCT6 PE=2 SV=3) HSP 1 Score: 117.472 bits (293), Expect = 1.710e-25 Identity = 52/158 (32.91%), Postives = 99/158 (62.66%), Query Frame = 2 Query: 329 NIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTV 802 NI A++ + D++RT LGP+ +KML+ +G I +T DGN +L E+ + HP A + +++ QD+ GDGTTS +++ GE+L A+ +I + HP +I + A E A+ VL++I ++ + DR T++ + ++ + TK ++ D++ + +D+ + Sbjct: 23 NISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQVLEQIKVSREM-DRETLIDVARTSLRTKVHAELADVLTEAVVDSILAI 179 The following BLAST results are available for this feature:
BLAST of DY305487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 153
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY305487 ID=DY305487; Name=DY305487; organism=Citrus sinensis; type=EST; length=1254bpback to top |