DY305487
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: THS_DESSY (Thermosome subunit OS=Desulfurococcus sp. (strain SY) GN=ths PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 1.491e-37 Identity = 78/183 (42.62%), Postives = 119/183 (65.03%), Query Frame = 2 Query: 269 PVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLG 817 PV++L + +R G NI A++ VA+ IRTTLGP+ M KML+D+ G IV+TNDG IL E+D+ HPAAK M+E+++TQD+E GDGTT+ +V+AGE+L AEE +D+N HP++I + Y A E A +L+ IA + +D T+ + I K + + +A++A++A V +G Sbjct: 8 PVVILPEGTQRYVGRDAQRLNILAARIVAETIRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIHPSIIIKGYALAAEKAQEILEGIAKEVSPDDVETLKKAAVTSITGKAAEEEREYLAEIAVEAVRQVAEKVG 190
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: THS_METTL (Thermosome subunit OS=Methanococcus thermolithotrophicus GN=ths PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.947e-37 Identity = 82/201 (40.80%), Postives = 130/201 (64.68%), Query Frame = 2 Query: 263 HSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKCIKVGK 865 + PV+VL +++KR G NI A + + + +R+TLGP+ M KML+D G IVVTNDG IL+E+ V HPAAK +IE+++TQ++EVGDGTT+ +V+AGE+L AEE +D+N HPT++ + Y A++ A VL +IAM + +D+ + + + I K + + + ++ ++A T V + G +VD K IK+ K Sbjct: 4 NQPVVVLPENVKRFMGRDAQRMNILAGRIIGETVRSTLGPKGMDKMLVDDLGDIVVTNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNVHPTIVIKGYQLAVQKAQEVLKEIAMDVKADDKEILHKIAMTSITGKGAEKAKEKLGEMIVEAVTAVVDESG----KVD-KDLIKIEK 199
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: THSA_SULAC (Thermosome subunit alpha OS=Sulfolobus acidocaldarius GN=thsA PE=3 SV=2) HSP 1 Score: 157.147 bits (396), Expect = 1.947e-37 Identity = 85/211 (40.28%), Postives = 129/211 (61.14%), Query Frame = 2 Query: 260 MHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRA--TMLGLVKSCIGTKFTSQF-------GDLIADLAIDATTTVGVDLGQGLREVDIKKCIKVGK 865 M PVL+ K+ R SG NI A+ +A++++++LGPR + KML+D+ G + +TNDG I++E+++ HPAAK ++E ++ QD EVGDGTTS +VLAG +L AEE +++N HPT+I Y KAL A+ ++D++++ ID ND + T +K + T +S+F D I DL IDA T V G V + IK+ K Sbjct: 1 MAGPVLLFKEGTSRSSGRDALRNNILAAVTLAEMLKSSLGPRGLDKMLIDSFGDVTITNDGATIVKEMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGLLLDKAEELLEQNVHPTIIIDGYKKALTKALEIIDQLSLKIDVNDLSSPTAKAQLKKIVSTTMSSKFIAGGAEEIDKIIDLVIDAITIVAEKRPDGTYNVPL-DLIKIDK 210
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: THSB_AERPE (Thermosome subunit beta OS=Aeropyrum pernix GN=thsB PE=3 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 1.262e-36 Identity = 73/178 (41.01%), Postives = 118/178 (66.29%), Query Frame = 2 Query: 269 PVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTV 802 PV++LK+ +R G + ANI A +A+A I++TT GP+ M KML+D+ G I +TN+G IL ++DVAHPAAK ++++S+ Q++E GDGT + ++ AGE+L AE+ +D N HPT+I Y +AL A V++ IA + +D + + K+ + +K ++ D A+LA++A TV Sbjct: 15 PVIILKEGTQRSYGREALRANIMAVRAIAQILKTTYGPKGMDKMLVDSLGDITITNNGATILDKMDVAHPAAKMLVQISKGQEDEAGDGTKTTVIFAGELLKEAEKLLDINIHPTIIVEGYKEALRKASEVIESIAEPVSYDDVEKLKLIAKTSLNSKAVAEARDYFAELAVEAVRTV 192
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: THS_METJA (Thermosome subunit OS=Methanocaldococcus jannaschii GN=ths PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 2.153e-36 Identity = 87/206 (42.23%), Postives = 126/206 (61.17%), Query Frame = 2 Query: 266 SPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKCIKVGKGSWWPV 883 +P++VL ++KR G NI A + +A+ +RTTLGP+ M KML+D G IVVTNDG IL+E+ V HPAAK +IE+++TQ++EVGDGTT+ +V+AGE+L AEE +D+N HP+VI Y A AV L IA + D + + + I K + + +A++ ++A V VD G +VD K IKV K P+ Sbjct: 6 APIVVLPQNVKRYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVVTNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHPSVIINGYEMARNKAVEELKSIAKEVKPEDTEMLKKIAMTSITGKGAEKAREQLAEIVVEAVRAV-VDEETG--KVD-KDLIKVEKKEGAPI 207
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: THSA_SULSH (Thermosome subunit alpha OS=Sulfolobus shibatae GN=thsA PE=1 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 3.672e-36 Identity = 82/210 (39.05%), Postives = 128/210 (60.95%), Query Frame = 2 Query: 260 MHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTND------RATMLGLVKSCIGTKFTSQFGDL--IADLAIDATTTVGVDLGQGLREVDIKKCIKVGK 865 M SPVL+LK+ R +G NI A+K +A+++R++LGP+ + KML+D+ G + +TNDG I++++++ HPAAK ++E ++ QD EVGDGTTS +VLAG +L AE +D+N HPT+I Y KA A+ +L ++ ID D R T+ + + + +KF ++ +L I D+ IDA V L G V + IK+ K Sbjct: 1 MASPVLLLKEGTSRTTGRDALRNNILAAKTLAEMLRSSLGPKGLDKMLIDSFGDVTITNDGATIVKDMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGALLEKAESLLDQNIHPTIIIEGYKKAYTKALELLPQLGTRIDIRDLNSSVARDTLRKIAFTTLASKFIAEGAELNKIIDMVIDAIVNVAEPLPNGGYNVSL-DLIKIDK 209
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: THSA_METTH (Thermosome subunit alpha OS=Methanobacterium thermoautotrophicum GN=thsA PE=3 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 4.796e-36 Identity = 74/181 (40.88%), Postives = 119/181 (65.75%), Query Frame = 2 Query: 269 PVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVD 811 P+ +L R G + NI A K +A+ +RTTLGP+ M KML+D+ G IV+TNDG ILRE+D++HPAAK ++E+++TQ++EVGDGTT+ +++AGE+L AE+ I+ HPT+I Y A A +L++I+M + +DR T++ + + + K + + + +A+L +DA V D Sbjct: 7 PIFILPQDTSRYVGREAQRINILAGKVLAETVRTTLGPKGMDKMLVDSLGDIVITNDGVTILREMDISHPAAKMLVEVAKTQEDEVGDGTTTAVIIAGELLKEAEKLIEMGVHPTIIALGYRNAALKAQEILEEISM--EASDRDTLMKVAITAMTGKGSERAKEKLAELVVDAVMQVEED 185
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: THSA_SULSO (Thermosome subunit alpha OS=Sulfolobus solfataricus GN=thsA PE=3 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 6.264e-36 Identity = 81/210 (38.57%), Postives = 128/210 (60.95%), Query Frame = 2 Query: 260 MHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTND------RATMLGLVKSCIGTKFTSQFGDL--IADLAIDATTTVGVDLGQGLREVDIKKCIKVGK 865 M +PVL+LK+ R +G NI A+K +A+++R++LGP+ + KML+D+ G + +TNDG I++++++ HPAAK ++E ++ QD EVGDGTTS +VLAG +L AE +D+N HPT+I Y KA A+ +L ++ ID D R T+ + + + +KF ++ +L I D+ IDA V L G V + IK+ K Sbjct: 1 MAAPVLLLKEGTSRTTGRDALRNNILAAKTLAEMLRSSLGPKGLDKMLIDSFGDVTITNDGATIVKDMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGALLEKAESLLDQNIHPTIIIEGYKKAYNKALELLPQLGTRIDIKDLNSSVARDTLRKIAFTTLASKFIAEGAELNKIIDMVIDAIVNVAEPLPNGGYNVSL-DLIKIDK 209
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: THSA_HALSA (Thermosome subunit alpha OS=Halobacterium salinarium GN=thsA PE=3 SV=2) HSP 1 Score: 149.828 bits (377), Expect = 6.780e-36 Identity = 75/195 (38.46%), Postives = 121/195 (62.05%), Query Frame = 2 Query: 263 HSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKK 847 + P++VL + +R SG NI A KAVA+ +RTTLGP+ M KML+D+SG +VVTNDG IL+E+D+ HPAA ++E++ TQ+ EVGDGTT+ +V++GE+L AE ++++ H T + + Y +A E A +LD A+ + +D T+ + + + K +++DL + A +V D V ++K Sbjct: 7 NQPLIVLSEDSQRTSGEDAQSMNITAGKAVAESVRTTLGPKGMDKMLVDSSGEVVVTNDGVTILKEMDIEHPAANMIVEVAETQETEVGDGTTTSVVVSGELLSEAETLLEQDIHATTLAQGYRQAAEKAKELLDDAAIDVSADDTETLEKIAATAMTGKGAENAKGVLSDLVVRAVQSVADDNDVDTDNVKVEK 201 HSP 2 Score: 23.483 bits (49), Expect = 6.780e-36 Identity = 9/15 (60.00%), Postives = 13/15 (86.67%), Query Frame = 3 Query: 852 LKLEKVPGGPLENSK 896 +K+EKV GG +ENS+ Sbjct: 197 VKVEKVTGGAIENSE 211
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPD_PONAB (T-complex protein 1 subunit delta OS=Pongo abelii GN=CCT4 PE=2 SV=3) HSP 1 Score: 151.754 bits (382), Expect = 8.181e-36 Identity = 74/190 (38.95%), Postives = 118/190 (62.11%), Query Frame = 2 Query: 299 RESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLA-------IDATTTVGVDLGQGLREVDIKK 847 R+ ++ +NI A+KAVAD IRT+LGP+ M KM+ D G + +TNDG IL+++ V HPAA+ ++ELS+ QD E GDGTTSV+++AG +L + + K HPT+I ++ KALE + +L ++ ++ +DR T+L + + +K SQ+ L++ ++ ID T VD LR++ I K Sbjct: 27 RDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSDRETLLNSATTSLNSKVASQYSSLLSPMSVNAVMKVIDPATATSVD----LRDIKIVK 212 The following BLAST results are available for this feature:
BLAST of DY305487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 153
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305487 ID=DY305487; Name=DY305487; organism=Citrus sinensis; type=EST; length=1254bpback to top |