DY305487
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPE_PONAB (T-complex protein 1 subunit epsilon OS=Pongo abelii GN=CCT5 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.444e-32 Identity = 91/239 (38.08%), Postives = 140/239 (58.58%), Query Frame = 2 Query: 269 PVLVLKDSLKRES--GTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKI--AMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKCIKVGKGSWWPVGKF*GFLKDLCSTK-----KFFAPGKMGKK 958 P L++KD ++ G + ++I A+KAVA+ +RT+LGP + KM++D G + VTNDG IL +DV H AK M+ELS++QD+E+GDGTT V+VLAG +L AE+ +D+ HP I Y +A A+ LDKI ++ +D D ++ K+ +G+K + +A++A++A TV D+ + R+VD + IKV GK G L+D K K F+ +M KK Sbjct: 15 PFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARVAIEHLDKISDSVLVDIKDTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTV-ADMER--RDVDF-ELIKV-------EGKVGGRLEDTKLIKGVIVDKDFSHPRMPKK 242
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPE_RAT (T-complex protein 1 subunit epsilon OS=Rattus norvegicus GN=Cct5 PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.886e-32 Identity = 79/203 (38.92%), Postives = 126/203 (62.07%), Query Frame = 2 Query: 269 PVLVLKDSLKRES--GTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIA--MAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKCIKVGK 865 P L++KD ++ G + ++I A+KAVA+ +RT+LGP + KM++D G + VTNDG IL +DV H AK M+ELS++QD+E+GDGTT V+VLAG +L AE+ +D+ HP I Y +A A+ LDKI+ + +D N+ ++ K+ +G+K + +A++A++A TV D+ + R+VD + GK Sbjct: 15 PFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIQHLDKISDNVLVDINNPEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTV-ADMER--RDVDFELIKVEGK 214
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPE_MACFA (T-complex protein 1 subunit epsilon OS=Macaca fascicularis GN=CCT5 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.886e-32 Identity = 79/203 (38.92%), Postives = 125/203 (61.58%), Query Frame = 2 Query: 269 PVLVLKDSLKRES--GTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKI--AMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKCIKVGK 865 P L++KD ++ G + ++I A+KAVA+ +RT+LGP + KM++D G + VTNDG IL +DV H AK M+ELS++QD+E+GDGTT V+VLAG +L AE+ +D+ HP I Y +A A+ LDKI ++ +D D ++ K+ +G+K + +A++A++A TV D+ + R+VD + GK Sbjct: 15 PFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARVAIEHLDKISDSVLVDIKDTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTV-ADMER--RDVDFELIKVEGK 214
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPE_HUMAN (T-complex protein 1 subunit epsilon OS=Homo sapiens GN=CCT5 PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.886e-32 Identity = 79/203 (38.92%), Postives = 125/203 (61.58%), Query Frame = 2 Query: 269 PVLVLKDSLKRES--GTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKI--AMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKCIKVGK 865 P L++KD ++ G + ++I A+KAVA+ +RT+LGP + KM++D G + VTNDG IL +DV H AK M+ELS++QD+E+GDGTT V+VLAG +L AE+ +D+ HP I Y +A A+ LDKI ++ +D D ++ K+ +G+K + +A++A++A TV D+ + R+VD + GK Sbjct: 15 PFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARVAIEHLDKISDSVLVDIKDTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTV-ADMER--RDVDFELIKVEGK 214
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: THSB_SULAC (Thermosome subunit beta OS=Sulfolobus acidocaldarius GN=thsB PE=3 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 2.463e-32 Identity = 67/178 (37.64%), Postives = 110/178 (61.80%), Query Frame = 2 Query: 269 PVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTV 802 PV++LK+ R G + NI A KAV + ++TT GPR M KML+D+ G I +TNDG IL ++D+ HPAAK ++++++ QDEE DGT + ++ +GE++ AEE + K HPT+I Y KA E A+ +++I+ + ND + + + + +K + + +AD+ + A T V Sbjct: 15 PVIILKEGSSRTYGKEALRINIAAVKAVEEALKTTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPAAKLLVQIAKGQDEETADGTKTAVIFSGELVKKAEELLYKEIHPTIIVSGYKKAEEMAIKTIEEISTKVSVNDTEILRKVALTSLSSKAVAGAREHLADIVVKAITQV 192
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPE_MOUSE (T-complex protein 1 subunit epsilon OS=Mus musculus GN=Cct5 PE=1 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 3.217e-32 Identity = 78/203 (38.42%), Postives = 126/203 (62.07%), Query Frame = 2 Query: 269 PVLVLKDSLKRES--GTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIA--MAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKCIKVGK 865 P L++KD ++ G + ++I A+KAVA+ +RT+LGP + KM++D G + +TNDG IL +DV H AK M+ELS++QD+E+GDGTT V+VLAG +L AE+ +D+ HP I Y +A A+ LDKI+ + +D N+ ++ K+ +G+K + +A++A++A TV D+ + R+VD + GK Sbjct: 15 PFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTITNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIQHLDKISDKVLVDINNPEPLIQTAKTTLGSKVINSCHRQMAEIAVNAVLTV-ADMER--RDVDFELIKVEGK 214
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: THSB_SULSO (Thermosome subunit beta OS=Sulfolobus solfataricus GN=thsB PE=3 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 4.202e-32 Identity = 67/178 (37.64%), Postives = 108/178 (60.67%), Query Frame = 2 Query: 269 PVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTV 802 PV++LK+ R G + ANI A KA+ + +++T GPR M KML+D+ G I +TNDG IL ++D+ HP K ++++++ QDEE DGT + ++LAGE+ AE+ + K HPT+I Y KA E A+ + +IA + ND + + + +G+K + + +ADL + A V Sbjct: 14 PVIILKEGSSRTYGKEALRANIAAVKAIEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPTGKLLVQIAKGQDEETADGTKTAVILAGELAKKAEDLLYKEIHPTIIVSGYKKAEEIALKTIQEIAQPVTINDTDVLRKVALTSLGSKAVAGAREYLADLVVKAVAQV 191
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPH_CHICK (T-complex protein 1 subunit eta OS=Gallus gallus GN=CCT7 PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 7.167e-32 Identity = 75/201 (37.31%), Postives = 122/201 (60.70%), Query Frame = 2 Query: 257 IMHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSCIGT----KFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKK 847 +M +PV++LK+ G +NI A + +A+ +RTTLGPR M K+++D G ++NDG IL+ LDV HPAAK++++++++QD EVGDGTTSV +LA E L + ++++ HP +I RA+ A + AV + IA+++ D+ L++ C T K SQ + + + +DA + DL Q L+ + IKK Sbjct: 1 MMPTPVILLKEGTDTSQGIPQLVSNINACQVIAEAVRTTLGPRGMDKLIVDDRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKDIAVSVKKEDKDEQRSLLEKCAATALSSKLISQSKEFFSKMVVDAVMMLD-DLLQ-LKMIGIKK 199
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPH_BOVIN (T-complex protein 1 subunit eta OS=Bos taurus GN=CCT7 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 7.167e-32 Identity = 75/201 (37.31%), Postives = 122/201 (60.70%), Query Frame = 2 Query: 257 IMHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSC----IGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKK 847 +M +PV++LK+ G +NI A + +A+ +RTTLGPR M K+++D G ++NDG IL+ LDV HPAAK++++++++QD EVGDGTTSV +LA E L + ++++ HP +I RA+ A + AV + +IA+ + D+ L++ C + +K SQ A + +DA + DL Q L+ + IKK Sbjct: 1 MMPTPVILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLD-DLLQ-LKMIGIKK 199
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPH_PONAB (T-complex protein 1 subunit eta OS=Pongo abelii GN=CCT7 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.223e-31 Identity = 75/201 (37.31%), Postives = 122/201 (60.70%), Query Frame = 2 Query: 257 IMHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSC----IGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKK 847 +M +PV++LK+ G +NI A + +A+ +RTTLGPR M K+++D G ++NDG IL+ LDV HPAAK++++++++QD EVGDGTTSV +LA E L + ++++ HP +I RA+ A + AV + +IA+ + D+ L++ C + +K SQ A + +DA + DL Q L+ + IKK Sbjct: 1 MMPTPVILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLD-DLLQ-LKMIGIKK 199 The following BLAST results are available for this feature:
BLAST of DY305487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 153
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305487 ID=DY305487; Name=DY305487; organism=Citrus sinensis; type=EST; length=1254bpback to top |