DY305485
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305485 vs. ExPASy Swiss-Prot
Match: FABF_RHIME (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Rhizobium meliloti GN=fabF PE=3 SV=2) HSP 1 Score: 135.961 bits (341), Expect = 4.116e-31 Identity = 84/200 (42.00%), Postives = 110/200 (55.00%), Query Frame = 1 Query: 4 IGLGGFVACRALSQRNND-PTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRG-LRVNSTKSMIGHLLXXXXXXXXXXXXXXXRTGWIHPNINLENPDGVVDTNV-LVGPKKERLEVKAAL 594 I L GF AC+ALS ++ND P KASRP+D +RDGFVM HA+ RGAKIYAE G + DA+H+T P DG G C++ AL +GV+ D++YINAH TST A D E A+ G + + ++STKS IGHLL R P +NL+NP V+T + LV + E+ AL Sbjct: 204 ISLAGFAACKALSTQHNDNPEKASRPYDADRDGFVMGEGAGIVVLEELEHARARGAKIYAEVIGYGLSGDAFHITAPSEDGEGAYRCMQMALKRAGVTAADIDYINAHGTSTMA-DTIELGAVERLVGDSASRISMSSTKSAIGHLLGAAGAVEAIFSALAIRDNIAPPTLNLDNPS--VETKIDLVPHVARKREINVAL 400
BLAST of DY305485 vs. ExPASy Swiss-Prot
Match: KASM_ARATH (3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Arabidopsis thaliana GN=KAS PE=1 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 1.014e-29 Identity = 74/202 (36.63%), Postives = 109/202 (53.96%), Query Frame = 1 Query: 1 AIGLGGFVACRALSQR-NNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR---GLRVNSTKSMIGHLLXXXXXXXXXXXXXXXRTGWIHPNINLENPDGVVDTNVLVGPKKERLEVKAAL 594 A+ + GF RALS + N+ P +ASRP+D +RDGFV+ HAK+RGAKIYAE G + DA+H+T+P DG G +L + +AL SG+ ++Y+NAHATSTP GD E +A+ F ++ L +STK GHLL G +N++NPD + D + +++ V+ A+ Sbjct: 242 ALSVAGFSRSRALSTKFNSSPQEASRPFDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAM 443
BLAST of DY305485 vs. ExPASy Swiss-Prot
Match: FABF_BACSU (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Bacillus subtilis GN=fabF PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.912e-28 Identity = 76/180 (42.22%), Postives = 97/180 (53.89%), Query Frame = 1 Query: 4 IGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLXXXXXXXXXXXXXXXRTGWIHPNINLENPDGVVD 540 + GF A +ALS N DP ASRP+D NRDGFVM HA RGAKIY E G T DAYH+T P DG G +++A+ +G++ E+++YINAH TST D E A+ FG++ L V+STKSM GHLL + G I P IN++ PD D Sbjct: 198 MSFAGFSANKALST-NPDPKTASRPFDKNRDGFVMGEGAGIIVLEELEHALARGAKIYGEIVGYGSTGDAYHITAPAQDGEGGARAMQEAIKDAGIAPEEIDYINAHGTSTYYNDKYETMAIKTVFGEHAHKLAVSSTKSMTGHLLGAAGGIEAIFSILAIKEGVIPPTINIQTPDEECD 376
BLAST of DY305485 vs. ExPASy Swiss-Prot
Match: FABF_STAAU (3-oxoacyl-[acyl-carrier-protein] synthase 2 (Fragment) OS=Staphylococcus aureus GN=fabF PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 2.114e-27 Identity = 72/184 (39.13%), Postives = 99/184 (53.80%), Query Frame = 1 Query: 4 IGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQ-NRGLRVNSTKSMIGHLLXXXXXXXXXXXXXXXRTGWIHPNINLENPDGVVDTNVL 552 + + GF A RALS N+D A RP+ RDGFVM A+ RGA IYAE G T DAYH+T P P+G G ++ A+ +G+ +DV Y+NAH TSTP GD+ E +A+ + FG+ + L+V+STKSM GHLL + I P I+ PD D +++ Sbjct: 192 MAIAGFSASRALST-NDDIETACRPFQEGRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKIAPTIHAVTPDPECDLDIV 374
BLAST of DY305485 vs. ExPASy Swiss-Prot
Match: FABF_STAAW (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain MW2) GN=fabF PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 2.761e-27 Identity = 71/184 (38.59%), Postives = 99/184 (53.80%), Query Frame = 1 Query: 4 IGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQ-NRGLRVNSTKSMIGHLLXXXXXXXXXXXXXXXRTGWIHPNINLENPDGVVDTNVL 552 + + GF A RALS N+D A RP+ RDGFVM A+ RGA IYAE G T DAYH+T P P+G G ++ A+ +G+ +DV Y+NAH TSTP GD+ E +A+ + FG+ + L+V+STKSM GHLL + + P I+ PD D +++ Sbjct: 199 MAIAGFSASRALST-NDDIETACRPFQEGRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIV 381
BLAST of DY305485 vs. ExPASy Swiss-Prot
Match: FABF_STAAS (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain MSSA476) GN=fabF PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 2.761e-27 Identity = 71/184 (38.59%), Postives = 99/184 (53.80%), Query Frame = 1 Query: 4 IGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQ-NRGLRVNSTKSMIGHLLXXXXXXXXXXXXXXXRTGWIHPNINLENPDGVVDTNVL 552 + + GF A RALS N+D A RP+ RDGFVM A+ RGA IYAE G T DAYH+T P P+G G ++ A+ +G+ +DV Y+NAH TSTP GD+ E +A+ + FG+ + L+V+STKSM GHLL + + P I+ PD D +++ Sbjct: 199 MAIAGFSASRALST-NDDIETACRPFQEGRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIV 381
BLAST of DY305485 vs. ExPASy Swiss-Prot
Match: FABF_STAAR (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain MRSA252) GN=fabF PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 2.761e-27 Identity = 71/184 (38.59%), Postives = 99/184 (53.80%), Query Frame = 1 Query: 4 IGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQ-NRGLRVNSTKSMIGHLLXXXXXXXXXXXXXXXRTGWIHPNINLENPDGVVDTNVL 552 + + GF A RALS N+D A RP+ RDGFVM A+ RGA IYAE G T DAYH+T P P+G G ++ A+ +G+ +DV Y+NAH TSTP GD+ E +A+ + FG+ + L+V+STKSM GHLL + + P I+ PD D +++ Sbjct: 199 MAIAGFSASRALST-NDDIETACRPFQEGRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIV 381
BLAST of DY305485 vs. ExPASy Swiss-Prot
Match: FABF_STAAN (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain N315) GN=fabF PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 2.761e-27 Identity = 71/184 (38.59%), Postives = 99/184 (53.80%), Query Frame = 1 Query: 4 IGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQ-NRGLRVNSTKSMIGHLLXXXXXXXXXXXXXXXRTGWIHPNINLENPDGVVDTNVL 552 + + GF A RALS N+D A RP+ RDGFVM A+ RGA IYAE G T DAYH+T P P+G G ++ A+ +G+ +DV Y+NAH TSTP GD+ E +A+ + FG+ + L+V+STKSM GHLL + + P I+ PD D +++ Sbjct: 199 MAIAGFSASRALST-NDDIETACRPFQEGRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIV 381
BLAST of DY305485 vs. ExPASy Swiss-Prot
Match: FABF_STAAM (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=fabF PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 2.761e-27 Identity = 71/184 (38.59%), Postives = 99/184 (53.80%), Query Frame = 1 Query: 4 IGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQ-NRGLRVNSTKSMIGHLLXXXXXXXXXXXXXXXRTGWIHPNINLENPDGVVDTNVL 552 + + GF A RALS N+D A RP+ RDGFVM A+ RGA IYAE G T DAYH+T P P+G G ++ A+ +G+ +DV Y+NAH TSTP GD+ E +A+ + FG+ + L+V+STKSM GHLL + + P I+ PD D +++ Sbjct: 199 MAIAGFSASRALST-NDDIETACRPFQEGRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIV 381
BLAST of DY305485 vs. ExPASy Swiss-Prot
Match: FABF_STAAC (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain COL) GN=fabF PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 2.761e-27 Identity = 71/184 (38.59%), Postives = 99/184 (53.80%), Query Frame = 1 Query: 4 IGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQ-NRGLRVNSTKSMIGHLLXXXXXXXXXXXXXXXRTGWIHPNINLENPDGVVDTNVL 552 + + GF A RALS N+D A RP+ RDGFVM A+ RGA IYAE G T DAYH+T P P+G G ++ A+ +G+ +DV Y+NAH TSTP GD+ E +A+ + FG+ + L+V+STKSM GHLL + + P I+ PD D +++ Sbjct: 199 MAIAGFSASRALST-NDDIETACRPFQEGRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIV 381 The following BLAST results are available for this feature:
BLAST of DY305485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305485 ID=DY305485; Name=DY305485; organism=Citrus sinensis; type=EST; length=1144bpback to top |