EY702546

Overview
NameEY702546
Unique NameEY702546
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702546 vs. ExPASy Swiss-Prot
Match: ADF6_ORYSJ (Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica GN=ADF6 PE=2 SV=2)

HSP 1 Score: 190.274 bits (482), Expect = 1.754e-50
Identity = 86/119 (72.27%), Postives = 108/119 (90.76%), Query Frame = 1
Query:  127 ELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFSAWAPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDLFKDRA 483
            ELK+KR++RFI FKI+E+ +QV+V++LG+P  TY+DF AS+PA ECRYAV+D+DFVT ENCQKS+IFF +W+PDT++VRSKM+YASSKDRFKRELDGIQVELQATDPSEM +D+ K RA
Sbjct:   20 ELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMPASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSMDIVKARA 138          

HSP 2 Score: 31.187 bits (69), Expect = 1.754e-50
Identity = 14/26 (53.85%), Postives = 21/26 (80.77%), Query Frame = 3
Query:   69 MANAASGMAVHDDCKLEGGGVESQEN 146
            MAN+ASGMAV D+CKL+   ++S+ +
Sbjct:    1 MANSASGMAVGDECKLKFQELKSKRS 26          
BLAST of EY702546 vs. ExPASy Swiss-Prot
Match: ADF_LILLO (Actin-depolymerizing factor OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 3.885e-50
Identity = 88/119 (73.95%), Postives = 105/119 (88.24%), Query Frame = 1
Query:  127 ELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFSAWAPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDLFKDRA 483
            ELKAKR +RFIVFKIEEK +QV VE+LG+P ++Y+DF   LP  ECRYAV+D+DFVT ENCQKS+IFF +W+PDT+RVRSKM+YAS+KDRFKRELDGIQVELQATDPSEM +D+ K RA
Sbjct:   20 ELKAKRNFRFIVFKIEEKVQQVTVERLGQPNESYDDFTECLPPNECRYAVFDFDFVTDENCQKSKIFFISWSPDTSRVRSKMLYASTKDRFKRELDGIQVELQATDPSEMSMDIIKARA 138          

HSP 2 Score: 30.8018 bits (68), Expect = 3.885e-50
Identity = 13/26 (50.00%), Postives = 21/26 (80.77%), Query Frame = 3
Query:   69 MANAASGMAVHDDCKLEGGGVESQEN 146
            MAN++SGMAV D+CKL+   ++++ N
Sbjct:    1 MANSSSGMAVDDECKLKFMELKAKRN 26          
BLAST of EY702546 vs. ExPASy Swiss-Prot
Match: ADF7_ARATH (Actin-depolymerizing factor 7 OS=Arabidopsis thaliana GN=ADF7 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 3.885e-50
Identity = 87/119 (73.11%), Postives = 104/119 (87.39%), Query Frame = 1
Query:  127 ELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFSAWAPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDLFKDRA 483
            ELK+KR YRFI+F+I+ +Q  V+VEKLG P +TY+DF ASLPA ECRYAV+D+DF+T ENCQKS+IFF AW+PD++RVR KM+YASSKDRFKRELDGIQVELQATDPSEM  D+ K RA
Sbjct:   20 ELKSKRNYRFIIFRIDGQQ--VVVEKLGNPDETYDDFTASLPANECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKSRA 136          

HSP 2 Score: 34.2686 bits (77), Expect = 3.885e-50
Identity = 16/26 (61.54%), Postives = 21/26 (80.77%), Query Frame = 3
Query:   69 MANAASGMAVHDDCKLEGGGVESQEN 146
            MANAASGMAV D+CKL+   ++S+ N
Sbjct:    1 MANAASGMAVEDECKLKFLELKSKRN 26          
BLAST of EY702546 vs. ExPASy Swiss-Prot
Match: ADF12_ARATH (Actin-depolymerizing factor 12 OS=Arabidopsis thaliana GN=ADF12 PE=2 SV=2)

HSP 1 Score: 179.104 bits (453), Expect = 1.015e-47
Identity = 86/119 (72.27%), Postives = 100/119 (84.03%), Query Frame = 1
Query:  127 ELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFSAWAPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDLFKDRA 483
            ELKAKR YRFI+F+I+ +Q  V+VEKLG P + Y+DF   LP  ECRYAVYD+DF TAEN QKS+IFF AW+PD++RVR KM+YASSKDRFKRELDGIQVELQATDPSEM LD+ K RA
Sbjct:   20 ELKAKRNYRFIIFRIDGQQ--VVVEKLGSPQENYDDFTNYLPPNECRYAVYDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEMSLDIIKSRA 136          

HSP 2 Score: 33.113 bits (74), Expect = 1.015e-47
Identity = 15/26 (57.69%), Postives = 21/26 (80.77%), Query Frame = 3
Query:   69 MANAASGMAVHDDCKLEGGGVESQEN 146
            MANAASGMAV D+CKL+   ++++ N
Sbjct:    1 MANAASGMAVEDECKLKFLELKAKRN 26          
BLAST of EY702546 vs. ExPASy Swiss-Prot
Match: ADF9_ORYSJ (Actin-depolymerizing factor 9 OS=Oryza sativa subsp. japonica GN=ADF9 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.247e-47
Identity = 84/120 (70.00%), Postives = 104/120 (86.67%), Query Frame = 1
Query:  127 ELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFSAWAPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDLFKDRAN 486
            ELK +R +RFIVFKI++K  ++ VE+LG+  + YEDFAA+LPA+ECRYAVYD DFVT ENCQKS+IFF +W+PDTAR RSKM+YASSKDRF+RELDGIQ E+QATDPSEM LD+ + RA+
Sbjct:   20 ELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATLPADECRYAVYDLDFVTDENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCEIQATDPSEMSLDIIRARAH 139          

HSP 2 Score: 29.261 bits (64), Expect = 2.247e-47
Identity = 11/17 (64.71%), Postives = 16/17 (94.12%), Query Frame = 3
Query:   69 MANAASGMAVHDDCKLE 119
            MAN+ASG+AV+D+CK +
Sbjct:    1 MANSASGLAVNDECKFK 17          
BLAST of EY702546 vs. ExPASy Swiss-Prot
Match: ADF2_MAIZE (Actin-depolymerizing factor 2 OS=Zea mays GN=ADF2 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 4.975e-47
Identity = 82/120 (68.33%), Postives = 102/120 (85.00%), Query Frame = 1
Query:  127 ELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFSAWAPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDLFKDRAN 486
            +LKA+R++RFIVF+I++K  ++ V++LGEP Q Y DF  SLPA+ECRYA+YD DF T ENCQKS+IFF +W+PDTAR RSKM+YASSKDRF+RELDGIQ E+QATDPSEM LD+ K R N
Sbjct:   20 DLKARRSFRFIVFRIDDKDMEIKVDRLGEPNQGYGDFTDSLPADECRYAIYDLDFTTVENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCEIQATDPSEMSLDIVKSRTN 139          

HSP 2 Score: 27.7202 bits (60), Expect = 4.975e-47
Identity = 10/17 (58.82%), Postives = 16/17 (94.12%), Query Frame = 3
Query:   69 MANAASGMAVHDDCKLE 119
            MAN++SG+AV D+CK++
Sbjct:    1 MANSSSGLAVSDECKVK 17          
BLAST of EY702546 vs. ExPASy Swiss-Prot
Match: ADF1_MAIZE (Actin-depolymerizing factor 1 OS=Zea mays GN=ADF1 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.439e-46
Identity = 81/120 (67.50%), Postives = 100/120 (83.33%), Query Frame = 1
Query:  127 ELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFSAWAPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDLFKDRAN 486
            ELK++RT+RFIVF+I++   ++ V++LGEP Q Y DF  SLPA ECRYA+YD DF T ENCQKS+IFF +W+PDTAR RSKM+YASSKDRF+RELDGIQ E+QATDPSEM LD+ + R N
Sbjct:   20 ELKSRRTFRFIVFRIDDTDMEIKVDRLGEPNQGYGDFTDSLPANECRYAIYDLDFTTIENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCEIQATDPSEMSLDIVRSRTN 139          

HSP 2 Score: 28.4906 bits (62), Expect = 2.439e-46
Identity = 10/17 (58.82%), Postives = 17/17 (100.00%), Query Frame = 3
Query:   69 MANAASGMAVHDDCKLE 119
            MAN++SG+AV+D+CK++
Sbjct:    1 MANSSSGLAVNDECKVK 17          
BLAST of EY702546 vs. ExPASy Swiss-Prot
Match: ADF_BRANA (Actin-depolymerizing factor (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.746e-44
Identity = 86/119 (72.27%), Postives = 103/119 (86.55%), Query Frame = 1
Query:  127 ELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFSAWAPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDLFKDRA 483
            ELK KR +RFI+F+I+ +Q  V+VEKLG P +TY+DF ASLPA+ECRYAV+D+DF T ENCQKS+IFF AW+PD++RVR KM+YASSKDRFKRELDGIQVELQATDPSEM  D+ K RA
Sbjct:   10 ELK-KRIFRFIIFRIDGQQ--VVVEKLGNPQETYDDFTASLPADECRYAVFDFDFTTNENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKSRA 125          
BLAST of EY702546 vs. ExPASy Swiss-Prot
Match: ADF_VITVI (Actin-depolymerizing factor OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 5.409e-43
Identity = 72/120 (60.00%), Postives = 108/120 (90.00%), Query Frame = 1
Query:  127 ELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFSAWAPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDLFKDRAN 486
            ELK K+ +R+++FKI+EK+K+V+VEK G P +++++FAA+LP  +CRYAVYD+DFVT+ENCQKS+IFF AW+PD++R+R+KM+YA+SK+RF+RELDG+  E+QATDP+EM L++ ++RA+
Sbjct:   24 ELKRKKVHRYVIFKIDEKKKEVVVEKTGGPAESFDEFAAALPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPDSSRIRAKMLYATSKERFRRELDGVHYEIQATDPTEMDLEVLRERAH 143          
BLAST of EY702546 vs. ExPASy Swiss-Prot
Match: ADF4_ORYSJ (Actin-depolymerizing factor 4 OS=Oryza sativa subsp. japonica GN=ADF4 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 4.758e-41
Identity = 69/118 (58.47%), Postives = 97/118 (82.20%), Query Frame = 1
Query:  127 ELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFSAWAPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDLFKDR 480
            EL++KR +RFI F ++ K K++IV+K+G+ T +YEDF +SLP  +CR+A+YD+DF+TAE+  KSRIF+  W+PD A+VRSKM+YASS +RFK+EL+GIQ+E+QATD  E+ LD  KDR
Sbjct:   20 ELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLPEGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLEVQATDAGEISLDALKDR 137          

HSP 2 Score: 34.2686 bits (77), Expect = 4.758e-41
Identity = 13/24 (54.17%), Postives = 21/24 (87.50%), Query Frame = 3
Query:   69 MANAASGMAVHDDCKLEGGGVESQ 140
            MAN++SG+A+HDDCKL+   ++S+
Sbjct:    1 MANSSSGVAIHDDCKLKFNELQSK 24          
The following BLAST results are available for this feature:
BLAST of EY702546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
ADF6_ORYSJ1.754e-5072.27Actin-depolymerizing factor 6 OS=Oryza sativa subs... [more]
ADF_LILLO3.885e-5073.95Actin-depolymerizing factor OS=Lilium longiflorum ... [more]
ADF7_ARATH3.885e-5073.11Actin-depolymerizing factor 7 OS=Arabidopsis thali... [more]
ADF12_ARATH1.015e-4772.27Actin-depolymerizing factor 12 OS=Arabidopsis thal... [more]
ADF9_ORYSJ2.247e-4770.00Actin-depolymerizing factor 9 OS=Oryza sativa subs... [more]
ADF2_MAIZE4.975e-4768.33Actin-depolymerizing factor 2 OS=Zea mays GN=ADF2 ... [more]
ADF1_MAIZE2.439e-4667.50Actin-depolymerizing factor 1 OS=Zea mays GN=ADF1 ... [more]
ADF_BRANA3.746e-4472.27Actin-depolymerizing factor (Fragment) OS=Brassica... [more]
ADF_VITVI5.409e-4360.00Actin-depolymerizing factor OS=Vitis vinifera PE=2... [more]
ADF4_ORYSJ4.758e-4158.47Actin-depolymerizing factor 4 OS=Oryza sativa subs... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-009-C09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702546 ID=EY702546; Name=EY702546; organism=Citrus sinensis; type=EST; length=875bp
CAACAAACTTTCCTTCACCTTGCAAAATTTCTCTGTACTTTGCTTCTTAG
ATCTTGATCCTAGAAACCATGGCTAATGCTGCTTCTGGGATGGCTGTACA
TGATGACTGTAAGCTAGAGGGCGGGGGAGTTGAAAGCCAAGAGAACCTAC
CGCTTCATAGTATTTAAGATTGAGGAGAAGCAGAAGCAGGTCATTGTGGA
AAAACTTGGTGAGCCAACTCAAACCTATGAAGATTTTGCTGCCAGCCTTC
CTGCTGAGGAGTGCCGATATGCTGTGTATGATTATGATTTTGTTACCGCA
GAGAACTGCCAAAAAAGCAGGATTTTCTTCAGTGCATGGGCTCCCGACAC
TGCAAGAGTAAGAAGCAAGATGATTTATGCAAGCTCCAAGGACAGGTTCA
AGAGAGAGCTAGATGGCATTCAAGTGGAGCTGCAGGCAACTGATCCATCT
GAGATGGGTCTTGACCTATTTAAAGACCGTGCCAACTAAATAAAGGCTCC
TGATCTCAGCAATTGAGATTGGTTTTATCTTTTGTGCTTTACCTAAAGGT
GAAATGTTAATAGTTTGTGGCGGCAGCTTGAATCTAACTGAATTATGATA
TTGGTTTGGTGTTCAAGTTTCCCCGATGCAGTATTCTCCTCTAGAACCAT
TTCAGGGGCCTTTATGATGGCTCTATTGATTCTGCCGGGGCGTGCAACTT
ATCCGATGAGCGGCTACTTATACCCATTCCCCCAGCTCACGCGTTTCAAC
TGATGGGGGATGGAATACCCTCCTGGTAAGGGTGTTTTTACCTTAAAAAT
GGAGGTTCACTTTTGAACTTTATAAAGGAGGCTTCATTCTCCTCGCTAAA
AAAAAAAAAAAAAAAAGGCGCCCCC
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