DY305476
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_POPAL (Cytochrome c biogenesis protein ccsA OS=Populus alba GN=ccsA PE=3 SV=1) HSP 1 Score: 339.732 bits (870), Expect = 2.013e-92 Identity = 171/250 (68.40%), Postives = 191/250 (76.40%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSL--SARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 SDLYE IH + FK ++N+LS ITAPS FFTQGFAT G LT MHQS+ILVPALQ QWL+MHVSMMV GY LVITFRKVIR+ K N + N SF EIQYM EKK++F N+ S+RNYYR+Q+IQQLD W +RI+S+GF+FLT GILSGAVWANEAWGSYWNWDPKETWAFITWTIF IY HTRTN EG+NSAIVAS+GFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 69 SDLYESLIFLSWIFSIIHMVPYFKKHKNYLSTITAPSTFFTQGFATWGLLTDMHQSKILVPALQSQWLIMHVSMMVSGYAALLCGSLLSAALLVITFRKVIRIVGKNNNLL--NDSFPVDEIQYMMEKKSIFKNTFFPSSRNYYRFQLIQQLDHWGFRILSIGFLFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYFHTRTNKNLEGLNSAIVASIGFLIIWICYFGVNLLGIGLHSYGSF 316
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_CUCSA (Cytochrome c biogenesis protein ccsA OS=Cucumis sativus GN=ccsA PE=3 SV=1) HSP 1 Score: 337.421 bits (864), Expect = 8.960e-92 Identity = 173/252 (68.65%), Postives = 189/252 (75.00%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLS--AITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 SDLYE IH FK +NHLS AITAPS FTQGFATSGFLT+MHQS +LVPALQ WLMMHVSMMVLGY +VITF+K IR+F K N + N F F+EIQY+NE N+ S++NYY+ Q+IQQLD WSYRIISLGFIFL+ GILSGAVWANE WGSYWNWDPKETWAFITWTIF IYLHTRTN +EGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 69 SDLYESLLFLSWAFSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGFATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYAALLCGSLFSVALIVITFQKAIRIFCKNNNLL--NALFSFNEIQYINEGNYFVRNTSFFSSKNYYKSQLIQQLDHWSYRIISLGFIFLSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 318 HSP 2 Score: 22.7126 bits (47), Expect = 8.960e-92 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = -2 Query: 878 SSERGMTATAFC 913 SSE+GM AT FC Sbjct: 40 SSEKGMIATFFC 51
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_POPTR (Cytochrome c biogenesis protein ccsA OS=Populus trichocarpa GN=ccsA PE=3 SV=1) HSP 1 Score: 337.421 bits (864), Expect = 9.990e-92 Identity = 170/250 (68.00%), Postives = 190/250 (76.00%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSL--SARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 SDLYE IH + FK ++N+LS ITAPS FFTQGFAT G LT MHQS+ILVPALQ QWL+MHVSMMV GY LVITFRKVIR+ K N + N SF EIQYM EKK++ N+ S+RNYYR+Q+IQQLD W +RI+S+GF+FLT GILSGAVWANEAWGSYWNWDPKETWAFITWTIF IY HTRTN EG+NSAIVAS+GFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 69 SDLYESLIFLSWIFSIIHMVPYFKKHKNYLSTITAPSTFFTQGFATWGLLTDMHQSKILVPALQSQWLIMHVSMMVSGYAALLCGSLLSAALLVITFRKVIRIVGKNNNLL--NDSFPVDEIQYMMEKKSILKNTFFPSSRNYYRFQLIQQLDHWGFRILSIGFLFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYFHTRTNKNLEGLNSAIVASIGFLIIWICYFGVNLLGIGLHSYGSF 316
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_CERDE (Cytochrome c biogenesis protein ccsA OS=Ceratophyllum demersum GN=ccsA PE=3 SV=1) HSP 1 Score: 332.028 bits (850), Expect = 1.989e-91 Identity = 168/250 (67.20%), Postives = 188/250 (75.20%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 S+LYE IH + F N++N LS IT PSA FTQGFATSG LT+MHQS ILVPALQ QWLMMHVSMM+L Y LVITFR+ I LF KR + G F F EIQY+NEK++V N+ LS +NY+RYQ+ ++LD WSYRIISLGF FLT GILSGAVWANEAWGSYWNWDPKETWAFITWT+F IYLHTRTN ++ NSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 69 SNLYESLMFLSWSFSIIHMVPYFGNHKNDLSVITNPSAIFTQGFATSGLLTEMHQSSILVPALQSQWLMMHVSMMLLSYAALLCGSLLSVALLVITFRQSIDLFFKRDQLL--TGGFSFGEIQYLNEKRSVLQNTSFLSFKNYHRYQLTRRLDHWSYRIISLGFTFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTVFAIYLHTRTNQNFQSANSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 316 HSP 2 Score: 26.9498 bits (58), Expect = 1.989e-91 Identity = 21/64 (32.81%), Postives = 29/64 (45.31%), Query Frame = -2 Query: 815 IYLFVCFNGISIY-LIPFYSMIQRAIA----SSERGMTATAFCXXXXXXXXXXXLETFPIXVIY 991 I + F+ ISI LI F +++ I SSE+GM AT FC FP+ +Y Sbjct: 9 ILTHISFSIISIVILIHFMALLGHEIVGLRDSSEKGMIATFFCITGLLVSRWSYSGHFPLSNLY 72
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_LIRTU (Cytochrome c biogenesis protein ccsA OS=Liriodendron tulipifera GN=ccsA PE=3 SV=1) HSP 1 Score: 333.183 bits (853), Expect = 1.884e-90 Identity = 172/250 (68.80%), Postives = 188/250 (75.20%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 SDLYE IH + N++N LSAITAPSA FTQGFATSG T+MHQS ILVPALQ QWLMMHVSMM+L Y LVITFRK I + K + + GSF F EI Y+NEK+NV N+ LS RNY+RYQ+ Q+LD WSYR+ISLGF FLT GILSGAVWANEAWGSYWNWDPKETWAFITWTIF IYLHTRTN +GVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 69 SDLYESLMFLSWSFSIIHMVPKIWNHKNDLSAITAPSAIFTQGFATSGLSTEMHQSAILVPALQSQWLMMHVSMMLLSYAALLCGSLLSVALLVITFRKNIGIVGKSNHLLI--GSFSFDEIHYLNEKRNVLQNTSFLSFRNYHRYQLTQRLDYWSYRVISLGFTFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHTRTNRSLQGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 316
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_ACOCL (Cytochrome c biogenesis protein ccsA OS=Acorus calamus GN=ccsA PE=3 SV=1) HSP 1 Score: 330.487 bits (846), Expect = 1.221e-89 Identity = 169/250 (67.60%), Postives = 189/250 (75.60%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSL--SARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 SDLYE IH + F+N++NH SAITAPSA FTQGFATSG LT+MHQS ILVPALQ QWLMMHVSMM+L Y LVITFRK +F KR NF+ SF F EI+Y+NEK++V N+ S NY++YQ+ Q+LD WSYR+ISLGFIFLT GILSGAVWANEAWGSYWNWDPKE WAFITW IF IYLHTRTN +G NSAIVAS+GFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 69 SDLYESLIFLSWSFSIIHMVPYFRNHRNHFSAITAPSAIFTQGFATSGLLTEMHQSIILVPALQSQWLMMHVSMMLLSYAALLCGSLLSVALLVITFRKNSDIFDKRNNFLI--RSFFFGEIEYLNEKRSVLQNTSFDSFTNYHKYQLTQRLDFWSYRVISLGFIFLTIGILSGAVWANEAWGSYWNWDPKEIWAFITWAIFAIYLHTRTNHSLQGANSAIVASIGFLIIWICYFGVNLLGIGLHSYGSF 316
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_ACOAM (Cytochrome c biogenesis protein ccsA OS=Acorus americanus GN=ccsA PE=3 SV=1) HSP 1 Score: 330.487 bits (846), Expect = 1.221e-89 Identity = 169/250 (67.60%), Postives = 189/250 (75.60%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSL--SARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 SDLYE IH + F+N++NH SAITAPSA FTQGFATSG LT+MHQS ILVPALQ QWLMMHVSMM+L Y LVITFRK +F KR NF+ SF F EI+Y+NEK++V N+ S NY++YQ+ Q+LD WSYR+ISLGFIFLT GILSGAVWANEAWGSYWNWDPKE WAFITW IF IYLHTRTN +G NSAIVAS+GFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 69 SDLYESLIFLSWSFSIIHMVPYFRNHRNHFSAITAPSAIFTQGFATSGLLTEMHQSIILVPALQSQWLMMHVSMMLLSYAALLCGSLLSVALLVITFRKNSDIFDKRNNFLI--RSFFFGEIEYLNEKRSVLQNTSFDSFTNYHKYQLTQRLDFWSYRVISLGFIFLTIGILSGAVWANEAWGSYWNWDPKEIWAFITWAIFAIYLHTRTNHSLQGANSAIVASIGFLIIWICYFGVNLLGIGLHSYGSF 316
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_NANDO (Cytochrome c biogenesis protein ccsA OS=Nandina domestica GN=ccsA PE=3 SV=1) HSP 1 Score: 328.946 bits (842), Expect = 1.825e-89 Identity = 169/250 (67.60%), Postives = 187/250 (74.80%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 SDLYE IH + F N++N LS ITAPSA FTQGFATSG LT+MH+S LVPALQ QWLMMHVSMM+L Y LVITFRK + F K K+ + G F F EI+Y+NE NV N+ +S RN+ RYQVIQQLD WS R+ISLGFIFLT GILSGAVWANEAWGSYWNWDPKETWAFITWTIF IYLHTRTN +G+NSAIVAS+GFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 69 SDLYESLMFLSWSFSIIHMVPYFTNHKNLLSTITAPSAIFTQGFATSGLLTEMHRSTKLVPALQSQWLMMHVSMMILSYAALLCGSLLSIALLVITFRKNVENFGKSKSNPFLIGPFSFGEIKYVNEINNVLRNTFLISFRNFRRYQVIQQLDCWSCRVISLGFIFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNLQGINSAIVASIGFLIIWICYFGVNLLGIGLHSYGSF 318 HSP 2 Score: 23.483 bits (49), Expect = 1.825e-89 Identity = 15/53 (28.30%), Postives = 24/53 (45.28%), Query Frame = -2 Query: 815 ISIYLIPFYSMIQRAIA---SSERGMTATAFCXXXXXXXXXXXLETFPIXVIY 964 I+IYL+ ++ + SSE+G+ AT FC FP+ +Y Sbjct: 22 ITIYLMTL--LVHETVGLYDSSEKGLIATFFCITGFLVIRWIYSGHFPLSDLY 72
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_SPIOL (Cytochrome c biogenesis protein ccsA OS=Spinacia oleracea GN=ccsA PE=3 SV=1) HSP 1 Score: 327.02 bits (837), Expect = 1.350e-88 Identity = 171/252 (67.86%), Postives = 189/252 (75.00%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDF-KNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRK-VIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSA--RNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 SDLYE IH I F K +N L+ ITAPSA FTQGFATSG LT+MHQS ILVPALQ QWLMMHVSMMVLGY L+I F+K +I++F KRK+ + N SF F EIQY+NEK N+ N+ + RNYYR Q+I+QLD WSYR+ISLGFIFLT GILSGAVWANEAWGSYWNWDPKETWAFITWTIF IYLH RTN G NSAIVA +GFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 69 SDLYESLIFLSWSFYLIHMIPSFLKKEKNSLNVITAPSAIFTQGFATSGLLTEMHQSGILVPALQSQWLMMHVSMMVLGYAALLGGSLLSVTLLIIIFQKDLIQVFDKRKHLL--NESFFFGEIQYINEKSNIVQNASPSYVRNYYRSQLIEQLDHWSYRVISLGFIFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHIRTNKNLRGANSAIVAFIGFLIIWICYFGVNLLGIGLHSYGSF 318
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_OENEH (Cytochrome c biogenesis protein ccsA OS=Oenothera elata subsp. hookeri GN=ccsA PE=3 SV=1) HSP 1 Score: 325.094 bits (832), Expect = 5.131e-88 Identity = 165/253 (65.22%), Postives = 188/253 (74.31%), Query Frame = -1 Query: 72 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSFN*H 824 S+LYE IH FK ++++ IT+ S FTQG TSG L++M QS ILVPALQ QWLMMHVSMMVLGY LVITFRK +R+F K+K F+ SF F EIQY NE NV L++ +S++NYYR Q+IQQLDRWS RIISLGFIFLT GILSGAVWANEAWGSYWNWDPKETWAFITWT+F IYLHTRTN ++ VNSAIVA +GF+IIWICYFGVNLLGIGLHSYGSFN H Sbjct: 69 SNLYESLLFLSWSFAIIHMFPYFKKQKSYVRTITSSSTIFTQGLVTSGLLSEMQQSEILVPALQSQWLMMHVSMMVLGYAALLCGSLLSVALLVITFRKALRIFSKKKAFL--KDSFSFVEIQYRNEPSNVLLSTSFISSKNYYRAQLIQQLDRWSSRIISLGFIFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTMFAIYLHTRTNPNFQSVNSAIVAFLGFIIIWICYFGVNLLGIGLHSYGSFNLH 319 The following BLAST results are available for this feature:
BLAST of DY305476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 141
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305476 ID=DY305476; Name=DY305476; organism=Citrus sinensis; type=EST; length=1202bpback to top |