DY305462

Overview
NameDY305462
Unique NameDY305462
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1115
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: TIE2_BOVIN (Angiopoietin-1 receptor OS=Bos taurus GN=TEK PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.473e-17
Identity = 46/110 (41.82%), Postives = 66/110 (60.00%), Query Frame = 1
Query:   28 NVLKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVT-AKVPYDSMT 354
            + L   QLL FA D+ +GM+YL Q   IHRDL   N+L+  + V K+ADFG++R Q      T      RWMA E +N+ +Y   +DV+S+ ++LWE+V+    PY  MT
Sbjct:  935 STLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 1044          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: CSK_RAT (Tyrosine-protein kinase CSK OS=Rattus norvegicus GN=Csk PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.473e-17
Identity = 48/116 (41.38%), Postives = 72/116 (62.07%), Query Frame = 1
Query:    7 DYLH-KNHNVLKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETG--TYRWMAPEVINHQLYDQKADVFSFAIVLWELVT-AKVPY 342
            DYL  +  +VL    LL+F++D+C+ MEYL  +N +HRDL   N+L+   NV KV+DFG+     K    T +TG    +W APE +  + +  K+DV+SF I+LWE+ +  +VPY
Sbjct:  276 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL----TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 387          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: CSK_HUMAN (Tyrosine-protein kinase CSK OS=Homo sapiens GN=CSK PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.473e-17
Identity = 48/116 (41.38%), Postives = 72/116 (62.07%), Query Frame = 1
Query:    7 DYLH-KNHNVLKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETG--TYRWMAPEVINHQLYDQKADVFSFAIVLWELVT-AKVPY 342
            DYL  +  +VL    LL+F++D+C+ MEYL  +N +HRDL   N+L+   NV KV+DFG+     K    T +TG    +W APE +  + +  K+DV+SF I+LWE+ +  +VPY
Sbjct:  276 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL----TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 387          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: CSK_CHICK (Tyrosine-protein kinase CSK OS=Gallus gallus GN=CSK PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.473e-17
Identity = 47/116 (40.52%), Postives = 72/116 (62.07%), Query Frame = 1
Query:    7 DYLH-KNHNVLKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETG--TYRWMAPEVINHQLYDQKADVFSFAIVLWELVT-AKVPY 342
            DYL  +  +VL    LL+F++D+C+ MEYL  +N +HRDL   N+L+   N+ KV+DFG+     K    T +TG    +W APE +  + +  K+DV+SF I+LWE+ +  +VPY
Sbjct:  276 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNIAKVSDFGL----TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 387          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: CSK_BOVIN (Tyrosine-protein kinase CSK OS=Bos taurus GN=CSK PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.473e-17
Identity = 48/116 (41.38%), Postives = 72/116 (62.07%), Query Frame = 1
Query:    7 DYLH-KNHNVLKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETG--TYRWMAPEVINHQLYDQKADVFSFAIVLWELVT-AKVPY 342
            DYL  +  +VL    LL+F++D+C+ MEYL  +N +HRDL   N+L+   NV KV+DFG+     K    T +TG    +W APE +  + +  K+DV+SF I+LWE+ +  +VPY
Sbjct:  276 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL----TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 387          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: Y9957_DICDI (Probable serine/threonine-protein kinase DDB_G0276181 OS=Dictyostelium discoideum GN=DDB_G0276181 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.923e-17
Identity = 50/125 (40.00%), Postives = 70/125 (56.00%), Query Frame = 1
Query:   31 VLKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNV-----VKVADFG--VARFQNKGGVMTAETG--------------TYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPY 342
            V+    +LR A+DI KG+ YLH   I+H D+K+ NLL+ + +      +KVADF   + R +   G     TG              T  WMAPEVI   +Y +K DV+SFAI++WE+VT K+PY
Sbjct: 1127 VIPYKLVLRMALDIAKGLHYLHSLGILHLDMKSPNLLVSSLSTSAKVNIKVADFNTCINRSRITAGFFNRHTGSGDNNKVEKDSKKGTTLWMAPEVIRGAMYSEKCDVYSFAIIMWEMVTRKLPY 1251          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: Y0019_DICDI (Probable serine/threonine-protein kinase DDB_G0278521 OS=Dictyostelium discoideum GN=DDB_G0278521 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.923e-17
Identity = 45/124 (36.29%), Postives = 73/124 (58.87%), Query Frame = 1
Query:   16 HKNHNVLKLSQLLRFAIDICKGMEYLH--QSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMT-AETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQAALGV 378
            + N  +  L  +   +++I  GM YLH  +  IIHRDL + N+L+D + + K+ADFG++RF+N  G  T    G  R+ +PEV   Q Y +K DVF F ++L+E+ T +VP+     + A+  +
Sbjct:  641 NNNDIIQSLPSINTLSLNIANGMNYLHSLKPQIIHRDLTSQNILIDRNGIAKIADFGISRFKNDIGDKTMTSIGNPRFRSPEVTKGQKYSEKVDVFGFGMILYEMFTRRVPFHDYEQIAASFKI 764          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: TIE2_MOUSE (Angiopoietin-1 receptor OS=Mus musculus GN=Tek PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.923e-17
Identity = 45/110 (40.91%), Postives = 66/110 (60.00%), Query Frame = 1
Query:   28 NVLKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVT-AKVPYDSMT 354
            + L   QLL FA D+ +GM+YL Q   IHRDL   N+L+  + + K+ADFG++R Q      T      RWMA E +N+ +Y   +DV+S+ ++LWE+V+    PY  MT
Sbjct:  932 STLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYIAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 1041          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: TIE2_DANRE (Tyrosine-protein kinase receptor Tie-2 OS=Danio rerio GN=tie2 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.923e-17
Identity = 46/114 (40.35%), Postives = 67/114 (58.77%), Query Frame = 1
Query:   16 HKNHNVLKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVT-AKVPYDSMT 354
            H+  + L   QLL F+ D+ +GM YL Q   IHRDL   N+L+  + V K+ADFG++R Q      T      RWMA E +N+ +Y   +DV+S+ ++LWE+V+    PY  MT
Sbjct:  922 HRTASTLSSQQLLAFSADVARGMSYLSQKQFIHRDLAARNVLVGENFVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEVVSLGGTPYCGMT 1035          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: RAF1_RAT (RAF proto-oncogene serine/threonine-protein kinase OS=Rattus norvegicus GN=Raf1 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.923e-17
Identity = 48/120 (40.00%), Postives = 74/120 (61.67%), Query Frame = 1
Query:    1 VYDYLHKNHNVLKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNK-GGVMTAE--TGTYRWMAPEVINHQ---LYDQKADVFSFAIVLWELVTAKVPY 342
            +Y +LH      ++ QL+  A    +GM+YLH  NIIHRD+K+ N+ +     VK+ DFG+A  +++  G    E  TG+  WMAPEVI  Q    +  ++DV+S+ IVL+EL+T ++PY
Sbjct:  429 LYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPY 548          
The following BLAST results are available for this feature:
BLAST of DY305462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TIE2_BOVIN1.473e-1741.82Angiopoietin-1 receptor OS=Bos taurus GN=TEK PE=2 ... [more]
CSK_RAT1.473e-1741.38Tyrosine-protein kinase CSK OS=Rattus norvegicus G... [more]
CSK_HUMAN1.473e-1741.38Tyrosine-protein kinase CSK OS=Homo sapiens GN=CSK... [more]
CSK_CHICK1.473e-1740.52Tyrosine-protein kinase CSK OS=Gallus gallus GN=CS... [more]
CSK_BOVIN1.473e-1741.38Tyrosine-protein kinase CSK OS=Bos taurus GN=CSK P... [more]
Y9957_DICDI1.923e-1740.00Probable serine/threonine-protein kinase DDB_G0276... [more]
Y0019_DICDI1.923e-1736.29Probable serine/threonine-protein kinase DDB_G0278... [more]
TIE2_MOUSE1.923e-1740.91Angiopoietin-1 receptor OS=Mus musculus GN=Tek PE=... [more]
TIE2_DANRE1.923e-1740.35Tyrosine-protein kinase receptor Tie-2 OS=Danio re... [more]
RAF1_RAT1.923e-1740.00RAF proto-oncogene serine/threonine-protein kinase... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1AC09RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305462 ID=DY305462; Name=DY305462; organism=Citrus sinensis; type=EST; length=1115bp
GTGTATGATTACTTGCATAAGAATCATAATGTCTTGAAGTTGTCTCAGTT
GCTGAGGTTTGCAATTGATATTTGCAAAGGAATGGAGTATTTGCATCAAA
GCAACATAATTCATAGGGATCTTAAAACAGCAAATTTGCTAATGGACACT
CACAATGTTGTTAAGGTGGCAGATTTTGGTGTTGCTCGGTTCCAAAACAA
AGGGGGAGTAATGACAGCCGAGACCGGAACATATAGGTGGATGGCACCAG
AGGTTATAAACCACCAGCTGTATGACCAGAAAGCAGATGTCTTCAGTTTC
GCTATCGTACTATGGGAGCTAGTGACAGCCAAGGTTCCATATGATTCCAT
GACTCCTTTACAAGCTGCCCTGGGAGTTAGACAGTGCTCTCTGAGAGGTT
AGAATGCCCCAAGATGTTCATCATGTTCAGTCAAACTGTCATGCGACTGA
ACTTATGAAATTGAATAATGCCTGACCATGTAATTAAGGAGAAGAGCATG
GAGGAAAGATGACTGCTCAAGAAATGTGTGGAAGGGAGTTGGTGCATGAG
CAAAAGAAATTTGAGCTCTAACACTTGTTCTTTTCTCTTGGAATCTTGGT
GTACTCCAACATGCTTAAGCTGCCTTGTGAAAAAAATCCCCGTGTTCATG
TCTAATTGTTACATTACACACTCTCCTTTCCAGGGACTACACCCTGATCT
TCCTGAGAATGCACACCCAAAACTTATAAACTTGATGCAGAGATGTTGGG
ATGCAATTTCTGACAATCCACCATCATTCTCTGGAAATAAACTTGAACTC
CAAGTACTTCCCCCAGAAATTCAGGAGCTGTAAATGGCAACTGGAAAACA
TAAACAATATCTCTAAACCACTCCTTAAAAGAAATCTTTGTTTTTTTTTT
GTCGGTTTAAATTTTTTATAAAGGTTTACAACTGAAAGGAAAAAAAAATT
CCAAAAGGACTTTATTTTCCCACAACATAAAAAAAAAAAAAAGGCGAGTT
CTAAAACCTTTAATTTTCCTTTTTATTTTTTTGTTTCTTTGACCGCCTTT
CCCGGTTTTAAAAATTTTTTTTTTTTTTTTAAATTTGTGGTTCCTAAAAT
TTTTTAACTCGTGTT
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