DY305462

Overview
NameDY305462
Unique NameDY305462
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1115
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig580 contig Csv1_Contig580:90..1204. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: TIE1_MOUSE (Tyrosine-protein kinase receptor Tie-1 OS=Mus musculus GN=Tie1 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 5.596e-17
Identity = 47/114 (41.23%), Postives = 66/114 (57.89%), Query Frame = 1
Query:   16 HKNHNVLKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVT-AKVPYDSMT 354
            H   + L   QLLRFA D   GM+YL +   IHRDL   N+L+  +   K+ADFG++R +      T      RWMA E +N+ +Y  K+DV+SF ++LWE+V+    PY  MT
Sbjct:  941 HGTASTLSSRQLLRFASDAANGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMT 1054          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: TIE1_HUMAN (Tyrosine-protein kinase receptor Tie-1 OS=Homo sapiens GN=TIE1 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 5.596e-17
Identity = 47/114 (41.23%), Postives = 66/114 (57.89%), Query Frame = 1
Query:   16 HKNHNVLKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVT-AKVPYDSMT 354
            H   + L   QLLRFA D   GM+YL +   IHRDL   N+L+  +   K+ADFG++R +      T      RWMA E +N+ +Y  K+DV+SF ++LWE+V+    PY  MT
Sbjct:  945 HGTASTLSSRQLLRFASDAANGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMT 1058          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: TIE1_BOVIN (Tyrosine-protein kinase receptor Tie-1 OS=Bos taurus GN=TIE1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 5.596e-17
Identity = 47/114 (41.23%), Postives = 66/114 (57.89%), Query Frame = 1
Query:   16 HKNHNVLKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVT-AKVPYDSMT 354
            H   + L   QLLRFA D   GM+YL +   IHRDL   N+L+  +   K+ADFG++R +      T      RWMA E +N+ +Y  K+DV+SF ++LWE+V+    PY  MT
Sbjct:  943 HGTASTLSSRQLLRFASDAANGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMT 1056          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: SRMS_MOUSE (Tyrosine-protein kinase Srms OS=Mus musculus GN=Srms PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 5.596e-17
Identity = 53/139 (38.13%), Postives = 82/139 (58.99%), Query Frame = 1
Query:   34 LKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETGT---YRWMAPEVINHQLYDQKADVFSFAIVLWELVT-AKVPYDSMTPLQAALGVRQCSLRG*NAPRCSSCSVKL 438
            L L  LL FA  + +GM YL +  ++HRDL   N+L+      KVADFG+AR   K  V +  +G+    +W APE  N++++ QK+DV+SF I+L+E+ T  + PY+ MT  +    ++Q S RG   PR + C  ++
Sbjct:  326 LSLPHLLGFACQVAEGMSYLEERRVVHRDLAARNVLVGDDLTCKVADFGLARLL-KDDVYSPSSGSKIPVKWTAPEAANYRVFSQKSDVWSFGILLYEVFTYGQCPYEGMTNHET---LQQIS-RGYRLPRPAVCPAEV 459          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: SHKD_DICDI (Dual specificity protein kinase shkD OS=Dictyostelium discoideum GN=shkD PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 5.596e-17
Identity = 50/108 (46.30%), Postives = 69/108 (63.89%), Query Frame = 1
Query:   40 LSQLLRFAIDICKGMEYLHQ-SNIIHRDLKTANLLMDTHNVVKVADFGVAR------FQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPY 342
            L + ++ A D   GM +LH  + I+H DLKTANLL+D +  VKV DFG ++      FQ+K     A  GT  WMAPEV+    Y++KADV+SF I+LWE++T + PY
Sbjct:  373 LFRRMQMAKDAALGMNWLHGITRIVHNDLKTANLLVDINLRVKVTDFGFSQIKEGEEFQDK-----AAKGTPLWMAPEVMMGNPYNEKADVYSFGIILWEILTKEAPY 475          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: CLA4_CANAL (Serine/threonine-protein kinase CLA4 OS=Candida albicans GN=CLA4 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 5.596e-17
Identity = 43/121 (35.54%), Postives = 71/121 (58.68%), Query Frame = 1
Query:    7 DYLHKNHNVLKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFG-VARFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQA 366
            + +  N   L   Q+     +  KG+++LH+ +IIHRD+K+ N+L+D +  VK+ DFG  A+  ++        GT  WMAPEV+  + YD+K DV+S  I+  E++  + PY +  PL+A
Sbjct:  766 EIIENNDFKLNEKQIATICFETLKGLQHLHKKHIIHRDIKSDNVLLDAYGNVKITDFGFCAKLTDQRNKRATMVGTPYWMAPEVVKQKEYDEKVDVWSLGIMTIEMIEGEPPYLNEEPLKA 886          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: RAF_MSV36 (Serine/threonine-protein kinase-transforming protein raf OS=Murine sarcoma virus 3611 GN=V-RAF PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 7.308e-17
Identity = 47/120 (39.17%), Postives = 73/120 (60.83%), Query Frame = 1
Query:    1 VYDYLHKNHNVLKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNK-GGVMTAE--TGTYRWMAPEVINHQ---LYDQKADVFSFAIVLWELVTAKVPY 342
            +Y +LH      ++ QL+  A    +GM+YLH  NIIHRD+K+ N+ +     VK+ DFG+A  +++  G    E  TG+  WMAPEVI  Q    +  ++DV+S+ IVL+EL+  ++PY
Sbjct:  104 LYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDDNPFSFQSDVYSYGIVLYELMAGELPY 223          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: RAF1_MOUSE (RAF proto-oncogene serine/threonine-protein kinase OS=Mus musculus GN=Raf1 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 7.308e-17
Identity = 47/120 (39.17%), Postives = 73/120 (60.83%), Query Frame = 1
Query:    1 VYDYLHKNHNVLKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNK-GGVMTAE--TGTYRWMAPEVINHQ---LYDQKADVFSFAIVLWELVTAKVPY 342
            +Y +LH      ++ QL+  A    +GM+YLH  NIIHRD+K+ N+ +     VK+ DFG+A  +++  G    E  TG+  WMAPEVI  Q    +  ++DV+S+ IVL+EL+  ++PY
Sbjct:  429 LYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDDNPFSFQSDVYSYGIVLYELMAGELPY 548          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: MATK_MOUSE (Megakaryocyte-associated tyrosine-protein kinase OS=Mus musculus GN=Matk PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 7.308e-17
Identity = 41/109 (37.61%), Postives = 69/109 (63.30%), Query Frame = 1
Query:   31 VLKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVT-AKVPYDSMT 354
            ++  SQLL+FA+ + +GMEYL    ++HRDL   N+L+    V KV+DFG+A+ + KG  + +     +W APE + +  +  K+DV+SF ++LWE+ +  + PY  M+
Sbjct:  321 LVSTSQLLQFALHVAEGMEYLESKKLVHRDLAARNILVSEDLVAKVSDFGLAKAERKG--LDSSRLPVKWTAPEALKNGRFSSKSDVWSFGVLLWEVFSYGRAPYPKMS 427          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: MATK_HUMAN (Megakaryocyte-associated tyrosine-protein kinase OS=Homo sapiens GN=MATK PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 7.308e-17
Identity = 40/109 (36.70%), Postives = 69/109 (63.30%), Query Frame = 1
Query:   31 VLKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVT-AKVPYDSMT 354
            ++  +QLL+F++ + +GMEYL    ++HRDL   N+L+    V KV+DFG+A+ + KG  + +     +W APE + H  +  K+DV+SF ++LWE+ +  + PY  M+
Sbjct:  323 LVNTAQLLQFSLHVAEGMEYLESKKLVHRDLAARNILVSEDLVAKVSDFGLAKAERKG--LDSSRLPVKWTAPEALKHGKFTSKSDVWSFGVLLWEVFSYGRAPYPKMS 429          
The following BLAST results are available for this feature:
BLAST of DY305462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TIE1_MOUSE5.596e-1741.23Tyrosine-protein kinase receptor Tie-1 OS=Mus musc... [more]
TIE1_HUMAN5.596e-1741.23Tyrosine-protein kinase receptor Tie-1 OS=Homo sap... [more]
TIE1_BOVIN5.596e-1741.23Tyrosine-protein kinase receptor Tie-1 OS=Bos taur... [more]
SRMS_MOUSE5.596e-1738.13Tyrosine-protein kinase Srms OS=Mus musculus GN=Sr... [more]
SHKD_DICDI5.596e-1746.30Dual specificity protein kinase shkD OS=Dictyostel... [more]
CLA4_CANAL5.596e-1735.54Serine/threonine-protein kinase CLA4 OS=Candida al... [more]
RAF_MSV367.308e-1739.17Serine/threonine-protein kinase-transforming prote... [more]
RAF1_MOUSE7.308e-1739.17RAF proto-oncogene serine/threonine-protein kinase... [more]
MATK_MOUSE7.308e-1737.61Megakaryocyte-associated tyrosine-protein kinase O... [more]
MATK_HUMAN7.308e-1736.70Megakaryocyte-associated tyrosine-protein kinase O... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1AC09RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305462 ID=DY305462; Name=DY305462; organism=Citrus sinensis; type=EST; length=1115bp
GTGTATGATTACTTGCATAAGAATCATAATGTCTTGAAGTTGTCTCAGTT
GCTGAGGTTTGCAATTGATATTTGCAAAGGAATGGAGTATTTGCATCAAA
GCAACATAATTCATAGGGATCTTAAAACAGCAAATTTGCTAATGGACACT
CACAATGTTGTTAAGGTGGCAGATTTTGGTGTTGCTCGGTTCCAAAACAA
AGGGGGAGTAATGACAGCCGAGACCGGAACATATAGGTGGATGGCACCAG
AGGTTATAAACCACCAGCTGTATGACCAGAAAGCAGATGTCTTCAGTTTC
GCTATCGTACTATGGGAGCTAGTGACAGCCAAGGTTCCATATGATTCCAT
GACTCCTTTACAAGCTGCCCTGGGAGTTAGACAGTGCTCTCTGAGAGGTT
AGAATGCCCCAAGATGTTCATCATGTTCAGTCAAACTGTCATGCGACTGA
ACTTATGAAATTGAATAATGCCTGACCATGTAATTAAGGAGAAGAGCATG
GAGGAAAGATGACTGCTCAAGAAATGTGTGGAAGGGAGTTGGTGCATGAG
CAAAAGAAATTTGAGCTCTAACACTTGTTCTTTTCTCTTGGAATCTTGGT
GTACTCCAACATGCTTAAGCTGCCTTGTGAAAAAAATCCCCGTGTTCATG
TCTAATTGTTACATTACACACTCTCCTTTCCAGGGACTACACCCTGATCT
TCCTGAGAATGCACACCCAAAACTTATAAACTTGATGCAGAGATGTTGGG
ATGCAATTTCTGACAATCCACCATCATTCTCTGGAAATAAACTTGAACTC
CAAGTACTTCCCCCAGAAATTCAGGAGCTGTAAATGGCAACTGGAAAACA
TAAACAATATCTCTAAACCACTCCTTAAAAGAAATCTTTGTTTTTTTTTT
GTCGGTTTAAATTTTTTATAAAGGTTTACAACTGAAAGGAAAAAAAAATT
CCAAAAGGACTTTATTTTCCCACAACATAAAAAAAAAAAAAAGGCGAGTT
CTAAAACCTTTAATTTTCCTTTTTATTTTTTTGTTTCTTTGACCGCCTTT
CCCGGTTTTAAAAATTTTTTTTTTTTTTTTAAATTTGTGGTTCCTAAAAT
TTTTTAACTCGTGTT
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