DY305444
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305444 vs. ExPASy Swiss-Prot
Match: THF1_PROMM (Protein thf1 OS=Prochlorococcus marinus (strain MIT 9313) GN=thf1 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 9.373e-16 Identity = 54/188 (28.72%), Postives = 90/188 (47.87%), Query Frame = 1 Query: 16 TVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEQYRIDAQKLEEWARGQTASSLVEFPSKEGE-VEGILNDIAERASGKGNFSYSRFFAVGLFRLLELANATEPTVLEKLCAV-------LNVNKRSVDRDLDVYRN 555 T+A++K F + IPS+Y EL+V+ HL+ +++ + D +FA+G V+D GY + + +F A + DP R AQ+ E RG + + ++G+ L +G F YSR AVGL LL A E + EKL + + +K V++DL++Y++ Sbjct: 6 TIADSKRAFNHDFPHVIPSLYRRTTDELLVELHLLSHQKHFHPDALFAIGLSQVFDVFTSGYRPEAHVKTLFDALCRSCGFDPNALRKQAQQTLESVRGHDLEEVQGWIQQQGKGAPEALAKALRNTAGSTTFHYSRLMAVGLLSLLASAQGDESSDPEKLSQIAHELSESVGFSKARVEKDLNLYKS 193
BLAST of DY305444 vs. ExPASy Swiss-Prot
Match: THF1_SYNSC (Protein thf1 OS=Synechococcus sp. (strain CC9605) GN=thf1 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.829e-11 Identity = 51/186 (27.42%), Postives = 91/186 (48.92%), Query Frame = 1 Query: 16 TVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEQYRIDAQKLEEWARGQTASSLVEFPSKEGEVEGILNDIAERASGKGNFSYSRFFAVGLFRLLELANA------TEPTVLE--KLCAVLNVNKRSVDRDLDVY 549 T+A++K F + + I +Y + EL+V+ HL+ ++ ++ + +F++G TV+D ++GY + +A+F+A ++ D + R L E A+G+ SL ++ S EG YSR AVGL LL+ A A TE V + +L L + V++DL ++ Sbjct: 6 TIADSKRAFHQAFPHVIAPLYRRLADELLVELHLLSHQSRFEANELFSVGLCTVFDTFIKGYRPEAQTDALFRALCSSNGFDAAKLRKTYASLVEQAKGKDPESLKDWLSSHALKEG--------------SHYSRLMAVGLMSLLKAAAADATDSDTEAIVKQSKELAEGLGLPTDRVEKDLTLF 177
BLAST of DY305444 vs. ExPASy Swiss-Prot
Match: THF1_SYNPX (Protein thf1 OS=Synechococcus sp. (strain WH8102) GN=thf1 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.389e-11 Identity = 50/183 (27.32%), Postives = 89/183 (48.63%), Query Frame = 1 Query: 16 TVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEQYRIDAQKLEEWARGQTASSLVEFPSKEGEVEGILNDIAERASGKGNFSYSRFFAVGLFRLLEL-ANATEPTVLE----KLCAVLNVNKRSVDRDLDVY 549 T+A++K F + + I +Y + EL+V+ HL+ ++ T+Q + +FA+G TV++R +GY E A+ A ++ D EQ + AQ + A G + + + ++ +G YSR AVGL LLE ++ ++ + L KL L + V++DL V+ Sbjct: 6 TIADSKRAFHQAFPHVIAPLYRRIADELLVELHLLSHQATFQANSLFAVGLKTVFERFTQGYRPMEHPAALLSALCSSNGFDDEQLKQAAQHCLQDAEGHSDDAFQSWLKEQSLSDGA--------------HYSRLMAVGLLALLEASSDESDASSLRQRAVKLSVDLGLPAERVEKDLTVF 174
BLAST of DY305444 vs. ExPASy Swiss-Prot
Match: THF1_SYNS9 (Protein thf1 OS=Synechococcus sp. (strain CC9902) GN=thf1 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.322e-11 Identity = 46/186 (24.73%), Postives = 94/186 (50.54%), Query Frame = 1 Query: 16 TVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEQYRIDAQKLEEWARGQTASSLVEFPSKEGEVEGILNDIAERASGKGNFSYSRFFAVGLFRLLELA--NATEPTVLE------KLCAVLNVNKRSVDRDLDVY 549 T+A++K F + + I +Y + EL+V+ HL+ ++ +++ P+FA+G TV+D GY +E + A ++ D +R ++++ + A+ ++ V+ + + +A + G+G+ YSR A+G+ RL E A +A +P + +L LN V++DL ++ Sbjct: 6 TIADSKRAFHQAFPHVIAPLYRRLADELLVELHLLSHQSSFKTTPLFAVGLCTVFDTFSAGYRPEEHITGLLDALCSSNGYDANTFRKESKRCIDAAKTES-------------VDAMDSHLAGQKLGEGS-HYSRLMAIGVLRLFEEAKGDADQPDEADLRKRCKELSTALNFPAERVEKDLSLF 177
BLAST of DY305444 vs. ExPASy Swiss-Prot
Match: THF1_PROMT (Protein thf1 OS=Prochlorococcus marinus (strain NATL2A) GN=thf1 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.322e-11 Identity = 48/190 (25.26%), Postives = 89/190 (46.84%), Query Frame = 1 Query: 7 VPPTVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEQYRIDAQKLEEWARGQTASSLVEFPSKEGEVEGILNDIAERASGKGNFSYSRFFAVGLFRLLELANATEPTVLEKLCAVLNVNKRS-------VDRDLDVYRN 555 V T++++K +F K + IP+IY + EL+V+ HL+ +++ ++ D +F+ G V+ + GY E +F A +P + +++L A+ T L F SK ND KG YSR A+G+++L+ + E L +N +S V++D+ +Y++ Sbjct: 3 VRATISDSKSDFHKEFPYVIPAIYRKLADELLVELHLLSHQKNFKKDSIFSTGLKEVFSKFTSGYKPSEHATKLFDAICNCNGFNPTEINNSSEQLVSNAKSFTKEDLNSFLSKTN------ND------NKGYDYYSRINAIGIYKLVSEMPLFKEVKEEDLNKEINDISKSLGYQYSRVEKDISMYKS 180 The following BLAST results are available for this feature:
BLAST of DY305444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY305444 ID=DY305444; Name=DY305444; organism=Citrus sinensis; type=EST; length=1249bpback to top |