EY702524
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702524 vs. ExPASy Swiss-Prot
Match: RS4E_HYPBU (30S ribosomal protein S4e OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rps4e PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.408e-33 Identity = 90/251 (35.86%), Postives = 135/251 (53.78%), Query Frame = 2 Query: 62 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDTTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT--IRYPDPL-------IKANDTIKLDLEENKITDFIKFDVGNIVMVTWGRNRGRVGIIQNRGKHKGRFENIHIPDALGHEFATRLGDGFPIR-KGSKPGVALPK 781 MAR G ++HLK L APK W + + G F KPS GPH +PL++++R+ L YA T RE ++ + H +DG+VR + YP GFMDV+ I T E +R+L F LH + EEA+FKL ++ + G ++ +DGR IR DP K T+K+ + E ++ + +VG++V++ GRN GRVG I + R + I DA G + T L F I +P ++LP+ Sbjct: 1 MARMGGRRHLKTLAAPKFWPVRQRAGIFTVKPSPGPHPIERSIPLLILVRDVLGYAKTAREARKLIAEGHFKIDGRVRRNYKYPVGFMDVIEIVDTGEFYRVLPYPTRFFTLHPISKEEAQFKLGRIEDKSTVKGGHIQLHLHDGRNVLIRVSDPTNPVEAKPYKTLGTVKISIPEQQLLGYAPLEVGSLVIIFGGRNVGRVGRIVSIQPGMRRRGIVTIEDARGEKIQTSLEYVFVIAPPNEEPWISLPE 251
BLAST of EY702524 vs. ExPASy Swiss-Prot
Match: RS4E_PYRKO (30S ribosomal protein S4e OS=Pyrococcus kodakaraensis GN=rps4e PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 4.108e-33 Identity = 89/242 (36.78%), Postives = 135/242 (55.79%), Query Frame = 2 Query: 68 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDTTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR----TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTWGRNRGRVG-IIQNRGKHKGRFENIHIPDALGHEFATRLGDGFPIRKGSKPGVALP 778 +G K+HLKRL AP W + + +A +PS GPH + +PLI ++R+ L YA T RE IL + +LVDG+VR D +P G MDVVSIP+T E++R+L + G+ LH + +EEAK K ++ + + + +N +DG ++ D K + T+ + + E +I + F+VG V VT G+N R G I++ R G + + I D G F T F I K KP ++LP Sbjct: 4 KGPKRHLKRLAAPTSWYIHRKAYKWAVRPSPGPHSMKTSIPLIYIVRDYLGYAKTAREARKILNEGKILVDGRVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPISEEEAKLKPFRINNKRMVKGAKVQLNLHDGSNHLVSLAEKD-AYKTSYTVIMQVPERQIVKVLPFEVGAYVFVTQGKNVARKGKIVEVRQFPMGWPDVVTIEDENGELFDTLKEYAFVIGK-DKPEISLP 243
BLAST of EY702524 vs. ExPASy Swiss-Prot
Match: RS4E_METTH (30S ribosomal protein S4e OS=Methanobacterium thermoautotrophicum GN=rps4e PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 7.007e-33 Identity = 75/191 (39.27%), Postives = 112/191 (58.64%), Query Frame = 2 Query: 77 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDTTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTWGRNRGRVGIIQ 649 +KHLKR +P HW + + KPS GPH LPL++++R+ LK A RE I+ VLVDG+ R + +P GFMDVVSIP+T + +R+L D +GR LH + +E A FKLCK+ + + G +N +DGR D + D +KL + E +I + I F+ ++ +VT GR+ G +G I+ Sbjct: 7 RKHLKRFKSPVHWPIHPKEYKWTVKPSPGPHAIENSLPLMIIVRDILKVADNAREARKIINSGEVLVDGRPRKNYKFPVGFMDVVSIPRTGDVYRVLPDERGRLVLHPIDEENAGFKLCKIVNKTTIKGGRTQLNLHDGRNY-LSDDEFRVGDVVKLSIPEQEILERIPFEKDSLGLVTGGRHTGEIGKIK 196
BLAST of EY702524 vs. ExPASy Swiss-Prot
Match: RS4E_METST (30S ribosomal protein S4e OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps4e PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.561e-32 Identity = 79/192 (41.15%), Postives = 110/192 (57.29%), Query Frame = 2 Query: 71 GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDTTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTWGRNRGRVGII 646 G +KHLKR APK W + K + K S+GPH E +PL++VLR+ L A RE IL VLVDG R + +P GFMDV+SIPK N+ FR+L D KGR L + ++++ FKL K+ + G +N GR I D K D + L++ E KI+D IKF+ G + ++T G++ VG I Sbjct: 5 GSRKHLKRFKAPKMWPIHKKEEVWTTKTSAGPHALEESIPLVMVLRDILGLAANSREAKIILNNSDVLVDGIPRKNHRFPVGFMDVISIPKINKTFRVLQDYKGRLVLKEIEEKDSTFKLVKILGKTTIKGGKTQLNLEGGRNI-IADDDYKTGDVLLLNIPEQKISDSIKFEEGALGLITGGKHISEVGKI 195
BLAST of EY702524 vs. ExPASy Swiss-Prot
Match: RS4E_AERPE (30S ribosomal protein S4e OS=Aeropyrum pernix GN=rps4e PE=3 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 3.477e-32 Identity = 90/250 (36.00%), Postives = 136/250 (54.40%), Query Frame = 2 Query: 62 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDTTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI--RYPDP------LIKANDTIKLDLEENKITDFIKFDVGNIVMVTWGRNRGRVGIIQNRGKHKGRFEN-IHIPDALGHEFATRLGDGFPIRKGSKPGVALPK 781 MAR G ++ LK L AP+ W + + +A KP GPH + + LPL+L++RN L YA T RE ++ + H VDG VR D +P GFMDV+ + T E FR+L F+LH + +EE K ++ + + G +N +DGR I R DP + + DT+ + + +I IKF G I ++ GRN GRVG++++ K GR + + DA G+ F T L F I +P ++LP+ Sbjct: 1 MARMGGQRRLKALAAPRFWPILRKEYKWAVKPRPGPHPAEKSLPLLLIVRNVLGYAQTAREARKLISEGHFRVDGVVRKDYKFPVGFMDVIEVVDTGEKFRMLPYPVKFFKLHPIPEEEGDLKPVRIENKTTVKGGHVQLNLHDGRNILVRVKDPRNPVEDVYRTMDTLLITVPGQEIKGHIKFGEGAIAIIVGGRNVGRVGVVKSVQKGWGRKRTLVTLEDASGNLFQTSLDYVFVIGL-DRPVISLPE 249
BLAST of EY702524 vs. ExPASy Swiss-Prot
Match: RS4E_PYRHO (30S ribosomal protein S4e OS=Pyrococcus horikoshii GN=rps4e PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.541e-32 Identity = 86/243 (35.39%), Postives = 135/243 (55.56%), Query Frame = 2 Query: 68 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDTTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKAND-----TIKLDLEENKITDFIKFDVGNIVMVTWGRNRGRVG-IIQNRGKHKGRFENIHIPDALGHEFATRLGDGFPIRKGSKPGVALP 778 +G K+HLKRL AP W +++ +A +P GPH R +PL+ ++R+ L YA T RE IL + LVDGKVR D +P G MDVVSIP+T E++R+L + G+ LH + +EEA K ++R+ + + +N +DG + PL + ++ T+ + + E +I + + F+ G V VT G+N R G I++ + G + + I D G F T F + K KP ++LP Sbjct: 4 KGPKRHLKRLAAPSSWYIERKAYKWAVRPRPGPHNMRTSIPLLYIVRDYLGYAKTAREARKILNEGKFLVDGKVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLVLHPISEEEANIKPLRIRNKRMVKGAKVQLNFHDG--TNHLIPLTEKDNYFTSYTVLMKVPEREIMEVLPFEKGAYVFVTQGKNVARKGRIVEIKKFPMGWPDVVTIEDEEGELFDTLKEYAFVVGK-DKPKISLP 243
BLAST of EY702524 vs. ExPASy Swiss-Prot
Match: RS4E_METJA (30S ribosomal protein S4e OS=Methanocaldococcus jannaschii GN=rps4e PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.747e-32 Identity = 81/208 (38.94%), Postives = 117/208 (56.25%), Query Frame = 2 Query: 68 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDTTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR--TIRYPDP------LIKANDTIKLDLEENKITDFIKFDVGNIVMVTWGRNRG---RVGIIQNRG 658 +G K+HLKRL AP W L + F +P G H E LPL+L++R+ LKYA RE I+ VLVDG+VR + P G MDVVS+P NEN+R+L+D KGR +L E KLCK+++ + G +N +DGR I+ DP + K DT+ + + E +I I F+VG + +T G++ G ++ I+ RG Sbjct: 4 KGPKRHLKRLAAPVRWELPRKIHKFTVRPLPGAHPMSESLPLLLIVRDILKYADNAREAKKIIKMGKVLVDGRVRKEEKLPVGLMDVVSLPDANENYRVLFDRKGRIKLKP--TENPDVKLCKIKNKTVIKGGHIQLNLHDGRNIVIKVSDPTKAEEDVYKTGDTLLISIPEQEIKAHIPFEVGKLAYITGGKHVGDFAKIVEIERRG 209
BLAST of EY702524 vs. ExPASy Swiss-Prot
Match: RS4E_PYRAB (30S ribosomal protein S4e OS=Pyrococcus abyssi GN=rps4e PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 5.021e-31 Identity = 84/243 (34.57%), Postives = 135/243 (55.56%), Query Frame = 2 Query: 68 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDTTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKAND-----TIKLDLEENKITDFIKFDVGNIVMVTWGRNRGRVG-IIQNRGKHKGRFENIHIPDALGHEFATRLGDGFPIRKGSKPGVALP 778 +G K+HLKRL AP W +++ +A +P GPH R +PL+ ++R+ L YA T RE IL + LVDG+VR D +P G MDVVSIP+T E++R+L + G+ LH + +EEA K ++R+ + + +N +DG + PL + ++ T+ + + E +I + + F+ G V VT G+N R G I++ + G + + I D G F T F + + KP ++LP Sbjct: 4 KGPKRHLKRLAAPTSWYIERKAYKWAVRPRPGPHNMRTSIPLLYIVRDYLGYAKTAREARKILNEGKFLVDGRVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPISEEEANIKPLRIRNKRMVKGAKIQLNFHDG--TNHLIPLSEKDNYFTSYTVLMKVPEREILEVLPFEKGAYVFVTQGKNVARKGRIVEIKKFPMGWPDVVTIEDEEGELFDTLKEYAFVVGR-DKPRISLP 243
BLAST of EY702524 vs. ExPASy Swiss-Prot
Match: RS4E_META3 (30S ribosomal protein S4e OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps4e PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 8.565e-31 Identity = 71/196 (36.22%), Postives = 108/196 (55.10%), Query Frame = 2 Query: 68 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDTTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR--------TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTWGRNRG 631 +G +KHLKRL APK+W + + + +PS+GPH LPL+LVLR+ L YA RE ++ VLVDG R D YP G MDV+S+P NE+F ++ D KGR +L+ ++D KLCK+ + + G +N +DGR + + + K D + L + E I ++F G + +T G++ G Sbjct: 4 KGPRKHLKRLPAPKNWQISRKTNKYTTRPSAGPHAMGSSLPLLLVLRDLLGYADNAREAKKVIKMGKVLVDGVKRKDHRYPTGLMDVISLPDANESFLVVLDEKGRIKLNKIKDNTK--KLCKIENKTVIKGGHIQLNLHDGRNQIVKLADATKAEEDIYKTGDCVILSIPEQSIVGHVQFGEGKLAYITGGKHVG 197
BLAST of EY702524 vs. ExPASy Swiss-Prot
Match: RS4E_DESK1 (30S ribosomal protein S4e OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rps4e PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 5.552e-30 Identity = 84/246 (34.15%), Postives = 131/246 (53.25%), Query Frame = 2 Query: 71 GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDTTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT--IRYPDPLIKANDT------IKLDLEENKITDFIKFDVGNIVMVTWGRNRGRVGIIQNRGKHKGRFENI-HIPDALGHEFATRLGDGFPIRKGSKPGVALPK 781 G +HLK +NAP++W + + + K S GPH LPL++++R+ L YA T +E ++ + + +DG+VR D +P G MDV+ I N+ +R++ L + EEA FKLC++ + + G +N +DGR IR DP DT +KL + +I D++ G I +V+ GRN GRVG I + K R+ +I + D G++F T L FPI KP + LP+ Sbjct: 5 GGSRHLKAINAPRYWPILRKEYRWVVKSSPGPHPISRSLPLLILVRDMLGYAKTGKEARRLIAEGYFKIDGRVRRDYKFPVGVMDVIEIVGVNKYYRVIPVPTKVLGLIEISREEASFKLCRIENKTTVKNGHIQLNLHDGRNVLIRVNDPRNPVEDTYDTLGVLKLSIPVQQILDYVPLKEGVIAIVSGGRNVGRVGKIVSIHKGMRRYRSIVTLEDKQGNKFQTSLDYIFPIGV-EKPLIKLPE 249 The following BLAST results are available for this feature:
BLAST of EY702524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 103
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY702524 ID=EY702524; Name=EY702524; organism=Citrus sinensis; type=EST; length=904bpback to top |