EY702515
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS_ANASP (Ribulose bisphosphate carboxylase small chain OS=Anabaena sp. (strain PCC 7120) GN=cbbS PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.885e-18 Identity = 42/111 (37.84%), Postives = 65/111 (58.56%), Query Frame = 1 Query: 43 KKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKP 375 +++ETLSYLPPL+D + K++ Y++ G+IP +EF YWT+WKLP++G + +VL EV + +YP ++R++GFDN Q +SFI KP Sbjct: 8 RRYETLSYLPPLTDVQIEKQVQYILSQGYIPAVEFN------------EVSEPTELYWTLWKLPLFGAKTSREVLAEVQSCRSQYPGHYIRVVGFDNIKQCQILSFIVHKP 106
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS2_THIFE (Ribulose bisphosphate carboxylase small chain 2 OS=Thiobacillus ferrooxidans GN=cbbS2 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.498e-17 Identity = 43/106 (40.57%), Postives = 58/106 (54.72%), Query Frame = 1 Query: 46 KFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFI 363 KFETLSYLP L+ + + +++ Y++ GW P +E H P G YW MWKLPM+G TD +LKE K PH+ VRI+G+DN Q S + Sbjct: 18 KFETLSYLPALTADEIRQQVAYIVSKGWNPAVE------------HTEPENAFGNYWYMWKLPMFGETDVDTILKEAERCHKRNPHNHVRIVGYDNFKQSQGTSLV 111
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS_CYAPA (Ribulose bisphosphate carboxylase small chain OS=Cyanophora paradoxa GN=rbcS PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.472e-16 Identity = 36/111 (32.43%), Postives = 65/111 (58.56%), Query Frame = 1 Query: 43 KKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKP 375 +KFET SYLPPL+D+ + +++ Y + G+ P +EF G + WT+WKLP++G +VL E+ ++++P++++R++ FD+ VQ + F+ KP Sbjct: 7 RKFETFSYLPPLNDQQIARQLQYALSNGYSPAIEFSFT------------GKAEDLVWTLWKLPLFGAQSPEEVLSEIQACKQQFPNAYIRVVAFDSIRQVQTLMFLVYKP 105
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS1_CHRVI (Ribulose bisphosphate carboxylase small chain 1 OS=Chromatium vinosum GN=cbbS1 PE=1 SV=4) HSP 1 Score: 83.9593 bits (206), Expect = 1.227e-15 Identity = 40/99 (40.40%), Postives = 55/99 (55.56%), Query Frame = 1 Query: 43 KKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGA 339 +KFET SYLP + + + K++ Y++ GW P +E H P YW MWKLPM+G TD +LKE K +P++ VR+IGFDN A Sbjct: 17 RKFETFSYLPRMDADRIRKQVEYIVSKGWNPAIE------------HTEPENAFDHYWYMWKLPMFGETDIDTILKEAEACHKAHPNNHVRLIGFDNYA 103
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS_ALVHS (Ribulose bisphosphate carboxylase small chain OS=Alvinoconcha hessleri symbiotic bacterium GN=cbbS PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.093e-15 Identity = 42/112 (37.50%), Postives = 57/112 (50.89%), Query Frame = 1 Query: 43 KKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKPP 378 +KFET SYLP L E + K++ Y++ GW P +E H P YW MWKLPM+G TD +L E K +P VR+IG+DN A Q + + + P Sbjct: 17 RKFETFSYLPELGVEKIRKQVEYIVSKGWNPAVE------------HTEPENAFDHYWYMWKLPMFGETDVDAILAEAEACHKAHPSHHVRLIGYDNYAQSQGTAMVIFRGP 116
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS_THIDA (Ribulose bisphosphate carboxylase small chain OS=Thiobacillus denitrificans (strain ATCC 25259) GN=cbbS PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.954e-15 Identity = 39/102 (38.24%), Postives = 56/102 (54.90%), Query Frame = 1 Query: 43 KKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQ 348 +KFET SYLP ++ + K++ YL+ GW P +E H P + YW MWKLPM+G TD ++L E K P++ VR++G+DN A Q Sbjct: 17 RKFETFSYLPAMNAADIRKQVEYLVSKGWNPAIE------------HTEPEHLMDSYWYMWKLPMFGETDIDRILGEAEACHKANPNNHVRLVGYDNFAQSQ 106
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS_PSEHY (Ribulose bisphosphate carboxylase small chain OS=Pseudomonas hydrogenothermophila GN=cbbS PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.954e-15 Identity = 38/111 (34.23%), Postives = 60/111 (54.05%), Query Frame = 1 Query: 43 KKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKP 375 K+FET SYLP +S E + K+I Y++ GW P +E H P YW MWKLPM+G TD +++ E+ ++ P+ +++IG+DN Q + + +P Sbjct: 24 KRFETFSYLPQMSAEEIRKQIEYIVSKGWNPAIE------------HCEPENAILHYWYMWKLPMFGETDVDKIIAEIEACKRSNPNHLIKLIGYDNIRQTQGTAMLVYRP 122
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS1_HYDMR (Ribulose bisphosphate carboxylase small chain 1 OS=Hydrogenovibrio marinus GN=cbbS-1 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.022e-14 Identity = 41/102 (40.20%), Postives = 55/102 (53.92%), Query Frame = 1 Query: 43 KKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQ 348 +K ET SYLP ++ + + ++ Y+I GW P +E H P YW MWKLPM+G TDA VL EV K P++ VR+IG+DN A Q Sbjct: 17 RKAETFSYLPKMTTDQIKAQVEYIISKGWNPAIE------------HSEPENAFSYYWYMWKLPMFGDTDANVVLAEVDACIKANPNNHVRLIGYDNYAQSQ 106
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS2_CHRVI (Ribulose bisphosphate carboxylase small chain 2 OS=Chromatium vinosum GN=cbbS2 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.947e-14 Identity = 39/110 (35.45%), Postives = 60/110 (54.55%), Query Frame = 1 Query: 46 KFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKP 375 ++ET SYLPPL+ E +L++I Y++ GW LE H+ P YW MWK+P +G D +L E+ ++ YP VR++G+D A + SF+A +P Sbjct: 15 RYETFSYLPPLNREEILEQILYILDNGWNASLE------------HEHPDRAFEYYWPMWKMPFFGEQDPNVILTEIESCRRSYPDHHVRLVGYDTYAQSKGHSFLAHRP 112
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS2_HYDMR (Ribulose bisphosphate carboxylase small chain 2 OS=Hydrogenovibrio marinus GN=cbbS-2 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.794e-14 Identity = 37/103 (35.92%), Postives = 54/103 (52.43%), Query Frame = 1 Query: 52 ETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISF 360 ET S+LP + + + +I Y+I GW P LE H++P YW MWKLPM+G D VL E+ + + YP+ +R+IG+DN Q +F Sbjct: 15 ETFSFLPEFTADEIYDQIVYIINQGWTPALE------------HEAPEAASSHYWGMWKLPMFGTRDPNAVLAEIDQCRAAYPNHMIRLIGYDNYTQCQGHNF 105 The following BLAST results are available for this feature:
BLAST of EY702515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 125
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Sequences
The
following sequences are available for this feature:
EST sequence >EY702515 ID=EY702515; Name=EY702515; organism=Citrus sinensis; type=EST; length=861bpback to top |