DY257601

Overview
NameDY257601
Unique NameDY257601
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1146
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257601 vs. ExPASy Swiss-Prot
Match: SAHH_PYRKO (Adenosylhomocysteinase OS=Pyrococcus kodakaraensis GN=ahcY PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.019e-13
Identity = 47/131 (35.88%), Postives = 69/131 (52.67%), Query Frame = 3
Query:  138 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGD 530
            +++ VKD+S A  G  +I+     MP L   R +F   +PFKG +I  +LH+ ++TA L+ TL A GAEV   + N  STQD                +GE  ++Y+    KALD      P++I+DDG D
Sbjct:    5 KDYCVKDISLAPSGEKKIDWVSRFMPVLQHIRKDFEERKPFKGVRIAATLHLEMKTAFLLLTLKAAGAEVSAAASNPLSTQDDVVAALAKAGVKVYAIRGEDREQYYEFMHKALD----VKPNIIIDDGAD 131          
BLAST of DY257601 vs. ExPASy Swiss-Prot
Match: SAHH_THEAC (Adenosylhomocysteinase OS=Thermoplasma acidophilum GN=ahcY PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.774e-11
Identity = 43/125 (34.40%), Postives = 60/125 (48.00%), Query Frame = 3
Query:  177 GRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH-XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIH 548
            G L +  A   MP +   R  F   +PFKG K+  +LH+  +T +    L   GAEV+  SCN  S+ D                 KGET +EY+    + LD      PD+I+DDGGD T ++H
Sbjct:    6 GFLRLAWARDHMPVIAEIRKRFQAEKPFKGIKVAMALHVEAKTGIFALLLKEGGAEVKMASCNPLSSDDSVVQSLKEDYGMPVFARKGETSEEYYEYLHRTLD----VQPDIIIDDGGDLTKIVH 126          
BLAST of DY257601 vs. ExPASy Swiss-Prot
Match: SAHH_METAC (Adenosylhomocysteinase OS=Methanosarcina acetivorans GN=ahcY PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.622e-11
Identity = 47/141 (33.33%), Postives = 67/141 (47.52%), Query Frame = 3
Query:  177 GRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWK-GETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLP 596
            G +++E A   MP +   R +F   +P KG K+  +LH+  +TAVL+ETL A GA+V    CN  STQD                + G    EY+   +K LD      PD+ +DDG D    +H+        E+T  LP
Sbjct:   10 GNMKMEWARNHMPVIAIIREKFEKEKPLKGLKVGMALHVEAKTAVLVETLAAGGAQVAISGCNPLSTQDDVARALDTRKNISCFARYGCCTSEYYEAIDKVLDI----EPDITIDDGADLIFKLHK--------ERTDLLP 138          
BLAST of DY257601 vs. ExPASy Swiss-Prot
Match: SAHH_METMA (Adenosylhomocysteinase OS=Methanosarcina mazei GN=ahcY PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 4.731e-11
Identity = 44/126 (34.92%), Postives = 62/126 (49.21%), Query Frame = 3
Query:  177 GRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWK-GETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHE 551
            G +++E A   MP L   R +F   +P KG K+  +LH+  +TAVL+ETL A GA+V    CN  STQD                K G    EY+   ++ LD      PD+ +DDG D    +H+
Sbjct:   10 GNMKMEWARNHMPVLAIIREKFEKEKPLKGLKVGMALHVEAKTAVLVETLAAGGAQVAISGCNPLSTQDDVAAALDTRENINCFAKYGCCTGEYYEAIDRVLDI----EPDITIDDGADLIFKLHK 131          
BLAST of DY257601 vs. ExPASy Swiss-Prot
Match: SAHH_THEVO (Adenosylhomocysteinase OS=Thermoplasma volcanium GN=ahcY PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 6.179e-11
Identity = 44/125 (35.20%), Postives = 60/125 (48.00%), Query Frame = 3
Query:  177 GRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH-XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIH 548
            G L +E A   MP +   R  F   +PFKG  I  +LH+  +T +    L   GA VR  SCN  S+ D                 KGET +EY+   ++ L+      PD+I+DDGGD T L+H
Sbjct:    6 GFLRLEWARDHMPVIAEIRKRFLDEKPFKGINIAMALHVEAKTGIFSLLLKEGGANVRMASCNPLSSDDSVVESLKTDYGMPVFARKGETQEEYYENLQRTLE----KPPDIIIDDGGDLTKLVH 126          
The following BLAST results are available for this feature:
BLAST of DY257601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
SAHH_PYRKO1.019e-1335.88Adenosylhomocysteinase OS=Pyrococcus kodakaraensis... [more]
SAHH_THEAC2.774e-1134.40Adenosylhomocysteinase OS=Thermoplasma acidophilum... [more]
SAHH_METAC3.622e-1133.33Adenosylhomocysteinase OS=Methanosarcina acetivora... [more]
SAHH_METMA4.731e-1134.92Adenosylhomocysteinase OS=Methanosarcina mazei GN=... [more]
SAHH_THEVO6.179e-1135.20Adenosylhomocysteinase OS=Thermoplasma volcanium G... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK3BF08FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257601 ID=DY257601; Name=DY257601; organism=Citrus sinensis; type=EST; length=1146bp
CTCGCTTGTACAATCATTCACTTTGTTTGGTTGGTTTCCAAAGAGAGAGT
AGAGTGCCCTCTCTTCCTTCTTCCTTTTAGATCTATCAATTCTATTAATA
AGCCATGGCTTTGTCCGTCGAGAAATCCGCTAGCGGTCGTGAATTCAAGG
TGAAGGATCTGTCCCAGGCTGACTTCGGCCGCCTCGAAATCGAGTTGGCC
GAAGTCGAAATGCCGGGGCTCATGGCTTGCCGCGCCGAGTTCGGCCCTTC
ACAGCCCTTCAAAGGAGCCAAGATCACCGGTTCACTCCACATGACCATCC
AGACCGCCGTCCTCATCGAGACCCTCACCGCTCTCGGCGCCGAAGTCCGC
TGGTGCTCCTGCAACATCTTCTCAACCCAAGACCACGCGGCCGCCGCCAT
CGCACGTGACTCCGCCTCCGTCTTTGCCTGGAAGGGTGAGACCCTCCAGG
AGTACTGGTGGTGCACGGAGAAAGCCCTGGACTGGGGTCCCGGCGGCGGC
CCAGATCTCATCGTCGATGACGGTGGTGACGCCACGTTGTTGATCCACGA
GGGAGTCAAAGCTGAGGAGATCTACGAGAAGACCGGGAAGTTGCCCGACC
CGGCCTCCACCGACAACGCCGAGTTTCAGATTGTTTTGACTATCATTAGA
GATGGGTTGAAGGCCGATCCCAAGAAGTACCACAAAATGAAGGAAAGATT
AGTTGGTGTTTCCGAAGAACCACGACCGGTGTCAAGAGATTGTATCAAAT
GCAAGAAAATGGAACCCTCTTGTTCCCTGCCATCCATGTCAATGACTCTG
TCACCAAGAGCAAGTTTGATAACTTGTATGGATGCCGCCACTCGCTCCCG
AATGGTTTGATGAGAGCTACTGAAGTTATTGATGGCCGGAAAGGGTGCTG
TTGTTTGGCGGTATTGTTGAAGTTGGGCAGGGTTGGGCCTGCTTCTTTGA
AGCAAACCCCGGGCCTCCTGGAATTGGTCCCCGAAAATTGATCCAATTTT
GCGCCTTCCCAGCTTCCTTATGGAAGGGTCCTCCAAGCCCCAACCCCCTT
GAGGAAGAGCCCTCCTCCCGATCCCAAAACTTCCTTTGTTTACCCCCCCC
CACCCGGGAAACAAGGAAACTTTCTCTCCATGGGTTTTTTAACCAC
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