EY702502

Overview
NameEY702502
Unique NameEY702502
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702502 vs. ExPASy Swiss-Prot
Match: HUTH_SALG2 (Histidine ammonia-lyase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=hutH PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.625e-24
Identity = 65/188 (34.57%), Postives = 104/188 (55.32%), Query Frame = 2
Query:   23 RAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHENDPLQNP 586
            R  M++++N+L +G+SGIR  ++EA+  L+N  + P +P +G++ ASGDL PL++++  L G   ++     GE + AQ A K+AG     L  KEGLAL+NGT   +  A   LFEA  L   + +  A+  E + G     D   H  +   GQI+ A +  H+L  +S +  A+  H    +Q+P
Sbjct:   98 RLIMVLKINSLARGFSGIRLSVIEALIALVNAGVYPLIPAKGSVGASGDLAPLAHLSLTLLGEGKARW---QGEWLPAQTALKKAGLEPVALAAKEGLALLNGTQASTAFALRGLFEAQELFASAVVCGALTTEAVLGSRRPFDARIHAARGQQGQIDVARLFRHLLTDTSAI--AESHHHCHKVQDP 280          
BLAST of EY702502 vs. ExPASy Swiss-Prot
Match: HUTH_SALEP (Histidine ammonia-lyase OS=Salmonella enteritidis PT4 (strain P125109) GN=hutH PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.625e-24
Identity = 65/188 (34.57%), Postives = 104/188 (55.32%), Query Frame = 2
Query:   23 RAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHENDPLQNP 586
            R  M++++N+L +G+SGIR  ++EA+  L+N  + P +P +G++ ASGDL PL++++  L G   ++     GE + AQ A K+AG     L  KEGLAL+NGT   +  A   LFEA  L   + +  A+  E + G     D   H  +   GQI+ A +  H+L  +S +  A+  H    +Q+P
Sbjct:   98 RLIMVLKINSLARGFSGIRLSVIEALIALVNAGVYPLIPAKGSVGASGDLAPLAHLSLTLLGEGKARW---QGEWLPAQTALKKAGLEPVALAAKEGLALLNGTQASTAFALRGLFEAQELFASAVVCGALTTEAVLGSRRPFDARIHAARGQQGQIDVARLFRHLLTDTSAI--AESHHHCHKVQDP 280          
BLAST of EY702502 vs. ExPASy Swiss-Prot
Match: HUTH_SALDC (Histidine ammonia-lyase OS=Salmonella dublin (strain CT_02021853) GN=hutH PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.625e-24
Identity = 65/188 (34.57%), Postives = 104/188 (55.32%), Query Frame = 2
Query:   23 RAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHENDPLQNP 586
            R  M++++N+L +G+SGIR  ++EA+  L+N  + P +P +G++ ASGDL PL++++  L G   ++     GE + AQ A K+AG     L  KEGLAL+NGT   +  A   LFEA  L   + +  A+  E + G     D   H  +   GQI+ A +  H+L  +S +  A+  H    +Q+P
Sbjct:   98 RLIMVLKINSLARGFSGIRLSVIEALIALVNAGVYPLIPAKGSVGASGDLAPLAHLSLTLLGEGKARW---QGEWLPAQTALKKAGLEPVALAAKEGLALLNGTQASTAFALRGLFEAQELFASAVVCGALTTEAVLGSRRPFDARIHAARGQQGQIDVARLFRHLLTDTSAI--AESHHHCHKVQDP 280          
BLAST of EY702502 vs. ExPASy Swiss-Prot
Match: HUTH_SALTI (Histidine ammonia-lyase OS=Salmonella typhi GN=hutH PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.429e-24
Identity = 65/188 (34.57%), Postives = 104/188 (55.32%), Query Frame = 2
Query:   23 RAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHENDPLQNP 586
            R  M++++N+L +G+SGIR  ++EA+  L+N  + P +P +G++ ASGDL PL++++  L G   ++     GE + AQ A K+AG     L  KEGLAL+NGT   +  A   LFEA  L   + +  A+  E + G     D   H  +   GQI+ A +  H+L  +S +  A+  H    +Q+P
Sbjct:   98 RLIMVLKINSLARGFSGIRLSVIEALIALVNAGVYPLIPAKGSVGASGDLAPLAHLSLTLLGEGKARW---QGEWLPAQAALKKAGLEPVALAAKEGLALLNGTQASTAFALRGLFEAQELFASAVVCGALTTEAVLGSCRPFDARIHAARGQQGQIDVARLFRHLLTDTSAI--AESHHHCHKVQDP 280          
BLAST of EY702502 vs. ExPASy Swiss-Prot
Match: HUTH_SHESH (Histidine ammonia-lyase OS=Shewanella sediminis (strain HAW-EB3) GN=hutH PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.478e-24
Identity = 62/177 (35.03%), Postives = 99/177 (55.93%), Query Frame = 2
Query:   14 STTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVN 544
            +T R  M++++N+L +G+SGIR E++  +  L+N  + PC+P +G++ ASGDL PL+++   L G          G+I+ A+E  + AG    EL  KEGLAL+NGT   + LA   LF A +L   S ++ A+  E   G     D   H  +   GQI++AA+   +L   S ++
Sbjct:   95 ATVRLMMVLKINSLSRGFSGIRLEVINFLIALVNAEVYPCVPEKGSVGASGDLAPLAHMCLPLLGEGEMSY---KGQILSAKEGLEIAGLKPIELAAKEGLALLNGTQASTALALEGLFNAEDLFAASSVIGAMSVEAAMGSRSPFDSRIHAARGQKGQIDSAALFRLLLGDESEIS 268          
BLAST of EY702502 vs. ExPASy Swiss-Prot
Match: HUTH_SALCH (Histidine ammonia-lyase OS=Salmonella choleraesuis GN=hutH PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.478e-24
Identity = 65/188 (34.57%), Postives = 104/188 (55.32%), Query Frame = 2
Query:   23 RAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHENDPLQNP 586
            R  M++++N+L +G SGIR  ++EA+  L+N  + P +P +G++ ASGDL PL++++ +L G   ++     GE + AQ A K+AG     L  KEGLAL+NGT   +  A   LFEA  L   + +  A+  E + G     D   H  +   GQI+ A +  H+L  +S +  A+  H    +Q+P
Sbjct:   98 RLIMVLKINSLARGCSGIRLSVIEALIALVNAGVYPLIPAKGSVGASGDLAPLAHLSLMLLGEGKARW---QGEWLPAQTALKKAGLEPVALAAKEGLALLNGTQASTAFALRGLFEAQELFASAVVCGALTTEAVLGSRRPFDARIHAARGQQGQIDVARLFRHLLTDTSAI--AESHHHCHKVQDP 280          
BLAST of EY702502 vs. ExPASy Swiss-Prot
Match: HUTH_SHEON (Histidine ammonia-lyase OS=Shewanella oneidensis GN=hutH PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.849e-24
Identity = 65/192 (33.85%), Postives = 106/192 (55.21%), Query Frame = 2
Query:   14 STTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHEN-DPLQNP 586
            +T R  M++++N+L +G+SGIR E++  +  L+N  + PC+P +G++ ASGDL PL+++   L G          G+II A E  + AG    +L  KEGLAL+NGT   + LA   LF A +L   S ++ A+  E   G     D   H  +   GQI++A +  ++L   S ++ +   H N + +Q+P
Sbjct:   98 ATVRLMMVLKINSLSRGFSGIRLEVINFLISLVNAEVYPCVPEKGSVGASGDLAPLAHMCLPLLGEGEMSY---QGQIISAAEGLEIAGLKPIDLAAKEGLALLNGTQASTALALEGLFHAEDLFAASSVIGAMSVEAAMGSRSPFDPRIHAARGQKGQIDSAMVFRYLLGEESEISLS---HANCEKVQDP 283          
BLAST of EY702502 vs. ExPASy Swiss-Prot
Match: HUTH_PSYWF (Histidine ammonia-lyase OS=Psychrobacter sp. (strain PRwf-1) GN=hutH PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.849e-24
Identity = 64/188 (34.04%), Postives = 105/188 (55.85%), Query Frame = 2
Query:   23 RAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHENDPLQNP 586
            R  M+++V +L QG+SG+R ++++ +  L+NH+I P +P +G++ ASGDL PLS++   L G+        NG+ + A++A  QAG     L  KEGLAL+NGT V + L     F A +L   + ++ A+  +  +G     D   H+L+ H GQI+ A     ++ GS     A     +D +Q+P
Sbjct:  101 RLIMVMKVASLAQGFSGVRRKVIDGLIGLINHDIIPHIPAKGSVGASGDLAPLSHMTLTLLGQGTCYI---NGQEMSAKDALAQAGLEPVTLAAKEGLALINGTQVSTALTLRGYFLARDLVSTATVVGALSVDAARGSDSPFDARIHELRGHHGQIQVAKAHRRLIAGSEI--RASHTENDDRVQDP 283          
BLAST of EY702502 vs. ExPASy Swiss-Prot
Match: HUTH_CHRVO (Histidine ammonia-lyase OS=Chromobacterium violaceum GN=hutH PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.849e-24
Identity = 64/185 (34.59%), Postives = 101/185 (54.59%), Query Frame = 2
Query:   14 STTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHEN 568
            ST R  M +++N+L +G+SGIR +++EA+  L N  I P +P +G++ ASGDL PLS+++ +L G   +   G     +    A + AG     L PKEGLAL+NGT   +  A   LF A +L + + +  ++  E   G     D   H+++ H GQI+AA +   +L  S      ++ HEN
Sbjct:   96 STVRLVMALKINSLARGFSGIRRQVIEALVTLFNRQIYPVIPQKGSVGASGDLAPLSHMSAVLIGEGEAFVDGVR---VPGSVAMRSAGLEPITLAPKEGLALLNGTQASTAFALEGLFAAEDLYVSATVAGSLSVEAALGSRTPFDARIHEVRGHQGQIDAARLYRDLLAHSQ----IEQSHEN 273          
BLAST of EY702502 vs. ExPASy Swiss-Prot
Match: HUTH_PSEFS (Histidine ammonia-lyase OS=Pseudomonas fluorescens (strain SBW25) GN=hutH PE=3 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 9.976e-24
Identity = 69/194 (35.57%), Postives = 111/194 (57.22%), Query Frame = 2
Query:    8 SASTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHEN-DPLQNP 586
            S +  R  M+++VN+L +G+SGIR ++++A+  L+N  + P +PL+G++ ASGDL PL++++ +L G   ++     GE ++A EA K AG     L  KEGLAL+NGT V +  A   LFE  +L   +     +  E + G     D   H  +   GQI++AA    +L  SS V+ +   H+N D +Q+P
Sbjct:   95 SDALVRLVMVLKVNSLSRGFSGIRRQVIDALIALINAEVYPHIPLKGSVGASGDLAPLAHMSLVLLGEGKARY---KGEWLEATEALKVAGLTPLTLAAKEGLALLNGTQVSTAYALRGLFEGEDLFAGALACGGLTVEAVLGSRSPFDARIHAARGQRGQIDSAAAYRDLLGESSQVSQS---HQNCDKVQDP 282          
The following BLAST results are available for this feature:
BLAST of EY702502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
HUTH_SALG22.625e-2434.57Histidine ammonia-lyase OS=Salmonella gallinarum (... [more]
HUTH_SALEP2.625e-2434.57Histidine ammonia-lyase OS=Salmonella enteritidis ... [more]
HUTH_SALDC2.625e-2434.57Histidine ammonia-lyase OS=Salmonella dublin (stra... [more]
HUTH_SALTI3.429e-2434.57Histidine ammonia-lyase OS=Salmonella typhi GN=hut... [more]
HUTH_SHESH4.478e-2435.03Histidine ammonia-lyase OS=Shewanella sediminis (s... [more]
HUTH_SALCH4.478e-2434.57Histidine ammonia-lyase OS=Salmonella choleraesuis... [more]
HUTH_SHEON5.849e-2433.85Histidine ammonia-lyase OS=Shewanella oneidensis G... [more]
HUTH_PSYWF5.849e-2434.04Histidine ammonia-lyase OS=Psychrobacter sp. (stra... [more]
HUTH_CHRVO5.849e-2434.59Histidine ammonia-lyase OS=Chromobacterium violace... [more]
HUTH_PSEFS9.976e-2435.57Histidine ammonia-lyase OS=Pseudomonas fluorescens... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-G03-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702502 ID=EY702502; Name=EY702502; organism=Citrus sinensis; type=EST; length=897bp
CCACGCGTCCGCGTCAACAACAAGGGCAGCCATGCTTGTGAGGGTTAACA
CTCTTCTCCAGGGCTACTCTGGCATCCGATTTGAAATCCTGGAAGCGATC
ACAAAGCTGCTCAATCACAACATCACTCCATGCCTCCCTCTTCGCGGCAC
AATCACTGCTTCAGGGGATCTGGTTCCTCTTTCCTACATTGCCGGACTGC
TCACCGGCCGGCCCAATTCTAAGGCCACCGGGCCTAATGGAGAGATCATT
GATGCCCAGGAAGCCTCTAAACAAGCGGGTTTCGGGTTCTTTGAGTTGCA
GCCTAAGGAGGGTCTTGCTCTTGTCAATGGCACTGCTGTTGGTTCTGGCC
TGGCTTCTATGGTTCTGTTTGAGGCTAACAACCTTGCTCTGTTATCAGAA
ATTTTGTCAGCTATTTTTGCTGAAGTCATGCAAGGCAAACCTGAGTTCAC
TGATCACTTGACACACAAATTGAAGCACCATCCTGGCCAAATTGAGGCTG
CTGCTATAATGGAACATATCCTCGATGGCAGCTCTTATGTTAACGCGGCT
AAGAAGTTGCATGAGAATGATCCTCTGCAGAACCCGAACAGGATCGTTAT
GCCCTGAGAACTTCACCACGATGGGCTCGGCCTCAGATCGAAGTGATCGG
GGTGCACCAAGTCTATTGACGGGAGATCACTCGGTGAATGACATCCCCTG
ATCGACGTTTCAGGAACAAGGCCTACATGGTGGCAATTTCAGGGGACCCC
ATTTGTTGCCCCATGGACATACCCGTTTGGTATTGCCGCAAAGGGAAACT
CCGGTTTGCCCATTTTCCGAACTGGCAACAATTTTAAACAAGGATTGCGG
CAATCCTCCTGGGGGAAGGAACCACCCTGAATAAGGTTCCAGGGGCC
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