EY702502

Overview
NameEY702502
Unique NameEY702502
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702502 vs. ExPASy Swiss-Prot
Match: HUTH_TREDE (Histidine ammonia-lyase OS=Treponema denticola GN=hutH PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.593e-21
Identity = 62/188 (32.98%), Postives = 106/188 (56.38%), Query Frame = 2
Query:   23 RAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHENDPLQNP 586
            RA ML+R+NT   G+SG+   + + +  +LN  + P +P +G++ ASGDL  L++IA ++ G   +      G++++ + A  +AG     L  K+GL ++NGT V SG+ ++ L +A  L   + + +++  E  +G     D   HK + H GQI+ AA +  +L GSS +N      END +Q+P
Sbjct:  100 RAIMLLRLNTHASGFSGVTPSVPDILVDMLNKGVIPYVPEKGSLGASGDLANLAHIALVMIGEGKAYY---EGKLMEGKAALAKAGLKPVVLSGKDGLGIINGTPVMSGIGALALHDAEQLLKAANMGASLVFEAFRGITAALDPRIHKSRPHKGQIDTAAFILKMLKGSSSINT----REND-VQDP 279          
BLAST of EY702502 vs. ExPASy Swiss-Prot
Match: HUTH_SILPO (Histidine ammonia-lyase OS=Silicibacter pomeroyi GN=hutH PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.593e-21
Identity = 58/170 (34.12%), Postives = 98/170 (57.65%), Query Frame = 2
Query:   23 RAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGS 532
            R  M++++ +L +G SG+R+E++  + ++L  ++TP +P++G++ ASGDL PL+++  ++ G   ++     G+ +   EA  +AG     L PKEGLA +NGT   +  A   LF A   A  S + +A+  + + G         H L+ H GQI+AAA M  +LDGS
Sbjct:   98 RLMMVLKLLSLGRGASGVRWELITLLQEMLARDVTPVIPVQGSVGASGDLAPLAHMTAVIIGAGEAEY---QGQRLPGAEALARAGLTPIALGPKEGLAFINGTQFSTAFALAGLFGAWRAATSSLVTAALSTDAIMGSTAPLQPEIHALRGHRGQIDAAARMRALLDGS 264          
BLAST of EY702502 vs. ExPASy Swiss-Prot
Match: HUTH_ACICJ (Histidine ammonia-lyase OS=Acidiphilium cryptum (strain JF-5) GN=hutH PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.593e-21
Identity = 63/174 (36.21%), Postives = 96/174 (55.17%), Query Frame = 2
Query:   11 ASTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGS 532
            A   R  + +++ +L +G SG+R+E +EA+  LL+H+I P +P +G++ ASGDL PL+++   L G    +  G  G   DA  A  +AG     L PKEGLAL+NGT V + +A   LF A  L   + +  A+  +  +G     D   H L+ H GQ+  AA +  +L GS
Sbjct:   90 APIVRMVIALKLASLARGASGVRWETIEALQGLLDHDILPVIPAQGSVGASGDLAPLAHMTCALLGI--GEVLGAAGRE-DAAAALGRAGMAPLVLGPKEGLALLNGTQVSTAIALTGLFRAERLCRAALLTGALTTDAARGSDAPFDPRIHALRGHAGQMAVAAALRTLLAGS 260          
BLAST of EY702502 vs. ExPASy Swiss-Prot
Match: HUTH_PSEPU (Histidine ammonia-lyase OS=Pseudomonas putida GN=hutH PE=1 SV=3)

HSP 1 Score: 103.219 bits (256), Expect = 2.080e-21
Identity = 64/189 (33.86%), Postives = 106/189 (56.08%), Query Frame = 2
Query:   23 RAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHEN-DPLQNP 586
            R  M++++N+L +G+SGIR ++++A+  L+N  + P +PL+G++ ASGDL PL++++ +L G   ++     G+ + A EA   AG     L  KEGLAL+NGT   +  A   LF A +L   +     +  E + G     D   H+ +   GQI+ AA    +L  SS V+ +   H+N D +Q+P
Sbjct:   98 RLIMVLKINSLSRGFSGIRRKVIDALIALVNAEVYPHIPLKGSVGASGDLAPLAHMSLVLLGEGKARY---KGQWLSATEALAVAGLEPLTLAAKEGLALLNGTQASTAYALRGLFYAEDLYAAAIACGGLSVEAVLGSRSPFDARIHEARGQRGQIDTAACFRDLLGDSSEVSLS---HKNCDKVQDP 280          
BLAST of EY702502 vs. ExPASy Swiss-Prot
Match: HUTH_MOUSE (Histidine ammonia-lyase OS=Mus musculus GN=Hal PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.080e-21
Identity = 63/185 (34.05%), Postives = 98/185 (52.97%), Query Frame = 2
Query:    8 SASTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLH 562
            S    R  + +R+N L +GYSGI  E L+ + +  N +    +P +GT+ ASGDL PLS++A  L G    K   P     DA+   +  G     L+PKEGLAL+NGT + + L    L  A+ +A  ++I++A+  EV++G  +  D   H ++ H GQIE A     +LD   + +   + H
Sbjct:  203 SPERCRMLLALRINVLAKGYSGISLETLKQVIEAFNASCLSYVPEKGTVGASGDLAPLSHLALGLIGE--GKMWSPKSGWADAKYVLEAHGLKPIVLKPKEGLALINGTQMITSLGCEALERASAIARQADIVAALTLEVLKGTTKAFDTDIHAVRPHRGQIEVAFRFRSLLDSDHHPSEIAESH 385          
BLAST of EY702502 vs. ExPASy Swiss-Prot
Match: HUTH_RAT (Histidine ammonia-lyase OS=Rattus norvegicus GN=Hal PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.717e-21
Identity = 62/185 (33.51%), Postives = 99/185 (53.51%), Query Frame = 2
Query:    8 SASTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLH 562
            S    R  + +R+N L +GYSGI  E L+ + ++ N +    +P +GT+ ASGDL PLS++A  L G    K   P     DA+   +  G     L+PKEGLAL+NGT + + L    +  A+ +A  ++I++A+  EV++G  +  D   H ++ H GQIE A     +LD   + +   + H
Sbjct:  203 SPERCRMLLALRINVLAKGYSGISLETLKQVIEVFNASCLSYVPEKGTVGASGDLAPLSHLALGLIGE--GKMWSPKSGWADAKYVLEAHGLKPIVLKPKEGLALINGTQMITSLGCEAVERASAIARQADIVAALTLEVLKGTTKAFDTDIHAVRPHRGQIEVAFRFRSLLDSDHHPSEIAESH 385          
BLAST of EY702502 vs. ExPASy Swiss-Prot
Match: HUTH_STRGR (Histidine ammonia-lyase OS=Streptomyces griseus GN=hutH PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 3.548e-21
Identity = 62/170 (36.47%), Postives = 93/170 (54.71%), Query Frame = 2
Query:   23 RAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGS 532
            RA M +R+ T+  G++G+R E+ + +  +LN  ITP +   G++  SGDL PLS+ A  L G    +A GP+G +  A E     G    EL+ KEGLAL+NGT    G+  M L +  NL   ++I +A+  E + G  +      H ++ HPGQ  +A  M  +L GS
Sbjct:   98 RALMFLRLKTVASGHTGVRPEVAQTMADVLNAGITPVVHEYGSLGCSGDLAPLSHCALTLMGE--GEAEGPDGTVRPAGELLAAHGIAPVELREKEGLALLNGTDGMLGMLVMALADLRNLYTSADITAALSLEALLGTDKVLAPELHAIRPHPGQGVSADNMSRVLAGS 265          
BLAST of EY702502 vs. ExPASy Swiss-Prot
Match: HUTH_BURPP (Histidine ammonia-lyase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=hutH PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.548e-21
Identity = 64/193 (33.16%), Postives = 105/193 (54.40%), Query Frame = 2
Query:    8 SASTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHENDPLQNP 586
            S    R  + +++++L +G+SGIR E++EA+  L N ++ P +P++G++ ASGDL PL++++  L G     A    GE + A E     G     LQ KEGLAL+NGT   + LA   +F   +L   + +  A+  +   G  +  D   H+L+ H GQI+AA     +L GS  +N +    + D +Q+P
Sbjct:   91 SRPVVRLLIALKLSSLGRGHSGIRREVMEALITLYNADVLPVIPVKGSVGASGDLAPLAHMSATLLGVGEVFA---KGERMPATEGLALVGLKPLTLQAKEGLALLNGTQASTALALYNMFAIEDLYRTALVSGALSVDAAMGSVKPFDARIHELRGHQGQIDAAGAYRSLLQGSG-INVSHA--DCDKVQDP 277          
BLAST of EY702502 vs. ExPASy Swiss-Prot
Match: HUTH_BOVIN (Histidine ammonia-lyase OS=Bos taurus GN=HAL PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.634e-21
Identity = 61/185 (32.97%), Postives = 98/185 (52.97%), Query Frame = 2
Query:    8 SASTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLH 562
            S    R  + +R+N L +GYSGI    L+ + ++ N +  P +P +GT+ ASGDL PLS++A  L G    K   P     DA+      G     L+PKEGLAL+NGT + + L    +  A+ +A  ++I++A+  EV++G  +  D   H ++ H GQ+E A     +LD   + +   + H
Sbjct:  203 SPERCRMLLALRINVLAKGYSGISLGTLKQVIEVFNASCLPYVPEKGTVGASGDLAPLSHLALGLIGE--GKMWSPKSGWADAKYVLAAHGLKPIVLKPKEGLALINGTQMITSLGCEAVERASAIARQADIVAALTLEVLKGTTKAFDTDIHAVRPHRGQVEVAFRFRSLLDSDHHPSEIAESH 385          
BLAST of EY702502 vs. ExPASy Swiss-Prot
Match: HUTH_BACSU (Histidine ammonia-lyase OS=Bacillus subtilis GN=hutH PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.634e-21
Identity = 62/184 (33.70%), Postives = 98/184 (53.26%), Query Frame = 2
Query:   20 TRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHEND 571
            +RA +L+R N LL+G+SG+R E++E +   LN  + P +P +G++ ASGDL PLS++A  L G+         GE + A    K+AG     L  KEGLAL+NGT   + +  +   EA  LA  +E ++++  E +QG  +  D   H  + +  QI+ A  +   L  S    +  +L   D
Sbjct:   95 SRAMLLLRANALLKGFSGVRAELIEQLLAFLNKRVHPVIPQQGSLGASGDLAPLSHLALALIGQGE---VFFEGERMPAMTGLKKAGIQPVTLTSKEGLALINGTQAMTAMGVVAYIEAEKLAYQTERIASLTIEGLQGIIDAFDEDIHLARGYQEQIDVAERIRFYLSDSGLTTSQGELRVQD 275          
The following BLAST results are available for this feature:
BLAST of EY702502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
HUTH_TREDE1.593e-2132.98Histidine ammonia-lyase OS=Treponema denticola GN=... [more]
HUTH_SILPO1.593e-2134.12Histidine ammonia-lyase OS=Silicibacter pomeroyi G... [more]
HUTH_ACICJ1.593e-2136.21Histidine ammonia-lyase OS=Acidiphilium cryptum (s... [more]
HUTH_PSEPU2.080e-2133.86Histidine ammonia-lyase OS=Pseudomonas putida GN=h... [more]
HUTH_MOUSE2.080e-2134.05Histidine ammonia-lyase OS=Mus musculus GN=Hal PE=... [more]
HUTH_RAT2.717e-2133.51Histidine ammonia-lyase OS=Rattus norvegicus GN=Ha... [more]
HUTH_STRGR3.548e-2136.47Histidine ammonia-lyase OS=Streptomyces griseus GN... [more]
HUTH_BURPP3.548e-2133.16Histidine ammonia-lyase OS=Burkholderia phytofirma... [more]
HUTH_BOVIN4.634e-2132.97Histidine ammonia-lyase OS=Bos taurus GN=HAL PE=2 ... [more]
HUTH_BACSU4.634e-2133.70Histidine ammonia-lyase OS=Bacillus subtilis GN=hu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-G03-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702502 ID=EY702502; Name=EY702502; organism=Citrus sinensis; type=EST; length=897bp
CCACGCGTCCGCGTCAACAACAAGGGCAGCCATGCTTGTGAGGGTTAACA
CTCTTCTCCAGGGCTACTCTGGCATCCGATTTGAAATCCTGGAAGCGATC
ACAAAGCTGCTCAATCACAACATCACTCCATGCCTCCCTCTTCGCGGCAC
AATCACTGCTTCAGGGGATCTGGTTCCTCTTTCCTACATTGCCGGACTGC
TCACCGGCCGGCCCAATTCTAAGGCCACCGGGCCTAATGGAGAGATCATT
GATGCCCAGGAAGCCTCTAAACAAGCGGGTTTCGGGTTCTTTGAGTTGCA
GCCTAAGGAGGGTCTTGCTCTTGTCAATGGCACTGCTGTTGGTTCTGGCC
TGGCTTCTATGGTTCTGTTTGAGGCTAACAACCTTGCTCTGTTATCAGAA
ATTTTGTCAGCTATTTTTGCTGAAGTCATGCAAGGCAAACCTGAGTTCAC
TGATCACTTGACACACAAATTGAAGCACCATCCTGGCCAAATTGAGGCTG
CTGCTATAATGGAACATATCCTCGATGGCAGCTCTTATGTTAACGCGGCT
AAGAAGTTGCATGAGAATGATCCTCTGCAGAACCCGAACAGGATCGTTAT
GCCCTGAGAACTTCACCACGATGGGCTCGGCCTCAGATCGAAGTGATCGG
GGTGCACCAAGTCTATTGACGGGAGATCACTCGGTGAATGACATCCCCTG
ATCGACGTTTCAGGAACAAGGCCTACATGGTGGCAATTTCAGGGGACCCC
ATTTGTTGCCCCATGGACATACCCGTTTGGTATTGCCGCAAAGGGAAACT
CCGGTTTGCCCATTTTCCGAACTGGCAACAATTTTAAACAAGGATTGCGG
CAATCCTCCTGGGGGAAGGAACCACCCTGAATAAGGTTCCAGGGGCC
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