EY702502

Overview
NameEY702502
Unique NameEY702502
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702502 vs. ExPASy Swiss-Prot
Match: HUTH_VIBFM (Histidine ammonia-lyase OS=Vibrio fischeri (strain MJ11) GN=hutH PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.010e-24
Identity = 64/191 (33.51%), Postives = 110/191 (57.59%), Query Frame = 2
Query:   14 STTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHENDPLQNP 586
            +T R  +++++N+L +GYSGIR  +++A+ +L+N  + PC+P +G++ ASGDL PL++++ +L G   ++      +II  +EA   AG     L PKEGLAL+NGT   +  A   LF A +L   + +  A+  E   G  +  D   H+++ H  Q++AA    H+L  SS +  + +  E   +Q+P
Sbjct:   95 ATVRLMIILKINSLSRGYSGIRPLVIDALIQLVNSEVYPCIPKKGSVGASGDLAPLAHMSTVLLGEGEARY---QDKIISGKEALDIAGLTPITLAPKEGLALLNGTQASTAFALEGLFAAEDLYASATVCGAMSVEAALGSRKPFDPRIHRVRGHRSQMDAALAYRHLLAQSSEIGLSHQCCER--VQDP 280          
BLAST of EY702502 vs. ExPASy Swiss-Prot
Match: HUTH_PSEAE (Histidine ammonia-lyase OS=Pseudomonas aeruginosa GN=hutH PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.010e-24
Identity = 69/188 (36.70%), Postives = 106/188 (56.38%), Query Frame = 2
Query:   23 RAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHENDPLQNP 586
            R  ML++VN+L +G+SGIR ++++A+  L+N  + P +PL+G++ ASGDL PL++++ +L G   ++     GE + A EA   AG     L  KEGLAL+NGT V +  A   LFEA +L   + +   +  E M G     D   H  +   GQI+ AA    +L  SS V  A+   + D +Q+P
Sbjct:   97 RLVMLLKVNSLARGFSGIRRKVIDALIALINAEVYPHIPLKGSVGASGDLAPLAHMSLVLIGESRAR---HRGEWLPAAEALAVAGLEPLTLAAKEGLALLNGTQVSTAYALRGLFEAEDLFAAATVCGGLSVEAMLGSRAPFDARIHAARGQRGQIDVAAAYRDLLTASSEV--ARSHEKCDKVQDP 279          
BLAST of EY702502 vs. ExPASy Swiss-Prot
Match: HUTH_PSEAB (Histidine ammonia-lyase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=hutH PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.010e-24
Identity = 69/188 (36.70%), Postives = 106/188 (56.38%), Query Frame = 2
Query:   23 RAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHENDPLQNP 586
            R  ML++VN+L +G+SGIR ++++A+  L+N  + P +PL+G++ ASGDL PL++++ +L G   ++     GE + A EA   AG     L  KEGLAL+NGT V +  A   LFEA +L   + +   +  E M G     D   H  +   GQI+ AA    +L  SS V  A+   + D +Q+P
Sbjct:   97 RLVMLLKVNSLARGFSGIRRKVIDALIALINAEVYPHIPLKGSVGASGDLAPLAHMSLVLIGESRAR---HRGEWLPAAEALAVAGLEPLTLAAKEGLALLNGTQVSTAYALRGLFEAEDLFAAATVCGGLSVEAMLGSRAPFDARIHAARGQRGQIDVAAAYRDLLTASSEV--ARSHEKCDKVQDP 279          
BLAST of EY702502 vs. ExPASy Swiss-Prot
Match: HUTH_PSEA8 (Histidine ammonia-lyase OS=Pseudomonas aeruginosa (strain LESB58) GN=hutH PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.010e-24
Identity = 69/188 (36.70%), Postives = 106/188 (56.38%), Query Frame = 2
Query:   23 RAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHENDPLQNP 586
            R  ML++VN+L +G+SGIR ++++A+  L+N  + P +PL+G++ ASGDL PL++++ +L G   ++     GE + A EA   AG     L  KEGLAL+NGT V +  A   LFEA +L   + +   +  E M G     D   H  +   GQI+ AA    +L  SS V  A+   + D +Q+P
Sbjct:   97 RLVMLLKVNSLARGFSGIRRKVIDALIALINAEVYPHIPLKGSVGASGDLAPLAHMSLVLIGESRAR---HRGEWLPAAEALAVAGLEPLTLAAKEGLALLNGTQVSTAYALRGLFEAEDLFAAATVCGGLSVEAMLGSRAPFDARIHAARGQRGQIDVAAAYRDLLTASSEV--ARSHEKCDKVQDP 279          
BLAST of EY702502 vs. ExPASy Swiss-Prot
Match: HUTH_SALTY (Histidine ammonia-lyase OS=Salmonella typhimurium GN=hutH PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.625e-24
Identity = 65/188 (34.57%), Postives = 104/188 (55.32%), Query Frame = 2
Query:   23 RAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHENDPLQNP 586
            R  M++++N+L +G+SGIR  ++EA+  L+N  + P +P +G++ ASGDL PL++++  L G   ++     GE + AQ A K+AG     L  KEGLAL+NGT   +  A   LFEA  L   + +  A+  E + G     D   H  +   GQI+ A +  H+L  +S +  A+  H    +Q+P
Sbjct:   98 RLIMVLKINSLARGFSGIRLSVIEALIALVNAGVYPLIPAKGSVGASGDLAPLAHLSLTLLGEGKARW---QGEWLPAQTALKKAGLEPVALAAKEGLALLNGTQASTAFALRGLFEAQELFASAVVCGALTTEAVLGSRRPFDARIHAARGQQGQIDVARLFRHLLTDTSAI--AESHHHCHKVQDP 280          
BLAST of EY702502 vs. ExPASy Swiss-Prot
Match: HUTH_SALSV (Histidine ammonia-lyase OS=Salmonella schwarzengrund (strain CVM19633) GN=hutH PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.625e-24
Identity = 65/188 (34.57%), Postives = 104/188 (55.32%), Query Frame = 2
Query:   23 RAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHENDPLQNP 586
            R  M++++N+L +G+SGIR  ++EA+  L+N  + P +P +G++ ASGDL PL++++  L G   ++     GE + AQ A K+AG     L  KEGLAL+NGT   +  A   LFEA  L   + +  A+  E + G     D   H  +   GQI+ A +  H+L  +S +  A+  H    +Q+P
Sbjct:   98 RLIMVLKINSLARGFSGIRLSVIEALIALVNAGVYPLIPAKGSVGASGDLAPLAHLSLTLLGEGKARW---QGEWLPAQTALKKAGLEPVALAAKEGLALLNGTQASTAFALRGLFEAQELFASAVVCGALTTEAVLGSRRPFDARIHAARGQQGQIDVARLFRHLLTDTSAI--AESHHHCHKVQDP 280          
BLAST of EY702502 vs. ExPASy Swiss-Prot
Match: HUTH_SALPC (Histidine ammonia-lyase OS=Salmonella paratyphi C (strain RKS4594) GN=hutH PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.625e-24
Identity = 65/188 (34.57%), Postives = 104/188 (55.32%), Query Frame = 2
Query:   23 RAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHENDPLQNP 586
            R  M++++N+L +G+SGIR  ++EA+  L+N  + P +P +G++ ASGDL PL++++  L G   ++     GE + AQ A K+AG     L  KEGLAL+NGT   +  A   LFEA  L   + +  A+  E + G     D   H  +   GQI+ A +  H+L  +S +  A+  H    +Q+P
Sbjct:   98 RLIMVLKINSLARGFSGIRLSVIEALIALVNAGVYPLIPAKGSVGASGDLAPLAHLSLTLLGEGKARW---QGEWLPAQTALKKAGLEPVALAAKEGLALLNGTQASTAFALRGLFEAQELFASAVVCGALTTEAVLGSRRPFDARIHAARGQQGQIDVARLFRHLLTDTSAI--AESHHHCHKVQDP 280          
BLAST of EY702502 vs. ExPASy Swiss-Prot
Match: HUTH_SALPB (Histidine ammonia-lyase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=hutH PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.625e-24
Identity = 65/188 (34.57%), Postives = 104/188 (55.32%), Query Frame = 2
Query:   23 RAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHENDPLQNP 586
            R  M++++N+L +G+SGIR  ++EA+  L+N  + P +P +G++ ASGDL PL++++  L G   ++     GE + AQ A K+AG     L  KEGLAL+NGT   +  A   LFEA  L   + +  A+  E + G     D   H  +   GQI+ A +  H+L  +S +  A+  H    +Q+P
Sbjct:   98 RLIMVLKINSLARGFSGIRLSVIEALIALVNAGVYPLIPAKGSVGASGDLAPLAHLSLTLLGEGKARW---QGEWLPAQTALKKAGLEPVALAAKEGLALLNGTQASTAFALRGLFEAQELFASAVVCGALTTEAVLGSRRPFDARIHAARGQQGQIDVARLFRHLLTDTSAI--AESHHHCHKVQDP 280          
BLAST of EY702502 vs. ExPASy Swiss-Prot
Match: HUTH_SALNS (Histidine ammonia-lyase OS=Salmonella newport (strain SL254) GN=hutH PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.625e-24
Identity = 65/188 (34.57%), Postives = 104/188 (55.32%), Query Frame = 2
Query:   23 RAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHENDPLQNP 586
            R  M++++N+L +G+SGIR  ++EA+  L+N  + P +P +G++ ASGDL PL++++  L G   ++     GE + AQ A K+AG     L  KEGLAL+NGT   +  A   LFEA  L   + +  A+  E + G     D   H  +   GQI+ A +  H+L  +S +  A+  H    +Q+P
Sbjct:   98 RLIMVLKINSLARGFSGIRLSVIEALIALVNAGVYPLIPAKGSVGASGDLAPLAHLSLTLLGEGKARW---QGEWLPAQTALKKAGLEPVALAAKEGLALLNGTQASTAFALRGLFEAQELFASAVVCGALTTEAVLGSRRPFDARIHAARGQQGQIDVARLFRHLLTDTSAI--AESHHHCHKVQDP 280          
BLAST of EY702502 vs. ExPASy Swiss-Prot
Match: HUTH_SALHS (Histidine ammonia-lyase OS=Salmonella heidelberg (strain SL476) GN=hutH PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.625e-24
Identity = 65/188 (34.57%), Postives = 104/188 (55.32%), Query Frame = 2
Query:   23 RAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHENDPLQNP 586
            R  M++++N+L +G+SGIR  ++EA+  L+N  + P +P +G++ ASGDL PL++++  L G   ++     GE + AQ A K+AG     L  KEGLAL+NGT   +  A   LFEA  L   + +  A+  E + G     D   H  +   GQI+ A +  H+L  +S +  A+  H    +Q+P
Sbjct:   98 RLIMVLKINSLARGFSGIRLSVIEALIALVNAGVYPLIPAKGSVGASGDLAPLAHLSLTLLGEGKARW---QGEWLPAQTALKKAGLEPVALAAKEGLALLNGTQASTAFALRGLFEAQELFASAVVCGALTTEAVLGSRRPFDARIHAARGQQGQIDVARLFRHLLTDTSAI--AESHHHCHKVQDP 280          
The following BLAST results are available for this feature:
BLAST of EY702502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
HUTH_VIBFM2.010e-2433.51Histidine ammonia-lyase OS=Vibrio fischeri (strain... [more]
HUTH_PSEAE2.010e-2436.70Histidine ammonia-lyase OS=Pseudomonas aeruginosa ... [more]
HUTH_PSEAB2.010e-2436.70Histidine ammonia-lyase OS=Pseudomonas aeruginosa ... [more]
HUTH_PSEA82.010e-2436.70Histidine ammonia-lyase OS=Pseudomonas aeruginosa ... [more]
HUTH_SALTY2.625e-2434.57Histidine ammonia-lyase OS=Salmonella typhimurium ... [more]
HUTH_SALSV2.625e-2434.57Histidine ammonia-lyase OS=Salmonella schwarzengru... [more]
HUTH_SALPC2.625e-2434.57Histidine ammonia-lyase OS=Salmonella paratyphi C ... [more]
HUTH_SALPB2.625e-2434.57Histidine ammonia-lyase OS=Salmonella paratyphi B ... [more]
HUTH_SALNS2.625e-2434.57Histidine ammonia-lyase OS=Salmonella newport (str... [more]
HUTH_SALHS2.625e-2434.57Histidine ammonia-lyase OS=Salmonella heidelberg (... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-G03-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702502 ID=EY702502; Name=EY702502; organism=Citrus sinensis; type=EST; length=897bp
CCACGCGTCCGCGTCAACAACAAGGGCAGCCATGCTTGTGAGGGTTAACA
CTCTTCTCCAGGGCTACTCTGGCATCCGATTTGAAATCCTGGAAGCGATC
ACAAAGCTGCTCAATCACAACATCACTCCATGCCTCCCTCTTCGCGGCAC
AATCACTGCTTCAGGGGATCTGGTTCCTCTTTCCTACATTGCCGGACTGC
TCACCGGCCGGCCCAATTCTAAGGCCACCGGGCCTAATGGAGAGATCATT
GATGCCCAGGAAGCCTCTAAACAAGCGGGTTTCGGGTTCTTTGAGTTGCA
GCCTAAGGAGGGTCTTGCTCTTGTCAATGGCACTGCTGTTGGTTCTGGCC
TGGCTTCTATGGTTCTGTTTGAGGCTAACAACCTTGCTCTGTTATCAGAA
ATTTTGTCAGCTATTTTTGCTGAAGTCATGCAAGGCAAACCTGAGTTCAC
TGATCACTTGACACACAAATTGAAGCACCATCCTGGCCAAATTGAGGCTG
CTGCTATAATGGAACATATCCTCGATGGCAGCTCTTATGTTAACGCGGCT
AAGAAGTTGCATGAGAATGATCCTCTGCAGAACCCGAACAGGATCGTTAT
GCCCTGAGAACTTCACCACGATGGGCTCGGCCTCAGATCGAAGTGATCGG
GGTGCACCAAGTCTATTGACGGGAGATCACTCGGTGAATGACATCCCCTG
ATCGACGTTTCAGGAACAAGGCCTACATGGTGGCAATTTCAGGGGACCCC
ATTTGTTGCCCCATGGACATACCCGTTTGGTATTGCCGCAAAGGGAAACT
CCGGTTTGCCCATTTTCCGAACTGGCAACAATTTTAAACAAGGATTGCGG
CAATCCTCCTGGGGGAAGGAACCACCCTGAATAAGGTTCCAGGGGCC
back to top