EY702501 | Citrus Genome Database

Overview


Name	EY702501
Unique Name	EY702501
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	954

Libraries


Library Name	Type
Sweet orange fruit, development stadium (2 of 6)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY702501 vs. ExPASy Swiss-Prot
Match: CHSY_RAPSA (Chalcone synthase OS=Raphanus sativus GN=CHS PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 4.523e-51
Identity = 111/212 (52.36%), Postives = 123/212 (58.02%), Query Frame = 1

Query:  145 DYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYFTEEILKENPNMCAYMAPSLDARQDIVVVEVAKLGKEAATRAIKEWGPPKSKITXXXXXXXXXXXXGPGPTTSSPN*SGLRPSGRRFVMYQPGWFRXXXXXXXXXXXXXXETTRGPRASFV---VRPETRGGPFPGALPKLLLYSPGGAGLLFRGWGAAALDTGGPNLARSGERP 771
            +YPDYYFRIT SEHMT+LKEKFKRMCDKS I+KR+M+ TEE LKENPNMCAYMAPSLDARQDIVVVEV KLGKEAA +AIKEWG PKSKIT             PG         GLRPS +R +MYQ G F               E  RG R   V   +   T  GP    L  L+       G      GAAAL  G      +GE+P
Sbjct:   39 EYPDYYFRITNSEHMTDLKEKFKRMCDKSTIRKRHMHLTEEFLKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHVVFCTTSGVDM-PGADYQLTKLLGLRPSVKRLMMYQQGCF--AGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLV-------GQALFSDGAAALIVGSDPDVSAGEKP 240

HSP 2 Score: 40.817 bits (94), Expect = 4.523e-51
Identity = 18/28 (64.29%), Postives = 23/28 (82.14%), Query Frame = 2

Query:   44 ATVQEIRNAQRADGPGTVLAIGTATPAH 127
            +++ EIR AQRADGP  +LAIGTA PA+
Sbjct:    6 SSLDEIRKAQRADGPAGILAIGTANPAN 33

[Close]

BLAST of EY702501 vs. ExPASy Swiss-Prot
Match: CHS2_SECCE (Chalcone synthase 2 OS=Secale cereale GN=CHS2 PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 4.523e-51
Identity = 109/212 (51.42%), Postives = 124/212 (58.49%), Query Frame = 1

Query:  145 DYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYFTEEILKENPNMCAYMAPSLDARQDIVVVEVAKLGKEAATRAIKEWGPPKSKITXXXXXXXXXXXXGPGPTTSSPN*SGLRPSGRRFVMYQPGWFRXXXXXXXXXXXXXXETTRGPRASFV---VRPETRGGPFPGALPKLLLYSPGGAGLLFRGWGAAALDTGGPNLARSGERP 771
            DYPDYYF+ITKS+HM +LKEKFKRMCDKS I+KRYM+ TEEIL++NPNMCAYMAPSLDARQDIVVVEV KLGK AA +AIKEWG P+SKIT             PG         GLRPS +R +MYQ G F               E  RG R   V   +   T  GP    L  L+       G    G GAAA+  G  +   S ERP
Sbjct:   38 DYPDYYFKITKSDHMADLKEKFKRMCDKSQIRKRYMHLTEEILQDNPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPRSKITHLVFCTTSGVDM-PGADYQLTKMLGLRPSVKRLMMYQQGCF--AGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPHESHLDSLV-------GQALFGDGAAAVIIGA-DPDESIERP 238

HSP 2 Score: 46.9802 bits (110), Expect = 4.523e-51
Identity = 21/27 (77.78%), Postives = 25/27 (92.59%), Query Frame = 2

Query:   47 TVQEIRNAQRADGPGTVLAIGTATPAH 127
            TV+E+R AQRA+GP TVLAIGTATPA+
Sbjct:    6 TVEEVRKAQRAEGPATVLAIGTATPAN 32

[Close]

BLAST of EY702501 vs. ExPASy Swiss-Prot
Match: CHS7_SOYBN (Chalcone synthase 7 OS=Glycine max GN=CHS7 PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 4.523e-51
Identity = 92/139 (66.19%), Postives = 99/139 (71.22%), Query Frame = 1

Query:  124 PQGAGGGDYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYFTEEILKENPNMCAYMAPSLDARQDIVVVEVAKLGKEAATRAIKEWGPPKSKITXXXXXXXXXXXXGPGPTTSSPN*SGLRPSGRRFVMYQPGWF 540
            P       YPDYYFRIT S+HMTELKEKF+RMCDKSMIK RYMY  EEILKENPNMCAYMAPSLDARQD+VVVEV KLGKEAA +AIKEWG PKSKIT             PG         GLRP  +R++MYQ G F
Sbjct:   28 PNRVDQSTYPDYYFRITNSDHMTELKEKFQRMCDKSMIKTRYMYLNEEILKENPNMCAYMAPSLDARQDMVVVEVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDM-PGADYQLTKQLGLRPYVKRYMMYQQGCF 165

HSP 2 Score: 44.2838 bits (103), Expect = 4.523e-51
Identity = 20/30 (66.67%), Postives = 24/30 (80.00%), Query Frame = 2

Query:   41 MATVQEIRNAQRADGPGTVLAIGTATPAHR 130
            M +V EIR AQRA+GP T+LAIGTA P +R
Sbjct:    1 MVSVAEIRQAQRAEGPATILAIGTANPPNR 30

[Close]

BLAST of EY702501 vs. ExPASy Swiss-Prot
Match: CHSY_VIGUN (Chalcone synthase OS=Vigna unguiculata GN=CHS PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 4.524e-51
Identity = 91/131 (69.47%), Postives = 100/131 (76.34%), Query Frame = 1

Query:  148 YPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYFTEEILKENPNMCAYMAPSLDARQDIVVVEVAKLGKEAATRAIKEWGPPKSKITXXXXXXXXXXXXGPGPTTSSPN*SGLRPSGRRFVMYQPGWF 540
            YPDYYFRIT SEHMT+LKEKF+RMCDKSMIKKRYM+ TEEILKENP+MCAYMAPSLDARQDIVVVEV +LGKEAA +AIKEWG PKSKIT             PG         GLRP  +R++MYQ G F
Sbjct:   36 YPDYYFRITNSEHMTDLKEKFQRMCDKSMIKKRYMHVTEEILKENPSMCAYMAPSLDARQDIVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDM-PGADYQLTKLLGLRPYVKRYMMYQQGCF 165

HSP 2 Score: 44.669 bits (104), Expect = 4.524e-51
Identity = 20/27 (74.07%), Postives = 23/27 (85.19%), Query Frame = 2

Query:   41 MATVQEIRNAQRADGPGTVLAIGTATP 121
            M +V EIR AQRA+GP T+LAIGTATP
Sbjct:    1 MVSVSEIRQAQRAEGPATILAIGTATP 27

[Close]

BLAST of EY702501 vs. ExPASy Swiss-Prot
Match: CHS2_MAIZE (Chalcone synthase C2 OS=Zea mays GN=C2 PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 7.684e-51
Identity = 106/201 (52.74%), Postives = 118/201 (58.71%), Query Frame = 1

Query:  145 DYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYFTEEILKENPNMCAYMAPSLDARQDIVVVEVAKLGKEAATRAIKEWGPPKSKITXXXXXXXXXXXXGPGPTTSSPN*SGLRPSGRRFVMYQPGWFRXXXXXXXXXXXXXXETTRGPRASFV---VRPETRGGPFPGALPKLLLYSPGGAGLLFRGWGAAALDTG 738
            DYPDYYFRITKSEH+T+LKEKFKRMCDKSMI+KRYM+ TEE L ENP+MCAYMAPSLDARQD+VVVEV KLGK AA +AIKEWG PKS+IT             PG         GLRPS  R +MYQ G F               E  RG R   V   +   T  GP    L  L+       G    G GAAA+  G
Sbjct:   39 DYPDYYFRITKSEHLTDLKEKFKRMCDKSMIRKRYMHLTEEFLAENPSMCAYMAPSLDARQDVVVVEVPKLGKAAAQKAIKEWGQPKSRITHLVFCTTSGVDM-PGADYQLTKALGLRPSVNRLMMYQQGCF--AGGTVLRVAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSLV-------GQALFGDGAAAVVVG 229

HSP 2 Score: 45.8246 bits (107), Expect = 7.684e-51
Identity = 21/27 (77.78%), Postives = 24/27 (88.89%), Query Frame = 2

Query:   47 TVQEIRNAQRADGPGTVLAIGTATPAH 127
            TV+E+R AQRA GP TVLAIGTATPA+
Sbjct:    7 TVEEVRKAQRATGPATVLAIGTATPAN 33

[Close]

BLAST of EY702501 vs. ExPASy Swiss-Prot
Match: CHS7_PICMA (Chalcone synthase 7 OS=Picea mariana GN=CSF7 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.002e-50
Identity = 112/205 (54.63%), Postives = 121/205 (59.02%), Query Frame = 1

Query:  124 PQGAGGGDYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYFTEEILKENPNMCAYMAPSLDARQDIVVVEVAKLGKEAATRAIKEWGPPKSKITXXXXXXXXXXXXGPGPTTSSPN*SGLRPSGRRFVMYQPGWFRXXXXXXXXXXXXXXETTRGPRASFVVRPETRGGPFPGALPKLLLYSPGGAGLLFRGWGAAALDTG 738
            P       YPDYYF+IT SEHMTELKEKF+RMCDKS IKKRYMY T+EILKENPN+C YMAPSLDARQD+VVVEV +LGKEAAT+AIKEWG PKSKIT             PG         GLRPS +R +MYQ G F               E  RG R   VV  E     F G     L    G A  LF G GAAAL  G
Sbjct:   33 PNAVDQSTYPDYYFKITNSEHMTELKEKFQRMCDKSAIKKRYMYLTDEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAATKAIKEWGQPKSKITHVIFCTTSGVDM-PGADYQLTKLLGLRPSVKRVMMYQQGCF--AGGTVLRVAKDLAENNRGARV-LVVCSEITAVTFRGPSDTHLDSMVGQA--LF-GDGAAALIVG 230

HSP 2 Score: 42.743 bits (99), Expect = 1.002e-50
Identity = 19/27 (70.37%), Postives = 22/27 (81.48%), Query Frame = 2

Query:   41 MATVQEIRNAQRADGPGTVLAIGTATP 121
            MA ++  R AQRADGP T+LAIGTATP
Sbjct:    6 MADLEAFRKAQRADGPATILAIGTATP 32

[Close]

BLAST of EY702501 vs. ExPASy Swiss-Prot
Match: CHS1_SECCE (Chalcone synthase 1 OS=Secale cereale GN=CHS1 PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 1.002e-50
Identity = 88/132 (66.67%), Postives = 99/132 (75.00%), Query Frame = 1

Query:  145 DYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYFTEEILKENPNMCAYMAPSLDARQDIVVVEVAKLGKEAATRAIKEWGPPKSKITXXXXXXXXXXXXGPGPTTSSPN*SGLRPSGRRFVMYQPGWF 540
            DYPDYYF+ITKS+HM +LKEKFKRMCDKS I+KRYM+ TEEIL++NPNMCAYMAPSLDARQDIVVVEV KLGK AA +AIKEWG P+SKIT             PG         GLRPS +R +MYQ G F
Sbjct:   38 DYPDYYFKITKSDHMADLKEKFKRMCDKSQIRKRYMHLTEEILQDNPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPRSKITHLVFCTTSGVDM-PGADYQLTKMLGLRPSVKRLMMYQQGCF 168

HSP 2 Score: 46.9802 bits (110), Expect = 1.002e-50
Identity = 21/27 (77.78%), Postives = 25/27 (92.59%), Query Frame = 2

Query:   47 TVQEIRNAQRADGPGTVLAIGTATPAH 127
            TV+E+R AQRA+GP TVLAIGTATPA+
Sbjct:    6 TVEEVRKAQRAEGPATVLAIGTATPAN 32

[Close]

BLAST of EY702501 vs. ExPASy Swiss-Prot
Match: CHSY_HYPAN (Chalcone synthase OS=Hypericum androsaemum PE=1 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 1.002e-50
Identity = 91/131 (69.47%), Postives = 96/131 (73.28%), Query Frame = 1

Query:  148 YPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYFTEEILKENPNMCAYMAPSLDARQDIVVVEVAKLGKEAATRAIKEWGPPKSKITXXXXXXXXXXXXGPGPTTSSPN*SGLRPSGRRFVMYQPGWF 540
            YPDYYFRIT SEH  ELKEKF+RMCDKS IKKRYMY  EE+LKENPNMCAYMAPSLDARQDIVVVEV KLGKEAA +AIKEWG PKSKIT             PG         GLRPS +R +MYQ G F
Sbjct:   36 YPDYYFRITNSEHKAELKEKFQRMCDKSQIKKRYMYLNEEVLKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDM-PGADYQLTKLLGLRPSVKRLMMYQQGCF 165

HSP 2 Score: 44.2838 bits (103), Expect = 1.002e-50
Identity = 19/27 (70.37%), Postives = 23/27 (85.19%), Query Frame = 2

Query:   41 MATVQEIRNAQRADGPGTVLAIGTATP 121
            M TV+E+R AQRA+GP TV+AIGTA P
Sbjct:    1 MVTVEEVRKAQRAEGPATVMAIGTAVP 27

[Close]

BLAST of EY702501 vs. ExPASy Swiss-Prot
Match: CHSB_PEA (Chalcone synthase 1B OS=Pisum sativum GN=CHS-1B PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.002e-50
Identity = 90/131 (68.70%), Postives = 99/131 (75.57%), Query Frame = 1

Query:  148 YPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYFTEEILKENPNMCAYMAPSLDARQDIVVVEVAKLGKEAATRAIKEWGPPKSKITXXXXXXXXXXXXGPGPTTSSPN*SGLRPSGRRFVMYQPGWF 540
            YPDYYFRIT SEH TELKEKF+RMCDKSMIKKRYM+ TEEILKENP++C YMAPSLDARQD+VVVEV KLGKEAAT+AIKEWG PKSKIT             PG         GLRP  +R++MYQ G F
Sbjct:   36 YPDYYFRITNSEHKTELKEKFQRMCDKSMIKKRYMHLTEEILKENPSVCEYMAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDM-PGADYQLTKLLGLRPHVKRYMMYQQGCF 165

HSP 2 Score: 45.4394 bits (106), Expect = 1.002e-50
Identity = 21/27 (77.78%), Postives = 23/27 (85.19%), Query Frame = 2

Query:   41 MATVQEIRNAQRADGPGTVLAIGTATP 121
            M TV EIR AQ+A+GP TVLAIGTATP
Sbjct:    1 MVTVDEIRQAQKAEGPATVLAIGTATP 27

[Close]

BLAST of EY702501 vs. ExPASy Swiss-Prot
Match: CHSJ_PETHY (Chalcone synthase J OS=Petunia hybrida GN=CHSJ PE=2 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 1.002e-50
Identity = 91/131 (69.47%), Postives = 97/131 (74.05%), Query Frame = 1

Query:  148 YPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYFTEEILKENPNMCAYMAPSLDARQDIVVVEVAKLGKEAATRAIKEWGPPKSKITXXXXXXXXXXXXGPGPTTSSPN*SGLRPSGRRFVMYQPGWF 540
            YPDYYFRIT SEH TELKEKF+RMCDKSMIKKRYM+ TEEILKENPN+C YMAPSLDARQDIVVVEV KLGKEAA +AIKEWG PKSKIT             PG         GLR S +R +MYQ G F
Sbjct:   36 YPDYYFRITNSEHKTELKEKFQRMCDKSMIKKRYMHLTEEILKENPNICEYMAPSLDARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDM-PGADYQLTKLLGLRSSVKRLMMYQQGCF 165

HSP 2 Score: 46.9802 bits (110), Expect = 1.002e-50
Identity = 20/29 (68.97%), Postives = 26/29 (89.66%), Query Frame = 2

Query:   41 MATVQEIRNAQRADGPGTVLAIGTATPAH 127
            M TV+EIR AQRA+GP T++AIGTATP++
Sbjct:    1 MVTVEEIRRAQRAEGPATIMAIGTATPSN 29

The following BLAST results are available for this feature:

BLAST of EY702501 vs. ExPASy Swiss-Prot

BLAST of EY702501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141


Match Name	E-value	Identity	Description
CHSY_RAPSA	4.523e-51	52.36	Chalcone synthase OS=Raphanus sativus GN=CHS PE=2 ...	[more]
CHS2_SECCE	4.523e-51	51.42	Chalcone synthase 2 OS=Secale cereale GN=CHS2 PE=2...	[more]
CHS7_SOYBN	4.523e-51	66.19	Chalcone synthase 7 OS=Glycine max GN=CHS7 PE=3 SV...	[more]
CHSY_VIGUN	4.524e-51	69.47	Chalcone synthase OS=Vigna unguiculata GN=CHS PE=2...	[more]
CHS2_MAIZE	7.684e-51	52.74	Chalcone synthase C2 OS=Zea mays GN=C2 PE=3 SV=1	[more]
CHS7_PICMA	1.002e-50	54.63	Chalcone synthase 7 OS=Picea mariana GN=CSF7 PE=2 ...	[more]
CHS1_SECCE	1.002e-50	66.67	Chalcone synthase 1 OS=Secale cereale GN=CHS1 PE=3...	[more]
CHSY_HYPAN	1.002e-50	69.47	Chalcone synthase OS=Hypericum androsaemum PE=1 SV...	[more]
CHSB_PEA	1.002e-50	68.70	Chalcone synthase 1B OS=Pisum sativum GN=CHS-1B PE...	[more]
CHSJ_PETHY	1.002e-50	69.47	Chalcone synthase J OS=Petunia hybrida GN=CHSJ PE=...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C3-701-007-G02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY702501 ID=EY702501; Name=EY702501; organism=Citrus sinensis; type=EST; length=954bp
CCACGCGTCCGAAACATATTCATTAAGGGTTCAACTTGAAATGGCAACCG
TTCAAGAGATCAGAAACGCTCAGCGTGCCGACGGCCCGGGCACCGTCCTC
GCCATCGGTACGGCCACGCCTGCCCACAGGGGGCGGGCGGGGGTGATTAT
CCCGACTATTACTTCAGGATCACAAAGAGCGAGCATATGACGGAGCTTAA
AGAGAAGTTCAAGCGCATGTGTGACAAGTCGATGATTAAGAAGCGTTACA
TGTACTTCACGGAAGAGATTTTGAAGGAAAACCCCAACATGTGCGCTTAC
ATGGCTCCATCACTCGACGCACGTCAAGACATTGTGGTGGTCGAAGTGGC
GAAGCTCGGGAAAGAAGCTGCTACAAGGGCCATCAAAGAATGGGGCCCGC
CCAAGTCTAAGATCACCCACCTCATCTTCCTGCACCACCTCCGGCGGCGA
CATGGCCCGGGGCCGACTACCAGCTCCCCAAACTGATCGGGCCTGCGCCC
TTCCGGCAGACGGTTCGTGATGTACCAACCAGGATGGTTCCGCCCGGCCG
GGCCTGCTCCTTCCCCCCGCTAAAGACTTGGCCTCGAAACCACCAGGGGC
CCTCGCGCGTCCTTCGTGGTCCGCCCGGAGACCCGGGGGGGTCCCTTTCC
GGGGGCCTTGCCGAAACTCCTCCTGTATTCCCCTGGGGGGGCCGGGCTTT
TGTTCCGGGGATGGGGCGCGGCTGCCTTGGATACTGGGGGGCCAAATCTG
GCCCGCTCGGGCGAGCGGCCCCGTGGACTTGGTTCCGGGCGCTCTTTCCC
AAACAGTCCCCCCCTGACCCTTACGGGGCCAGTGCCGCCGGCCTCGGCGC
CCACGGGGCCTTCCCTCCCCCTTGCGCCAAGACGCCCGCGCCGTGCGTCC
TCAAGATATTATACCAAAAGCCCCCGGTACGACGCGCCCCCCTCTGGGTA
CGCG