EY702501 | Citrus Genome Database

Overview


Name	EY702501
Unique Name	EY702501
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	954

Libraries


Library Name	Type
Sweet orange fruit, development stadium (2 of 6)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY702501 vs. ExPASy Swiss-Prot
Match: CHS9_MEDSA (Chalcone synthase 9 OS=Medicago sativa GN=CHS9 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 3.409e-48
Identity = 103/200 (51.50%), Postives = 117/200 (58.50%), Query Frame = 1

Query:  148 YPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYFTEEILKENPNMCAYMAPSLDARQDIVVVEVAKLGKEAATRAIKEWGPPKSKITXXXXXXXXXXXXGPGPTTSSPN*SGLRPSGRRFVMYQPGWFRXXXXXXXXXXXXXXETTRGPRASFV---VRPETRGGPFPGALPKLLLYSPGGAGLLFRGWGAAALDTG 738
            YPD+YF+IT SEH  ELKEKF+RMCDKSMIK+RYMY TEEILKENP++C YMAPSLDARQD+VVVEV +LGKEAA +AIKEWG PKSKIT             PG         GLRP  +R++MYQ G F               E  +G R   V   V   T  GP    L  L+       G    G GAAAL  G
Sbjct:   36 YPDFYFKITNSEHKVELKEKFQRMCDKSMIKRRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDM-PGADYQLTKLLGLRPYVKRYMMYQQGCF--AGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLV-------GQALFGDGAAALIVG 225

HSP 2 Score: 43.8986 bits (102), Expect = 3.409e-48
Identity = 19/29 (65.52%), Postives = 24/29 (82.76%), Query Frame = 2

Query:   41 MATVQEIRNAQRADGPGTVLAIGTATPAH 127
            M +V EIR AQRA+GP T++AIGTA PA+
Sbjct:    1 MVSVSEIRQAQRAEGPATIMAIGTANPAN 29

[Close]

BLAST of EY702501 vs. ExPASy Swiss-Prot
Match: CHS1_TRISU (Chalcone synthase 1 OS=Trifolium subterraneum GN=CHS1 PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 4.443e-48
Identity = 103/200 (51.50%), Postives = 116/200 (58.00%), Query Frame = 1

Query:  148 YPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYFTEEILKENPNMCAYMAPSLDARQDIVVVEVAKLGKEAATRAIKEWGPPKSKITXXXXXXXXXXXXGPGPTTSSPN*SGLRPSGRRFVMYQPGWFRXXXXXXXXXXXXXXETTRGPRASFV---VRPETRGGPFPGALPKLLLYSPGGAGLLFRGWGAAALDTG 738
            YPD+YF+IT SEH  ELKEKF+RMCDKSMIK RYMY TEEILKENP++C YMAPSLDARQD+VVVEV +LGKEAA +AIKEWG PKSKIT             PG         GLRP  +R++MYQ G F               E  +G R   V   V   T  GP    L  L+       G    G GAAAL  G
Sbjct:   36 YPDFYFKITNSEHKVELKEKFQRMCDKSMIKSRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDM-PGADYQLTKLLGLRPYVKRYMMYQQGCF--AGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLV-------GQALFGDGAAALIVG 225

HSP 2 Score: 44.2838 bits (103), Expect = 4.443e-48
Identity = 20/30 (66.67%), Postives = 24/30 (80.00%), Query Frame = 2

Query:   41 MATVQEIRNAQRADGPGTVLAIGTATPAHR 130
            M +V EIR AQRA+GP T+LAIGTA P +R
Sbjct:    1 MVSVAEIRKAQRAEGPATILAIGTANPPNR 30

[Close]

BLAST of EY702501 vs. ExPASy Swiss-Prot
Match: CHS3_MEDSA (Chalcone synthase 4-1 OS=Medicago sativa GN=CHS4-1 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 7.548e-48
Identity = 103/200 (51.50%), Postives = 117/200 (58.50%), Query Frame = 1

Query:  148 YPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYFTEEILKENPNMCAYMAPSLDARQDIVVVEVAKLGKEAATRAIKEWGPPKSKITXXXXXXXXXXXXGPGPTTSSPN*SGLRPSGRRFVMYQPGWFRXXXXXXXXXXXXXXETTRGPRASFV---VRPETRGGPFPGALPKLLLYSPGGAGLLFRGWGAAALDTG 738
            YPD+YF+IT SEH  ELKEKF+RMCDKSMIK+RYMY TEEILKENP++C YMAPSLDARQD+VVVEV +LGKEAA +AIKEWG PKSKIT             PG         GLRP  +R++MYQ G F               E  +G R   V   V   T  GP    L  L+       G    G GAAAL  G
Sbjct:   36 YPDFYFKITNSEHKVELKEKFQRMCDKSMIKRRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDM-PGADYQLTKLLGLRPYVKRYMMYQQGCF--AGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLV-------GQALFGDGAAALIVG 225

HSP 2 Score: 42.743 bits (99), Expect = 7.548e-48
Identity = 18/29 (62.07%), Postives = 24/29 (82.76%), Query Frame = 2

Query:   41 MATVQEIRNAQRADGPGTVLAIGTATPAH 127
            M +V EIR AQRA+GP T++AIGTA P++
Sbjct:    1 MVSVSEIRQAQRAEGPATIMAIGTANPSN 29

[Close]

BLAST of EY702501 vs. ExPASy Swiss-Prot
Match: CHS4_PEA (Chalcone synthase 4 OS=Pisum sativum GN=CHS4 PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 7.548e-48
Identity = 103/204 (50.49%), Postives = 117/204 (57.35%), Query Frame = 1

Query:  148 YPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYFTEEILKENPNMCAYMAPSLDARQDIVVVEVAKLGKEAATRAIKEWGPPKSKITXXXXXXXXXXXXGPGPTTSSPN*SGLRPSGRRFVMYQPGWFRXXXXXXXXXXXXXXETTRGPRASFV---VRPETRGGPFPGALPKLLLYSPGGAGLLFRGWGAAALDTGGPNL 750
            YPD+YFRIT SEH  ELK+KF+RMCDKSMI +RYMY TEEILKENP++C YMAPSLDARQD+VVVEV +LGKEAA +AIKEWG PKSKIT             PG         GLRP  +R++MYQ G F               E  +G R   V   V   T  GP    L  L+       G    G GAAAL  G   L
Sbjct:   36 YPDFYFRITNSEHKIELKQKFQRMCDKSMINRRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDM-PGADYQLTKLLGLRPYVKRYMMYQQGCF--AGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLV-------GQALFGDGAAALIVGSDPL 229

HSP 2 Score: 44.669 bits (104), Expect = 7.548e-48
Identity = 20/29 (68.97%), Postives = 24/29 (82.76%), Query Frame = 2

Query:   41 MATVQEIRNAQRADGPGTVLAIGTATPAH 127
            M +V EIR AQRA+GP T+LAIGTA PA+
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTANPAN 29

[Close]

BLAST of EY702501 vs. ExPASy Swiss-Prot
Match: CHS1_PEA (Chalcone synthase 1 OS=Pisum sativum GN=CHS1 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 9.837e-48
Identity = 103/200 (51.50%), Postives = 117/200 (58.50%), Query Frame = 1

Query:  148 YPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYFTEEILKENPNMCAYMAPSLDARQDIVVVEVAKLGKEAATRAIKEWGPPKSKITXXXXXXXXXXXXGPGPTTSSPN*SGLRPSGRRFVMYQPGWFRXXXXXXXXXXXXXXETTRGPRASFV---VRPETRGGPFPGALPKLLLYSPGGAGLLFRGWGAAALDTG 738
            YPD+YF+IT SEH T LKEKF+RMCDKSMIK+RYMY TEEILKENP++C YMAPSLDARQD+VVVEV +LGKEAA +AIKEWG PKSKIT             PG         GLRP  +R++MYQ G F               E  +G R   V   V   T  GP    L  L+       G    G GAAAL  G
Sbjct:   36 YPDFYFKITNSEHKTVLKEKFQRMCDKSMIKRRYMYLTEEILKENPSLCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDM-PGADYQLTKLLGLRPYVKRYMMYQQGCF--AGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLV-------GQALFGDGAAALIVG 225

HSP 2 Score: 42.743 bits (99), Expect = 9.837e-48
Identity = 19/29 (65.52%), Postives = 23/29 (79.31%), Query Frame = 2

Query:   41 MATVQEIRNAQRADGPGTVLAIGTATPAH 127
            M +V EIR  QRA+GP T+LAIGTA PA+
Sbjct:    1 MVSVSEIRKPQRAEGPATILAIGTANPAN 29

[Close]

BLAST of EY702501 vs. ExPASy Swiss-Prot
Match: CHS1_CICAR (Chalcone synthase 1 OS=Cicer arietinum GN=CHS1 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.282e-47
Identity = 101/200 (50.50%), Postives = 115/200 (57.50%), Query Frame = 1

Query:  148 YPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYFTEEILKENPNMCAYMAPSLDARQDIVVVEVAKLGKEAATRAIKEWGPPKSKITXXXXXXXXXXXXGPGPTTSSPN*SGLRPSGRRFVMYQPGWFRXXXXXXXXXXXXXXETTRGPRASFV---VRPETRGGPFPGALPKLLLYSPGGAGLLFRGWGAAALDTG 738
            YPD+YF+IT SEH  ELK+KF+RMCDKSMIK RYMY TEEILKENP++C YMAPSLD RQD+VVVEV +LGKEAA +AIKEWG PKSKIT             PG         GLRP  +R++MYQ G F               E  +G R   V   V   T  GP    L  L+       G    G GAAAL  G
Sbjct:   36 YPDFYFKITNSEHKVELKQKFQRMCDKSMIKSRYMYLTEEILKENPSVCEYMAPSLDVRQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDM-PGADYQLTKLLGLRPYVKRYMMYQQGCF--AGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLV-------GQALFGDGAAALIVG 225

HSP 2 Score: 45.4394 bits (106), Expect = 1.282e-47
Identity = 20/30 (66.67%), Postives = 25/30 (83.33%), Query Frame = 2

Query:   41 MATVQEIRNAQRADGPGTVLAIGTATPAHR 130
            M +V EIR AQRA+GP T+LAIGTA P++R
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTANPSNR 30

[Close]

BLAST of EY702501 vs. ExPASy Swiss-Prot
Match: CHS5_MEDSA (Chalcone synthase 4-2 OS=Medicago sativa GN=CHS4-2 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 4.821e-47
Identity = 102/200 (51.00%), Postives = 116/200 (58.00%), Query Frame = 1

Query:  148 YPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYFTEEILKENPNMCAYMAPSLDARQDIVVVEVAKLGKEAATRAIKEWGPPKSKITXXXXXXXXXXXXGPGPTTSSPN*SGLRPSGRRFVMYQPGWFRXXXXXXXXXXXXXXETTRGPRASFV---VRPETRGGPFPGALPKLLLYSPGGAGLLFRGWGAAALDTG 738
            YPD+YF+IT SEH TELKEKF+RMCDKSMIK+RYMY TEEILKENP++C  MAPSLDA QD+VVVEV +LGKEAA +AIKEWG PKSKIT             PG         GLRP  +R++MYQ G F               E  +G R   V   V   T  GP    L  L+       G    G GAAAL  G
Sbjct:   36 YPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTEEILKENPSVCEIMAPSLDAWQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDM-PGADYQLTKLLGLRPYVKRYMMYQQGCF--AGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLV-------GQALFGDGAAALIVG 225

HSP 2 Score: 44.2838 bits (103), Expect = 4.821e-47
Identity = 20/29 (68.97%), Postives = 23/29 (79.31%), Query Frame = 2

Query:   41 MATVQEIRNAQRADGPGTVLAIGTATPAH 127
            M +V EIRNAQRA+GP T LAIGTA P +
Sbjct:    1 MVSVSEIRNAQRAEGPATTLAIGTANPTN 29

[Close]

BLAST of EY702501 vs. ExPASy Swiss-Prot
Match: CHS1_MAIZE (Chalcone synthase WHP1 OS=Zea mays GN=WHP1 PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 3.078e-46
Identity = 85/132 (64.39%), Postives = 94/132 (71.21%), Query Frame = 1

Query:  145 DYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYFTEEILKENPNMCAYMAPSLDARQDIVVVEVAKLGKEAATRAIKEWGPPKSKITXXXXXXXXXXXXGPGPTTSSPN*SGLRPSGRRFVMYQPGWF 540
            DYPDYYFRITKS+H+T+LKEKFKRMCDKSMI+KRYM+ TEE L ENP+MCAYMAPSLDARQD+VV EV KLGK AA  AIKEWG PKS+IT             PG         GLR    R +MYQ G F
Sbjct:   39 DYPDYYFRITKSDHLTDLKEKFKRMCDKSMIRKRYMHLTEEFLSENPSMCAYMAPSLDARQDVVVTEVPKLGKAAAQEAIKEWGQPKSRITHLVFCTTSGVDM-PGADYQLTKALGLRVV-NRLMMYQQGCF 168

HSP 2 Score: 43.5134 bits (101), Expect = 3.078e-46
Identity = 20/27 (74.07%), Postives = 22/27 (81.48%), Query Frame = 2

Query:   47 TVQEIRNAQRADGPGTVLAIGTATPAH 127
            TV E+R  QRA GP TVLAIGTATPA+
Sbjct:    7 TVDEVRKGQRATGPATVLAIGTATPAN 33

[Close]

BLAST of EY702501 vs. ExPASy Swiss-Prot
Match: CHS1_MEDSA (Chalcone synthase 1 OS=Medicago sativa GN=CHS1 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 8.883e-46
Identity = 99/200 (49.50%), Postives = 113/200 (56.50%), Query Frame = 1

Query:  148 YPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYFTEEILKENPNMCAYMAPSLDARQDIVVVEVAKLGKEAATRAIKEWGPPKSKITXXXXXXXXXXXXGPGPTTSSPN*SGLRPSGRRFVMYQPGWFRXXXXXXXXXXXXXXETTRGPRASFVV---RPETRGGPFPGALPKLLLYSPGGAGLLFRGWGAAALDTG 738
            YPD+YF+IT SEH  ELKEKF+RMCDKSMIK+RYMY TEEILK+NP +C YMAPSL ARQD+ VV V +LGKEAA +AIKEWG PKSKIT             PG         GLRP  +R++MYQ G F               E  +G R   V     P T  GP    L  L+       G    G GAAAL  G
Sbjct:   36 YPDFYFKITNSEHKVELKEKFQRMCDKSMIKRRYMYLTEEILKDNPRVCEYMAPSLAARQDMAVVVVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDM-PGADYQLTKLLGLRPYVKRYMMYQQGCF--AGGTVLRLAKDLAENNKGARVLVVCSEETPVTFRGPSDTHLDSLV-------GQALFGDGAAALIVG 225

HSP 2 Score: 43.5134 bits (101), Expect = 8.883e-46
Identity = 19/29 (65.52%), Postives = 24/29 (82.76%), Query Frame = 2

Query:   41 MATVQEIRNAQRADGPGTVLAIGTATPAH 127
            M +V EIR AQRA+GP T++AIGTA PA+
Sbjct:    1 MVSVAEIRQAQRAEGPATIMAIGTANPAN 29

[Close]

BLAST of EY702501 vs. ExPASy Swiss-Prot
Match: THS2_VITVI (Stilbene synthase 2 OS=Vitis vinifera GN=GSVIVT00004047001 PE=2 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 1.966e-45
Identity = 77/132 (58.33%), Postives = 94/132 (71.21%), Query Frame = 1

Query:  145 DYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYFTEEILKENPNMCAYMAPSLDARQDIVVVEVAKLGKEAATRAIKEWGPPKSKITXXXXXXXXXXXXGPGPTTSSPN*SGLRPSGRRFVMYQPGWF 540
            DY DYYFR+TKSEHMT LK+KF R+CDKSMIKKRY++ TEE+L+E+PN+ AYMAPSL+ RQ+I+  EV KLGKEAA +A+KEWG PKSKIT             PG      N  GL PS RR ++Y  G +
Sbjct:   35 DYADYYFRVTKSEHMTALKKKFNRICDKSMIKKRYIHLTEEMLEEHPNIGAYMAPSLNIRQEIITAEVPKLGKEAALKALKEWGQPKSKITHLVFCTTSGVEM-PGADYKLANLLGLEPSVRRVMLYHQGCY 165

HSP 2 Score: 50.447 bits (119), Expect = 1.966e-45
Identity = 23/29 (79.31%), Postives = 26/29 (89.66%), Query Frame = 2

Query:   41 MATVQEIRNAQRADGPGTVLAIGTATPAH 127
            MA+V+EIRNAQRA GP T+LAIGTATP H
Sbjct:    1 MASVEEIRNAQRAKGPATILAIGTATPDH 29

The following BLAST results are available for this feature:

BLAST of EY702501 vs. ExPASy Swiss-Prot

BLAST of EY702501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141


Match Name	E-value	Identity	Description
CHS9_MEDSA	3.409e-48	51.50	Chalcone synthase 9 OS=Medicago sativa GN=CHS9 PE=...	[more]
CHS1_TRISU	4.443e-48	51.50	Chalcone synthase 1 OS=Trifolium subterraneum GN=C...	[more]
CHS3_MEDSA	7.548e-48	51.50	Chalcone synthase 4-1 OS=Medicago sativa GN=CHS4-1...	[more]
CHS4_PEA	7.548e-48	50.49	Chalcone synthase 4 OS=Pisum sativum GN=CHS4 PE=3 ...	[more]
CHS1_PEA	9.837e-48	51.50	Chalcone synthase 1 OS=Pisum sativum GN=CHS1 PE=2 ...	[more]
CHS1_CICAR	1.282e-47	50.50	Chalcone synthase 1 OS=Cicer arietinum GN=CHS1 PE=...	[more]
CHS5_MEDSA	4.821e-47	51.00	Chalcone synthase 4-2 OS=Medicago sativa GN=CHS4-2...	[more]
CHS1_MAIZE	3.078e-46	64.39	Chalcone synthase WHP1 OS=Zea mays GN=WHP1 PE=3 SV...	[more]
CHS1_MEDSA	8.883e-46	49.50	Chalcone synthase 1 OS=Medicago sativa GN=CHS1 PE=...	[more]
THS2_VITVI	1.966e-45	58.33	Stilbene synthase 2 OS=Vitis vinifera GN=GSVIVT000...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C3-701-007-G02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY702501 ID=EY702501; Name=EY702501; organism=Citrus sinensis; type=EST; length=954bp
CCACGCGTCCGAAACATATTCATTAAGGGTTCAACTTGAAATGGCAACCG
TTCAAGAGATCAGAAACGCTCAGCGTGCCGACGGCCCGGGCACCGTCCTC
GCCATCGGTACGGCCACGCCTGCCCACAGGGGGCGGGCGGGGGTGATTAT
CCCGACTATTACTTCAGGATCACAAAGAGCGAGCATATGACGGAGCTTAA
AGAGAAGTTCAAGCGCATGTGTGACAAGTCGATGATTAAGAAGCGTTACA
TGTACTTCACGGAAGAGATTTTGAAGGAAAACCCCAACATGTGCGCTTAC
ATGGCTCCATCACTCGACGCACGTCAAGACATTGTGGTGGTCGAAGTGGC
GAAGCTCGGGAAAGAAGCTGCTACAAGGGCCATCAAAGAATGGGGCCCGC
CCAAGTCTAAGATCACCCACCTCATCTTCCTGCACCACCTCCGGCGGCGA
CATGGCCCGGGGCCGACTACCAGCTCCCCAAACTGATCGGGCCTGCGCCC
TTCCGGCAGACGGTTCGTGATGTACCAACCAGGATGGTTCCGCCCGGCCG
GGCCTGCTCCTTCCCCCCGCTAAAGACTTGGCCTCGAAACCACCAGGGGC
CCTCGCGCGTCCTTCGTGGTCCGCCCGGAGACCCGGGGGGGTCCCTTTCC
GGGGGCCTTGCCGAAACTCCTCCTGTATTCCCCTGGGGGGGCCGGGCTTT
TGTTCCGGGGATGGGGCGCGGCTGCCTTGGATACTGGGGGGCCAAATCTG
GCCCGCTCGGGCGAGCGGCCCCGTGGACTTGGTTCCGGGCGCTCTTTCCC
AAACAGTCCCCCCCTGACCCTTACGGGGCCAGTGCCGCCGGCCTCGGCGC
CCACGGGGCCTTCCCTCCCCCTTGCGCCAAGACGCCCGCGCCGTGCGTCC
TCAAGATATTATACCAAAAGCCCCCGGTACGACGCGCCCCCCTCTGGGTA
CGCG