EY702497

Overview
NameEY702497
Unique NameEY702497
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length940
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702497 vs. ExPASy Swiss-Prot
Match: MX3_RAT (Interferon-induced GTP-binding protein Mx3 OS=Rattus norvegicus GN=Mx3 PE=2 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 1.198e-15
Identity = 32/76 (42.11%), Postives = 44/76 (57.89%), Query Frame = 1
Query:  688 LRIFSPNGGNLTLIDLPGPTTVAVDGPPESIVPDIENMGKPYIGKPICIILAISPGNQDLGTSNAIKSPRKVDPEG 915
            L + SP+  +LTLIDLPG T VAV   P  I   I+ +   YI K   I L + P N D+ T+ A+   ++VDP+G
Sbjct:  162 LDVSSPHVPDLTLIDLPGITRVAVGNQPSDIGRQIKRLITNYIQKQETINLVVVPSNVDIATTEALSMAQEVDPDG 237          

HSP 2 Score: 46.2098 bits (108), Expect = 1.198e-15
Identity = 43/136 (31.62%), Postives = 65/136 (47.79%), Query Frame = 3
Query:  291 QNQSTLMDNLITLVNKIQRACTALGDHGEESAVPTLWDSLPSIAXXXXXXXXXXXXLESVVGKDFLPRGSGIVTRRPLVLQLHKIQEGKEYAEFMHLPRKRFNDFAAVRKEISDETDRETGRSKAISTGSLSIKDI 698
            +N    ++NL +   +  R C  L D      V     +LP+IA            LE++ G   LPRGSGIVTR PLVL+L K+ +G+E+        K    +  +  E+SD ++ E    +AI+TG   I  +
Sbjct:   30 ENNKDSVNNLCSQYEEKVRPCIDLIDSLRALGVEQDL-ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLKLKKLNQGEEW--------KGKVTYDDIEVELSDPSEVE----EAINTGQNHIAGV 151          
BLAST of EY702497 vs. ExPASy Swiss-Prot
Match: MX_EPICO (Interferon-induced GTP-binding protein Mx OS=Epinephelus coioides GN=mx PE=2 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 1.200e-15
Identity = 33/76 (43.42%), Postives = 47/76 (61.84%), Query Frame = 1
Query:  688 LRIFSPNGGNLTLIDLPGPTTVAVDGPPESIVPDIENMGKPYIGKPICIILAISPGNQDLGTSNAIKSPRKVDPEG 915
            L I SP+  +LTLIDLPG   VAV G PE I   I+ + + +I +   I L + P N D+ T+ A+K  ++VDP+G
Sbjct:  127 LEIASPDVPDLTLIDLPGIARVAVKGQPEDIGKQIKGLIQRFITRQETISLVVVPCNVDIATTEALKMAQEVDPDG 202          

HSP 2 Score: 43.1282 bits (100), Expect = 1.200e-15
Identity = 33/98 (33.67%), Postives = 50/98 (51.02%), Query Frame = 3
Query:  405 SLPSIAXXXXXXXXXXXXLESVVGKDFLPRGSGIVTRRPLVLQLHKIQEGKE-YAEFMHLP-RKRFNDFAAVRKEISDETDRETGRSKAISTGSLSIK 692
            +LP+IA            LE++ G   LPRGSGIVTR PL L++ + +EG+E Y +  +    K   D + V  +I +  D   G    IS   +S++
Sbjct:   32 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLELKMKRKKEGEEWYGKISYRGCEKELEDPSDVENKIREAQDEMAGVGVGISDDLISLE 128          
BLAST of EY702497 vs. ExPASy Swiss-Prot
Match: MX1_RAT (Interferon-induced GTP-binding protein Mx1 OS=Rattus norvegicus GN=Mx1 PE=1 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 1.558e-15
Identity = 39/102 (38.24%), Postives = 56/102 (54.90%), Query Frame = 1
Query:  637 LIERLVVRKQSLLGPYPLRIFS---------PNGGNLTLIDLPGPTTVAVDGPPESIVPDIENMGKPYIGKPICIILAISPGNQDLGTSNAIKSPRKVDPEG 915
            L+ER + + Q+L+    L+I S         P+  +LTLIDLPG T VAV   P  I   I+ +   YI K   I L + P N D+ T+ A+K  ++VDP+G
Sbjct:  129 LVEREINKAQNLIAGEGLKISSDLISLEVSSPHVPDLTLIDLPGITRVAVGDQPADIEHKIKRLITEYIQKQETINLVVVPSNVDIATTEALKMAQEVDPQG 230          

HSP 2 Score: 41.9726 bits (97), Expect = 1.558e-15
Identity = 31/86 (36.05%), Postives = 47/86 (54.65%), Query Frame = 3
Query:  309 MDNLITLVNKIQRACTALGDHGEESAVPTLWDSLPSIAXXXXXXXXXXXXLESVVGKDFLPRGSGIVTRRPLVLQLHKIQEGKEYA 566
            +DNL +   +  R C  L D      V     +LP+IA            LE++ G   LPRGSGIVTR PLVL+L ++++G++++
Sbjct:   29 VDNLCSQYEEKVRPCIDLIDSLRALGVEQDL-ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLKLKQLKQGEKWS 112          
BLAST of EY702497 vs. ExPASy Swiss-Prot
Match: MX1_BOVIN (Interferon-induced GTP-binding protein Mx1 OS=Bos taurus GN=MX1 PE=2 SV=4)

HSP 1 Score: 59.3066 bits (142), Expect = 2.024e-15
Identity = 31/76 (40.79%), Postives = 47/76 (61.84%), Query Frame = 1
Query:  688 LRIFSPNGGNLTLIDLPGPTTVAVDGPPESIVPDIENMGKPYIGKPICIILAISPGNQDLGTSNAIKSPRKVDPEG 915
            L + SP+  +LTLIDLPG T VAV   P  I   I+++ + YI +   I L + P N D+ T+ A++  ++VDP+G
Sbjct:  153 LEVSSPHVPDLTLIDLPGITRVAVGNQPPDIEYQIKSLIRKYILRQETINLVVVPANVDIATTEALRMAQEVDPQG 228          

HSP 2 Score: 44.2838 bits (103), Expect = 2.024e-15
Identity = 35/98 (35.71%), Postives = 48/98 (48.98%), Query Frame = 3
Query:  405 SLPSIAXXXXXXXXXXXXLESVVGKDFLPRGSGIVTRRPLVLQLHKIQEGKEYAEFMHLPRKRFN--DFAAVRKEISDETDRETGRSKAISTGSLSIK 692
            +LP+IA            LE++ G   LPRGSGIVTR PLVL+L K+    E+   +    K     D + V KEIS+      G    IS   +S++
Sbjct:   58 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLRLKKLGNEDEWKGKVSFLDKEIEIPDASQVEKEISEAQIAIAGEGTGISHELISLE 154          
BLAST of EY702497 vs. ExPASy Swiss-Prot
Match: MXB_DANRE (Interferon-induced GTP-binding protein MxB OS=Danio rerio GN=mxb PE=2 SV=2)

HSP 1 Score: 58.5362 bits (140), Expect = 9.750e-15
Identity = 33/76 (43.42%), Postives = 46/76 (60.53%), Query Frame = 1
Query:  688 LRIFSPNGGNLTLIDLPGPTTVAVDGPPESIVPDIENMGKPYIGKPICIILAISPGNQDLGTSNAIKSPRKVDPEG 915
            L+I S N  +LTLIDLPG   VAV G PE+I   I+ + + +I K   I L + P N D+ T+ A++  +  DPEG
Sbjct:  131 LQITSANVPDLTLIDLPGIARVAVKGQPENIGDQIKRLIRMFITKQETINLVVVPCNVDIATTEALQMAQAEDPEG 206          

HSP 2 Score: 42.743 bits (99), Expect = 9.750e-15
Identity = 32/98 (32.65%), Postives = 51/98 (52.04%), Query Frame = 3
Query:  405 SLPSIAXXXXXXXXXXXXLESVVGKDFLPRGSGIVTRRPLVLQLHKIQEGKEYAEFMHLP--RKRFNDFAAVRKEISDETDRETGRSKAISTGSLSIK 692
            +LP+IA            LE++ G   LPRGSGIVTR PL L++ + +E +++   +      + F+D A V K+I +  D   G    IS   +S++
Sbjct:   36 ALPAIAVIGDQSSGKSSVLEALSGVP-LPRGSGIVTRCPLELKMIRSKEDEKWHGRISYQNHEEDFDDPAEVEKKIREAQDEMAGAGVGISEELISLQ 132          
BLAST of EY702497 vs. ExPASy Swiss-Prot
Match: MX2_CANFA (Interferon-induced GTP-binding protein Mx2 OS=Canis familiaris GN=MX2 PE=2 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.263e-14
Identity = 34/76 (44.74%), Postives = 44/76 (57.89%), Query Frame = 1
Query:  688 LRIFSPNGGNLTLIDLPGPTTVAVDGPPESIVPDIENMGKPYIGKPICIILAISPGNQDLGTSNAIKSPRKVDPEG 915
            L I SP   +LTLIDLPG T VAV   P+ I   I+ + K YI K   I L + P N D+ T+ A+   ++VDP G
Sbjct:  211 LEITSPEVPDLTLIDLPGITRVAVGNQPQDIGVQIKALIKNYIQKQETINLVVVPCNVDIATTEALSMAQEVDPNG 286          

HSP 2 Score: 41.5874 bits (96), Expect = 1.263e-14
Identity = 36/100 (36.00%), Postives = 49/100 (49.00%), Query Frame = 3
Query:  405 SLPSIAXXXXXXXXXXXXLESVVGKDFLPRGSGIVTRRPLVLQL----HKIQEGKEYAEFMHLPRKRFNDFAAVRKEISDETDRETGRSKAISTGSLSIK 692
            +LP+IA            LE++ G   LPRGSGIVTR PLVL+L    HK   G+       L   +F D + V KEI    +   G+   IS   +S++
Sbjct:  117 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLKLKRDPHKAWRGRISYRKTEL---QFQDPSQVEKEIRQAQNIIAGQGLGISHELISLE 212          
BLAST of EY702497 vs. ExPASy Swiss-Prot
Match: MX1_PIG (Interferon-induced GTP-binding protein Mx1 OS=Sus scrofa GN=MX1 PE=2 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 1.265e-14
Identity = 34/76 (44.74%), Postives = 47/76 (61.84%), Query Frame = 1
Query:  688 LRIFSPNGGNLTLIDLPGPTTVAVDGPPESIVPDIENMGKPYIGKPICIILAISPGNQDLGTSNAIKSPRKVDPEG 915
            L + SP+  +LTLIDLPG T VAV   P  I   I+++ K YI K   I L + P N D+ T+ A++  ++VDPEG
Sbjct:  165 LEVSSPHVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCNVDIATTEALRMAQEVDPEG 240          

HSP 2 Score: 39.2762 bits (90), Expect = 1.265e-14
Identity = 33/99 (33.33%), Postives = 50/99 (50.51%), Query Frame = 3
Query:  405 SLPSIAXXXXXXXXXXXXLESVVGKDFLPRGSGIVTRRPLVLQLHKI--QEGKEYAEFMHLPRK-RFNDFAAVRKEISDETDRETGRSKAISTGSLSIK 692
            +LP+IA            LE++ G   LPRGSGIVTR PLVL+L K+  +E +   +  +   +   +D + V KE+S       G    IS   +S++
Sbjct:   69 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLKLKKLVNEEDEWKGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHELISLE 166          
BLAST of EY702497 vs. ExPASy Swiss-Prot
Match: MX_LARCR (Interferon-induced GTP-binding protein Mx OS=Larimichthys crocea GN=mx PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 1.646e-14
Identity = 32/76 (42.11%), Postives = 46/76 (60.53%), Query Frame = 1
Query:  688 LRIFSPNGGNLTLIDLPGPTTVAVDGPPESIVPDIENMGKPYIGKPICIILAISPGNQDLGTSNAIKSPRKVDPEG 915
            L I SP+  +LTLI LPG   VAV   PE+I   I+ + + +I K   I L + P N D+ T+ A+K  ++VDP+G
Sbjct:  127 LEIASPDVPDLTLIALPGIARVAVKKQPENIGDQIKRLIQKFIKKQETINLVVVPCNMDIATTEALKMAQEVDPDG 202          

HSP 2 Score: 43.1282 bits (100), Expect = 1.646e-14
Identity = 34/105 (32.38%), Postives = 52/105 (49.52%), Query Frame = 3
Query:  405 SLPSIAXXXXXXXXXXXXLESVVGKDFLPRGSGIVTRRPLVLQLHKIQEGKE---------YAEFMHLPRKRFNDFAAVRKEISDETDRETGRSKAISTGSLSIK 692
            +LP+IA            LE++ G   LPRGSGIVTR PL L++ + +EG+E         Y E + +P       A V K+I +  D+  G    I+   +S++
Sbjct:   32 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLELKMKRKKEGEEWYGKISYQDYEEEIEVP-------ADVEKKIREAQDKMAGNGVEIADDLISLE 128          
BLAST of EY702497 vs. ExPASy Swiss-Prot
Match: MX1_PONAB (Interferon-induced GTP-binding protein Mx1 OS=Pongo abelii GN=MX1 PE=2 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 3.604e-14
Identity = 33/76 (43.42%), Postives = 44/76 (57.89%), Query Frame = 1
Query:  688 LRIFSPNGGNLTLIDLPGPTTVAVDGPPESIVPDIENMGKPYIGKPICIILAISPGNQDLGTSNAIKSPRKVDPEG 915
            L I S +  +LTLIDLPG T VAV   P  I   I+ + K YI +   I L + P N D+ T+ A+   ++VDPEG
Sbjct:  164 LEISSRDVPDLTLIDLPGITRVAVGNQPADIGYKIKTLIKKYIQRQETISLVVVPSNVDIATTEALSMAQEVDPEG 239          

HSP 2 Score: 41.5874 bits (96), Expect = 3.604e-14
Identity = 49/164 (29.88%), Postives = 72/164 (43.90%), Query Frame = 3
Query:  237 RVDSLSESHTTTTNQLSDQNQSTL----MDNLITLVNKIQRACTALGDHGEESAVPTLWDSLPSIAXXXXXXXXXXXXLESVVGKDFLPRGSGIVTRRPLVLQLHK-IQEGKEYAEFMHLPRK-RFNDFAAVRKEISDETDRETGRSKAIS----TGSLSIKDI 698
            + D  + SH    N  ++  Q  L     +NL +   +  R C  L D      V     +LP+IA            LE++ G   LPRGSGIVTR PLVL+L K + E K   +  +   +   +D + V KEI+   +   G    IS    T  +S +D+
Sbjct:   10 KADPAAASHPVLLNGDANVAQKNLGSVAENNLCSQYEEKVRPCIDLIDSLRALGVEQDL-ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLKLKKLVNEDKWRGKVSYQDYEIEISDASEVEKEINKAQNTIAGEGMGISHELITLEISSRDV 171          
BLAST of EY702497 vs. ExPASy Swiss-Prot
Match: MX1_HUMAN (Interferon-induced GTP-binding protein Mx1 OS=Homo sapiens GN=MX1 PE=1 SV=4)

HSP 1 Score: 57.7658 bits (138), Expect = 4.681e-14
Identity = 33/76 (43.42%), Postives = 44/76 (57.89%), Query Frame = 1
Query:  688 LRIFSPNGGNLTLIDLPGPTTVAVDGPPESIVPDIENMGKPYIGKPICIILAISPGNQDLGTSNAIKSPRKVDPEG 915
            L I S +  +LTLIDLPG T VAV   P  I   I+ + K YI +   I L + P N D+ T+ A+   ++VDPEG
Sbjct:  164 LEISSRDVPDLTLIDLPGITRVAVGNQPADIGYKIKTLIKKYIQRQETISLVVVPSNVDIATTEALSMAQEVDPEG 239          

HSP 2 Score: 41.2022 bits (95), Expect = 4.681e-14
Identity = 36/104 (34.62%), Postives = 52/104 (50.00%), Query Frame = 3
Query:  405 SLPSIAXXXXXXXXXXXXLESVVGKDFLPRGSGIVTRRPLVLQLHK-IQEGKEYAEFMHLPRK-RFNDFAAVRKEISDETDRETGRSKAIS----TGSLSIKDI 698
            +LP+IA            LE++ G   LPRGSGIVTR PLVL+L K + E K   +  +   +   +D + V KEI+   +   G    IS    T  +S +D+
Sbjct:   69 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLKLKKLVNEDKWRGKVSYQDYEIEISDASEVEKEINKAQNAIAGEGMGISHELITLEISSRDV 171          
The following BLAST results are available for this feature:
BLAST of EY702497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
MX3_RAT1.198e-1542.11Interferon-induced GTP-binding protein Mx3 OS=Ratt... [more]
MX_EPICO1.200e-1543.42Interferon-induced GTP-binding protein Mx OS=Epine... [more]
MX1_RAT1.558e-1538.24Interferon-induced GTP-binding protein Mx1 OS=Ratt... [more]
MX1_BOVIN2.024e-1540.79Interferon-induced GTP-binding protein Mx1 OS=Bos ... [more]
MXB_DANRE9.750e-1543.42Interferon-induced GTP-binding protein MxB OS=Dani... [more]
MX2_CANFA1.263e-1444.74Interferon-induced GTP-binding protein Mx2 OS=Cani... [more]
MX1_PIG1.265e-1444.74Interferon-induced GTP-binding protein Mx1 OS=Sus ... [more]
MX_LARCR1.646e-1442.11Interferon-induced GTP-binding protein Mx OS=Larim... [more]
MX1_PONAB3.604e-1443.42Interferon-induced GTP-binding protein Mx1 OS=Pong... [more]
MX1_HUMAN4.681e-1443.42Interferon-induced GTP-binding protein Mx1 OS=Homo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-F08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702497 ID=EY702497; Name=EY702497; organism=Citrus sinensis; type=EST; length=940bp
AACATGGTAGCCTGCAGTACCCGTCCGGAATCCCTTCCCAACCACGCGTC
CGATTGAAAGAATTGCTGGTTGTTACCGTTAGAAATTTCCGCGGGCTCCG
CCTCTCACGTCGAACTGTTCTATCTCCCCGGTTCGTTCACCGATCCAAAA
TCAACATGGCCAATCCCTCCTGCCTGGCGTTTCTTTCTCTTTCCAAAGCC
AAAATTTCAAATCAATACATCCGATAAACAACCCCCCGAGTCGACTCACT
ATCCGAGTCACACACCACCACCACCAATCAACTCAGCGATCAGAATCAGT
CCACACTCATGGATAATTTGATCACATTAGTGAATAAGATTCAAAGAGCG
TGTACGGCCCTAGGCGATCACGGCGAAGAAAGCGCGGTGCCCACTCTCTG
GGACTCCTTACCTTCCATCGCCGTTGTCGGTGGCCAGAGCTCTGGAAAGT
CTTCAGTGTTGGAAAGTGTTGTTGGAAAAGACTTTTTGCCTCGTGGATCA
GGGATTGTTACTCGGAGACCTCTAGTCTTGCAGCTTCATAAGATTCAAGA
AGGAAAAGAATATGCAGAGTTTATGCATCTTCCAAGAAAGAGGTTCAATG
ACTTCGCTGCTGTGAGGAAAGAGATTTCTGATGAGACTGATCGAGAGACT
GGTCGTTCGAAAGCAATCTCTACTGGGTCCCTATCCATTAAGGATATTTT
CTCCTAATGGTGGGAACTTGACCCTGATTGATCTTCCTGGACCTACAACA
GTTGCTGTTGACGGGCCACCTGAGAGCATCGTGCCAGACATCGAAAATAT
GGGTAAGCCCTATATTGGAAAGCCCATTTGTATTATTCTGGCAATTTCTC
CTGGCAATCAGGACCTTGGCACTTCGAATGCAATAAAATCCCCCCGGAAG
GTGGACCCCGAGGGGGGATTTATAAAATTCTCTGGACCCT
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