EY702497

Overview
NameEY702497
Unique NameEY702497
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length940
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702497 vs. ExPASy Swiss-Prot
Match: MX2_ICTPU (Interferon-induced GTP-binding protein Mx2 OS=Ictalurus punctatus GN=mx2 PE=2 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 6.407e-13
Identity = 32/76 (42.11%), Postives = 44/76 (57.89%), Query Frame = 1
Query:  688 LRIFSPNGGNLTLIDLPGPTTVAVDGPPESIVPDIENMGKPYIGKPICIILAISPGNQDLGTSNAIKSPRKVDPEG 915
            L + S N  +LT+IDLPG T VAV   PE+I    + + K +I K   I L + P N D+ T+ A+K   +VDP G
Sbjct:  126 LEVTSSNVPDLTVIDLPGITRVAVKDQPENIGDQSKRLIKKFITKQETINLVVVPCNVDIATTEALKMALEVDPNG 201          

HSP 2 Score: 38.5058 bits (88), Expect = 6.407e-13
Identity = 32/87 (36.78%), Postives = 46/87 (52.87%), Query Frame = 3
Query:  405 SLPSIAXXXXXXXXXXXXLESVVGKDFLPRGSGIVTRRPLVLQLHKIQEGKEYAEFMHLPRKRFNDFAAVRKEISDETDRETGRSKA 665
            +LP+IA            LE++ G   LPRGSGIVTR PL L++ K ++    A+F H  + ++ D+    +EI D  D E    KA
Sbjct:   31 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLELKMKKSRK----ADFWH-GKIKYEDY---EEEIEDPADVEQMIRKA 108          
BLAST of EY702497 vs. ExPASy Swiss-Prot
Match: MX2_MACMU (Interferon-induced GTP-binding protein Mx2 OS=Macaca mulatta GN=MX2 PE=2 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 1.398e-12
Identity = 32/76 (42.11%), Postives = 42/76 (55.26%), Query Frame = 1
Query:  688 LRIFSPNGGNLTLIDLPGPTTVAVDGPPESIVPDIENMGKPYIGKPICIILAISPGNQDLGTSNAIKSPRKVDPEG 915
            L I SP   +LT+IDLPG   VAV   P  I   I+ + K YI +   I L + P N D+ T+ A+    +VDPEG
Sbjct:  211 LEITSPEVPDLTIIDLPGIARVAVGNQPRDIGLQIKALIKRYIQRQQTINLVVVPCNVDIATTEALSMAHEVDPEG 286          

HSP 2 Score: 38.1206 bits (87), Expect = 1.398e-12
Identity = 35/98 (35.71%), Postives = 46/98 (46.94%), Query Frame = 3
Query:  405 SLPSIAXXXXXXXXXXXXLESVVGKDFLPRGSGIVTRRPLVLQLHKIQEGKEYAEFMHLPRK--RFNDFAAVRKEISDETDRETGRSKAISTGSLSIK 692
            +LP+IA            LE++ G   LPRGSGIVTR PLVL+L K Q  K +A  +          D   V KEI    +   G    IS   +S++
Sbjct:  117 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLKLKK-QPYKAWAGRISYQNTEIELQDPGQVEKEIHKAQNVMAGNGLGISHELISLE 212          
BLAST of EY702497 vs. ExPASy Swiss-Prot
Match: MXA_DANRE (Interferon-induced GTP-binding protein MxA OS=Danio rerio GN=mxa PE=2 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 1.402e-12
Identity = 29/76 (38.16%), Postives = 46/76 (60.53%), Query Frame = 1
Query:  688 LRIFSPNGGNLTLIDLPGPTTVAVDGPPESIVPDIENMGKPYIGKPICIILAISPGNQDLGTSNAIKSPRKVDPEG 915
            L+I S +  +LTLIDLPG   VAV G PE+I   I+ + + ++ +   I L + P N D+ T+ A++  +  DP+G
Sbjct:  131 LQITSADVPDLTLIDLPGIARVAVKGQPENIGDQIKRLIRKFVTRQETINLVVVPCNVDIATTEALQMAQAEDPDG 206          

HSP 2 Score: 39.6614 bits (91), Expect = 1.402e-12
Identity = 31/98 (31.63%), Postives = 48/98 (48.98%), Query Frame = 3
Query:  405 SLPSIAXXXXXXXXXXXXLESVVGKDFLPRGSGIVTRRPLVLQLHKIQEGKEYAEFMHLP--RKRFNDFAAVRKEISDETDRETGRSKAISTGSLSIK 692
            +LP+IA            LE++ G   LPRGSGIVTR PL L++ + ++   +   +      + F+D A V K+I    D   G    IS   +S++
Sbjct:   36 ALPAIAVIGDQSSGKSSVLEALSGVP-LPRGSGIVTRCPLELKMIRTKDQDRWHGRISYKTCEEDFDDPAEVEKKIRQAQDEMAGAGVGISEELISLQ 132          
BLAST of EY702497 vs. ExPASy Swiss-Prot
Match: MX_CHICK (Interferon-induced GTP-binding protein Mx OS=Gallus gallus GN=MX PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 3.062e-12
Identity = 32/76 (42.11%), Postives = 45/76 (59.21%), Query Frame = 1
Query:  688 LRIFSPNGGNLTLIDLPGPTTVAVDGPPESIVPDIENMGKPYIGKPICIILAISPGNQDLGTSNAIKSPRKVDPEG 915
            L I+SP+  +LTLIDLPG    AV   P+     I+ + K YIG    II+ + P N D+ T+ A+K  ++VDP G
Sbjct:  208 LEIWSPDVPDLTLIDLPGIAREAVGNQPQDNGQQIKTLLKKYIGCKETIIVVVVPCNVDIATTEALKMAQEVDPTG 283          

HSP 2 Score: 34.2686 bits (77), Expect = 3.062e-12
Identity = 27/97 (27.84%), Postives = 47/97 (48.45%), Query Frame = 3
Query:  408 LPSIAXXXXXXXXXXXXLESVVGKDFLPRGSGIVTRRPLVLQLHKIQEGKEYAEFMHLPRK--RFNDFAAVRKEISDETDRETGRSKAISTGSLSIK 692
            LP+IA            LE++ G   LPR  G++TR PL L+L K+   +E+   ++      +  + + V+K I    D   G + +IS   +S++
Sbjct:  114 LPAIAVIGDRNSGKSSVLEALSGVA-LPRDKGVITRCPLELKLKKMTAPQEWKGVIYYRNTEIQLQNASEVKKAIRKAQDIVAGTNGSISGELISLE 209          
BLAST of EY702497 vs. ExPASy Swiss-Prot
Match: MXE_DANRE (Interferon-induced GTP-binding protein MxE OS=Danio rerio GN=mxe PE=2 SV=1)

HSP 1 Score: 52.373 bits (124), Expect = 3.072e-12
Identity = 30/76 (39.47%), Postives = 42/76 (55.26%), Query Frame = 1
Query:  688 LRIFSPNGGNLTLIDLPGPTTVAVDGPPESIVPDIENMGKPYIGKPICIILAISPGNQDLGTSNAIKSPRKVDPEG 915
            L I S +  +LTLIDLPG   VA    PE I   I+++ + +I +   I L + P N D+ T+ A+K    VDP G
Sbjct:  137 LEIQSCDVPDLTLIDLPGIARVATGNQPEDIEKQIKSLIEKFIKRQETISLVVVPANIDIATTEALKMASTVDPTG 212          

HSP 2 Score: 40.4318 bits (93), Expect = 3.072e-12
Identity = 31/98 (31.63%), Postives = 48/98 (48.98%), Query Frame = 3
Query:  405 SLPSIAXXXXXXXXXXXXLESVVGKDFLPRGSGIVTRRPLVLQLHKIQEGKEYAEFMHLPRK--RFNDFAAVRKEISDETDRETGRSKAISTGSLSIK 692
            +LP+IA            LE++ G   LPRG+GIVTR PLVL+L KI + K +   +    K     D A + K + +      G  + IS   ++++
Sbjct:   42 NLPAIAVIGDQSSGKSSVLEALSGVA-LPRGTGIVTRCPLVLKLKKITKDKSWHGLLTYNDKIRELKDPAKIEKAVLNAQTALAGIGEGISHEMITLE 138          
The following BLAST results are available for this feature:
BLAST of EY702497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
MX2_ICTPU6.407e-1342.11Interferon-induced GTP-binding protein Mx2 OS=Icta... [more]
MX2_MACMU1.398e-1242.11Interferon-induced GTP-binding protein Mx2 OS=Maca... [more]
MXA_DANRE1.402e-1238.16Interferon-induced GTP-binding protein MxA OS=Dani... [more]
MX_CHICK3.062e-1242.11Interferon-induced GTP-binding protein Mx OS=Gallu... [more]
MXE_DANRE3.072e-1239.47Interferon-induced GTP-binding protein MxE OS=Dani... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-F08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702497 ID=EY702497; Name=EY702497; organism=Citrus sinensis; type=EST; length=940bp
AACATGGTAGCCTGCAGTACCCGTCCGGAATCCCTTCCCAACCACGCGTC
CGATTGAAAGAATTGCTGGTTGTTACCGTTAGAAATTTCCGCGGGCTCCG
CCTCTCACGTCGAACTGTTCTATCTCCCCGGTTCGTTCACCGATCCAAAA
TCAACATGGCCAATCCCTCCTGCCTGGCGTTTCTTTCTCTTTCCAAAGCC
AAAATTTCAAATCAATACATCCGATAAACAACCCCCCGAGTCGACTCACT
ATCCGAGTCACACACCACCACCACCAATCAACTCAGCGATCAGAATCAGT
CCACACTCATGGATAATTTGATCACATTAGTGAATAAGATTCAAAGAGCG
TGTACGGCCCTAGGCGATCACGGCGAAGAAAGCGCGGTGCCCACTCTCTG
GGACTCCTTACCTTCCATCGCCGTTGTCGGTGGCCAGAGCTCTGGAAAGT
CTTCAGTGTTGGAAAGTGTTGTTGGAAAAGACTTTTTGCCTCGTGGATCA
GGGATTGTTACTCGGAGACCTCTAGTCTTGCAGCTTCATAAGATTCAAGA
AGGAAAAGAATATGCAGAGTTTATGCATCTTCCAAGAAAGAGGTTCAATG
ACTTCGCTGCTGTGAGGAAAGAGATTTCTGATGAGACTGATCGAGAGACT
GGTCGTTCGAAAGCAATCTCTACTGGGTCCCTATCCATTAAGGATATTTT
CTCCTAATGGTGGGAACTTGACCCTGATTGATCTTCCTGGACCTACAACA
GTTGCTGTTGACGGGCCACCTGAGAGCATCGTGCCAGACATCGAAAATAT
GGGTAAGCCCTATATTGGAAAGCCCATTTGTATTATTCTGGCAATTTCTC
CTGGCAATCAGGACCTTGGCACTTCGAATGCAATAAAATCCCCCCGGAAG
GTGGACCCCGAGGGGGGATTTATAAAATTCTCTGGACCCT
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