DY257529

Overview
NameDY257529
Unique NameDY257529
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1011
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257529 vs. ExPASy Swiss-Prot
Match: SCL31_ARATH (Scarecrow-like protein 31 OS=Arabidopsis thaliana GN=SCL31 PE=2 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 2.657e-31
Identity = 79/267 (29.59%), Postives = 135/267 (50.56%), Query Frame = 2
Query:   14 IIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACE-VERQHLRVQPGEAVVVNFPFVLHHMPDESVSTEN-HRDRLLRLVKSLSPKVVTLVEQESKTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLK--DYDSNYRVEENDGALYLGWRNRAMATSSAW 802
            ++HI+DF I  G QW   +  L+K   G   +RITGI+  Q        +   G+RL+E+     VPFE+   A    E ++ +  +++P E + VN      ++ D     E+  RD  L+L++ ++P V          N   F  RF E L +Y+A+F+    T  +++ +RI  E     R+++N+IACEG++RVER E   +W+ R + AGF    +   +    R+ +K   Y  ++ ++E+      GW+ R + +SS W
Sbjct:  393 VLHIVDFGILYGFQWPMFIQHLSKSNPGLRKLRITGIEIPQHGLRPTERIQDTGRRLTEYCKRFGVPFEYNAIASKNWETIKMEEFKIRPNEVLAVNAVLRFKNLRDVIPGEEDCPRDGFLKLIRDMNPNVFLSSTVNGSFNAPFFTTRFKEALFHYSALFDLFGATLSKENPERIHFEGEFYGREVMNVIACEGVDRVERPETYKQWQVRMIRAGFKQKPVEAELVQLFREKMKKWGYHKDFVLDEDSNWFLQGWKGRILFSSSCW 659          
BLAST of DY257529 vs. ExPASy Swiss-Prot
Match: SCL18_ARATH (Scarecrow-like protein 18 OS=Arabidopsis thaliana GN=SCL18 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.010e-30
Identity = 81/276 (29.35%), Postives = 140/276 (50.72%), Query Frame = 2
Query:   17 IHIIDFQIAQGTQWMFLLHALAKRPGGS----PLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEF-------QDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESKTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDY--DSNYRVEENDGALYLGWRNRAMATSSAWK 805
            +HI+D  I+QG QW  L+ ALA+R        P +RITG     +      GL+  G RL+ FA S  + F+F       +D A    ++    L    GE + VN    LH + ++      H    L  +KSL+ ++VT+ E+E+      F +RF E +D+Y A+F+S++ T P + ++R++ EQ    ++I++++A E  ER +RH     W       GF    +     +  + +L+ +     Y ++  + +L+LGW+NR + + S+WK
Sbjct:  179 LHILDLDISQGLQWPPLMQALAERSSNPSSPPPSLRITGCGRDVT------GLNRTGDRLTRFADSLGLQFQFHTLVIVEEDLAGLLLQIRLLALSAVQGETIAVNCVHFLHKIFNDDGDMIGH---FLSAIKSLNSRIVTMAEREANHGDHSFLNRFSEAVDHYMAIFDSLEATLPPNSRERLTLEQRWFGKEILDVVAAEETERKQRHRRFEIWEEMMKRFGFVNVPIGSFALSQAKLLLRLHYPSEGYNLQFLNNSLFLGWQNRPLFSVSSWK 445          
BLAST of DY257529 vs. ExPASy Swiss-Prot
Match: SCL23_ARATH (Scarecrow-like protein 23 OS=Arabidopsis thaliana GN=SCL23 PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.904e-29
Identity = 89/276 (32.25%), Postives = 135/276 (48.91%), Query Frame = 2
Query:    2 ENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQD-TAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQE-SKTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRL--SPLVTNAVRDVLKDYDSNYRVEENDGALYLGWRNRAMATSSAWK*KTF 817
            + E  +HIID  + QG QW  L H LA RP     +RITG   S         L   G+RL++FA+S N+PFEF     +    ++   L  + GEAVVV      H M         +    L +++ L P ++T+VEQE S  +   F  RF+E L YY+A+F+++      +  +R + EQ  +  +I N++A  G  R        KW+      GF P  L  +P     +   +  ++    VEEN G L LGW++ ++ T+SAWK + F
Sbjct:  147 DGEDSVHIIDLDVMQGLQWPALFHILASRPRKLRSIRITGFGSSSDL------LASTGRRLADFASSLNLPFEFHPIEGIIGNLIDPSQLATRQGEAVVV------HWMQHRLYDVTGNNLETLEILRRLKPNLITVVEQELSYDDGGSFLGRFVEALHYYSALFDALGDGLGEESGERFTVEQIVLGTEIRNIVAHGGGRRKRM-----KWKEELSRVGFRPVSLRGNPATQAGLLLGMLPWNGYTLVEEN-GTLRLGWKDLSLLTASAWKSQPF 404          
BLAST of DY257529 vs. ExPASy Swiss-Prot
Match: SCL28_ARATH (Scarecrow-like protein 28 OS=Arabidopsis thaliana GN=SCL28 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 9.450e-29
Identity = 91/281 (32.38%), Postives = 130/281 (46.26%), Query Frame = 2
Query:    2 ENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESKTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDSN----YRVEEND----------GALYLGWRNRAMATSSAW 802
            E +  +HIIDF I QG QW     +LA R      VRITGI +S+        L+  G RL  FA + N+ FEF        +V    L V+ GE+V VN    +H    +       RD  L L++S +P  + L EQE++ N+     R   +L YY+AMF++I      D   R+  E+    R+I N++ACEG  R ERH     WR      GF    +S       + +L+ Y S+    + VE +D          G + L W  + + T SAW
Sbjct:  381 EGKERVHIIDFDIKQGLQWPSFFQSLASRINPPHHVRITGIGESKLE------LNETGDRLHGFAEAMNLQFEFHPVVDRLEDVRLWMLHVKEGESVAVNCVMQMHKTLYDGTGAAI-RD-FLGLIRSTNPIALVLAEQEAEHNSEQLETRVCNSLKYYSAMFDAIHTNLATDSLMRVKVEEMLFGREIRNIVACEGSHRQERHVGFRHWRRMLEQLGFRSLGVSEREVLQSKMLLRMYGSDNEGFFNVERSDEDNGGEGGRGGGVTLRWSEQPLYTISAW 653          
BLAST of DY257529 vs. ExPASy Swiss-Prot
Match: SHR_ARATH (Protein SHORT-ROOT OS=Arabidopsis thaliana GN=SHR PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 9.153e-24
Identity = 84/287 (29.27%), Postives = 136/287 (47.39%), Query Frame = 2
Query:    2 ENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGI-------DDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTA--CEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESKTN-------TSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDSNY--RVEENDGA-LYLGWRNRAMATSSAWK 805
            + E  IHI+D      TQW  LL ALA R   +P +R+T +       +D  ++H     +  +G R+ +FA    VPF+F          E +   L V+P E + +N    +H +     S  + RD ++   + L P++VT+VE+E+             F   F E L ++   FES + + PR   +R+  E+    R IV+++ACE  +  ER E   KW  R   +GF     S  V + VR +L+ Y       V+  D A ++L WR++ +  +SAW+
Sbjct:  251 DGEAKIHIVDISSTFCTQWPTLLEALATRSDDTPHLRLTTVVVANKFVNDQTASHRM---MKEIGNRMEKFARLMGVPFKFNIIHHVGDLSEFDLNELDVKPDEVLAINCVGAMHGI----ASRGSPRDAVISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWFRVCFESWEESFPRTSNERLMLER-AAGRAIVDLVACEPSDSTERRETARKWSRRMRNSGFGAVGYSDEVADDVRALLRRYKEGVWSMVQCPDAAGIFLCWRDQPVVWASAWR 529          
BLAST of DY257529 vs. ExPASy Swiss-Prot
Match: NSP2_MEDTR (Nodulation-signaling pathway 2 protein OS=Medicago truncatula GN=NSP2 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.726e-22
Identity = 81/273 (29.67%), Postives = 131/273 (47.99%), Query Frame = 2
Query:    5 NEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEVERQH-LRVQPGEAVVVNFPFVLHHMP---DESVSTENHRDRLLRLVKSLSPKVVTLVEQESKTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDSNYRVEE---NDGALYLGWRNRAMATSSAW 802
            +E  +H+ID+ I +G QW  L+ +LA    G P +RIT +  + +       +   G+RL+ FAAS   PF F    + + E  R   L++  GEA+V N    L H+     ESV++       L   K+L+PK+VTLVE+E  +    F  RF+++L +Y+A+F+S++   P  ++ R   E+      I   +    I R    E    W       GF    +S       + +L  ++  YRVEE       L L W++R + ++S W
Sbjct:  236 HERRVHVIDYDIMEGVQWASLIQSLASNNNG-PHLRITALSRTGTGRRSIATVQETGRRLTSFAASLGQPFSFHHCRLDSDETFRPSALKLVRGEALVFNCMLNLPHLSYRAPESVAS------FLNGAKTLNPKLVTLVEEEVGSVIGGFVERFMDSLHHYSAVFDSLEAGFPMQNRARTLVERVFFGPRIAGSLG--RIYRTGGEEERRSWGEWLGEVGFRGVPVSFANHCQAKLLLGLFNDGYRVEEVGVGSNKLVLDWKSRRLLSASLW 499          
BLAST of DY257529 vs. ExPASy Swiss-Prot
Match: MOC_ORYSJ (Protein MONOCULM 1 OS=Oryza sativa subsp. japonica GN=MOC1 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.726e-22
Identity = 82/294 (27.89%), Postives = 128/294 (43.54%), Query Frame = 2
Query:   17 IHIIDFQIAQGTQWMFLLHALAKRPG---GSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEVERQH--------------------LRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESKTNTSPFFH------RFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDY--DSNYRVEENDGALYLGWRNRAMATSSAWK 805
            +HI+D     G QW  LL A+A+R     G P VR+TG    + T  R       G RL  FA S ++PF F    ++       H                    L   P E + VN    LH++     +  +     L+ VK++SP VVT+ E+E+        H      R    +D+Y+A+FE+++ T P   ++R++ EQ  + R+I   +   G       E   +W      AGF    LS    +  R +L+ +     Y V+E  GA +LGW+ R + + SAW+
Sbjct:  158 VHILDLDAVHGVQWPPLLQAIAERADPALGPPEVRVTGAGADRDTLLR------TGNRLRAFARSIHLPFHFTPLLLSCATTAPHHVAGTSTGAAAAASTAAAATGLEFHPDETLAVNCVMFLHNL-----AGHDELAAFLKWVKAMSPAVVTIAEREAGGGGGGGDHIDDLPRRVGVAMDHYSAVFEALEATVPPGSRERLAVEQEVLGREIEAAVGPSGGRWWRGIE---RWGGAARAAGFAARPLSAFAVSQARLLLRLHYPSEGYLVQEARGACFLGWQTRPLLSVSAWQ 437          
BLAST of DY257529 vs. ExPASy Swiss-Prot
Match: SCL26_ARATH (Scarecrow-like protein 26 OS=Arabidopsis thaliana GN=SCL26 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 8.567e-22
Identity = 76/269 (28.25%), Postives = 124/269 (46.10%), Query Frame = 2
Query:    8 EHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPL--VRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQE-SKTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDSNYRVEE-NDGALYLGWRNRAMATSSAW 802
            E  IHI+D+ I +G QW  L+ AL  R  G     +RIT +  + +       +   G+RL+ FA S   PF +Q   +         L++  GEAVV+N    + H+P  S  T +     L   K+L+PK+VTLV +E        F +RF++ L  ++A+F+S++      +  R   E+  +   + N +        E  E    W       GF P  +S       + +L  ++  +RVEE     L LGW++R + ++S W
Sbjct:  212 ERRIHIVDYDINEGVQWASLMQALVSRNTGPSAQHLRITALSRATNGKKSVAAVQETGRRLTAFADSIGQPFSYQHCKLDTNAFSTSSLKLVRGEAVVIN---CMLHLPRFSHQTPSSVISFLSEAKTLNPKLVTLVHEEVGLMGNQGFLYRFMDLLHQFSAIFDSLEAGLSIANPARGFVERVFIGPWVANWLTRITANDAE-VESFASWPQWLETNGFKPLEVSFTNRCQAKLLLSLFNDGFRVEELGQNGLVLGWKSRRLVSASFW 476          
BLAST of DY257529 vs. ExPASy Swiss-Prot
Match: SCL3_ARATH (Scarecrow-like protein 3 OS=Arabidopsis thaliana GN=SCL3 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.461e-21
Identity = 56/150 (37.33%), Postives = 81/150 (54.00%), Query Frame = 2
Query:  359 DRLLRLVKSLSPKVVTLVEQESKTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYD-SNYRVEENDGALYLGWRNRAMATSSAWK 805
            D  L  +  LSPKV+ + EQ+S  N S    R LE+L  Y A+F+ ++   PR  + RI  E+     +I N+I+CEG ER ERHE L KW  R  +AGF    LS       R +L+      YR++E  G   + W++R + + SAW+
Sbjct:  330 DSFLNAIWGLSPKVMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLETKVPRTSQDRIKVEKMLFGEEIKNIISCEGFERRERHEKLEKWSQRIDLAGFGNVPLSYYAMLQARRLLQGCGFDGYRIKEESGCAVICWQDRPLYSVSAWR 479          
BLAST of DY257529 vs. ExPASy Swiss-Prot
Match: SHR2_ORYSI (Protein SHORT-ROOT 2 OS=Oryza sativa subsp. indica GN=SHR2 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 9.471e-21
Identity = 82/293 (27.99%), Postives = 137/293 (46.76%), Query Frame = 2
Query:   17 IHIIDFQIAQGTQWMFLLHALAKRPGG-SPLVRITGIDDSQSTHARGGG-LDIVGKRLSEFAASCNVPFEFQDT--AMTACEVERQHLRVQPG---EAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQE-----------SKTNTSPFFHR-FLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDSNYRVEENDGA-----------LYLGWRNRAMATSSAWK 805
            +HI+D      TQW  LL ALA R    +P + IT +  + +  A     +  +G+RL +FA    VPF F+    A    +++   L ++ G    A+ VN    L             RD  +  ++ L P+VVT+VE+E           S+ +T   F + F E L +++A  +S++ + P+   +R+S E+  V R IV++++C   +  ER E    W  R   AGF+P   S  V + VR +L+ Y   + + +  GA            +L W+ + +  +SAWK
Sbjct:  318 LHILDLSNTFCTQWPTLLEALATRSSDDTPHLSITTVVPTAAPSAAAQRVMREIGQRLEKFARLMGVPFSFRAVHHAGDLADLDLAALDLREGGATAALAVNCVNALR-------GVARGRDAFVASLRRLEPRVVTVVEEEADLAAPEADASSEADTDAAFVKVFGEGLRFFSAYMDSLEESFPKTSNERLSLER-AVGRAIVDLVSCPASQSAERRETAASWARRMRSAGFSPAAFSEDVADDVRSLLRRYKEGWSMRDAGGATDDAAGAAAAGAFLAWKEQPVVWASAWK 602          
The following BLAST results are available for this feature:
BLAST of DY257529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
SCL31_ARATH2.657e-3129.59Scarecrow-like protein 31 OS=Arabidopsis thaliana ... [more]
SCL18_ARATH1.010e-3029.35Scarecrow-like protein 18 OS=Arabidopsis thaliana ... [more]
SCL23_ARATH1.904e-2932.25Scarecrow-like protein 23 OS=Arabidopsis thaliana ... [more]
SCL28_ARATH9.450e-2932.38Scarecrow-like protein 28 OS=Arabidopsis thaliana ... [more]
SHR_ARATH9.153e-2429.27Protein SHORT-ROOT OS=Arabidopsis thaliana GN=SHR ... [more]
NSP2_MEDTR1.726e-2229.67Nodulation-signaling pathway 2 protein OS=Medicago... [more]
MOC_ORYSJ1.726e-2227.89Protein MONOCULM 1 OS=Oryza sativa subsp. japonica... [more]
SCL26_ARATH8.567e-2228.25Scarecrow-like protein 26 OS=Arabidopsis thaliana ... [more]
SCL3_ARATH1.461e-2137.33Scarecrow-like protein 3 OS=Arabidopsis thaliana G... [more]
SHR2_ORYSI9.471e-2127.99Protein SHORT-ROOT 2 OS=Oryza sativa subsp. indica... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK3AC01FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257529 ID=DY257529; Name=DY257529; organism=Citrus sinensis; type=EST; length=1011bp
GGAGAATGAACATATAATTCACATCATTGATTTCCAGATTGCTCAGGGCA
CCCAGTGGATGTTCCTCCTCCATGCTCTTGCAAAACGGCCTGGTGGATCC
CCACTTGTCCGCATAACTGGGATTGATGATTCCCAATCAACCCATGCTCG
TGGTGGAGGACTTGATATTGTAGGGAAGAGACTGTCGGAGTTTGCTGCAT
CCTGCAATGTCCCATTTGAATTCCAAGATACTGCCATGACTGCTTGTGAG
GTTGAACGACAACATCTAAGGGTTCAACCTGGGGAAGCTGTGGTGGTGAA
TTTTCCTTTTGTGCTGCACCACATGCCTGATGAGAGTGTGAGTACTGAGA
ATCATAGAGACAGGCTATTGAGACTGGTTAAAAGCTTGTCACCCAAAGTT
GTGACCCTTGTTGAACAAGAATCCAAAACCAATACATCTCCATTCTTTCA
CAGGTTCCTTGAGACACTGGATTATTATACAGCTATGTTTGAGAGCATTG
ATGTTACTCGTCCAAGGGATGACAAGCAACGTATCAGTGCAGAGCAGCAC
TGTGTGGCCCGGGACATAGTCAACATGATAGCTTGTGAGGGGATTGAAAG
GGTGGAACGGCATGAACTTCTTGGTAAGTGGAGATCACGTTTTATGATGG
CAGGATTTACCCCATATCGATTGAGTCCTTTGGTGACAAATGCTGTGAGG
GATGTATTGAAAGACTATGATAGTAACTATAGAGTTGAAGAGAATGATGG
GGCTCTTTATCTCGGCTGGAGAAACAGAGCTATGGCCACCTCTTCTGCAT
GGAAATGAAAAACCTTTAAAAAACTCTGTATAATTAACCCCCCCAGTTTT
TGTTGTAGCTTTTAAAGCACGAGTCATAGTGATATTTTTTATTTGTAACT
TAATAAAACCGAAAGTAACTGTCAATTATCCTCTAATAAAACCTCCAACT
TTTCTGGTAAATGTCCACGTTTGGTAAAATAAAAAGCCGAAACGGGTTTA
AATTTTTAACG
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