EY702494
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702494 vs. ExPASy Swiss-Prot
Match: CPNE4_HUMAN (Copine-4 OS=Homo sapiens GN=CPNE4 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.322e-13 Identity = 50/154 (32.47%), Postives = 72/154 (46.75%), Query Frame = 2 Query: 242 VGIDFTKSNEWTGARSFQRRSLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGD------ASTHDQEVFSFYPDEKFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMAITIVEH-----SGGQYHVLVIIADGQVTXSVDTEHGAI 667 V IDFT SN SLH+I Q N Y +A+ +G+ +D D + P FGFG +HD + +F D C G + V+ Y+ +P L+L GPT+ APII+ QY +L+I+ DG +T DT + Sbjct: 310 VAIDFTASN----GDPRNSCSLHYIHPYQPNEYLKALVAVGEICQDYDSDKMFPAFGFGARIPPEYTVSHDFAI-NFNEDNPECAGIQGVVEAYQSCLPKLQLYGPTNIAPIIQKVAKSASEETNTKEASQYFILLILTDGVITDMADTREAIV 458
BLAST of EY702494 vs. ExPASy Swiss-Prot
Match: CPNA_DICDI (Copine-A OS=Dictyostelium discoideum GN=cpnA PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.649e-12 Identity = 53/159 (33.33%), Postives = 72/159 (45.28%), Query Frame = 2 Query: 233 NLIVGIDFTKSNEWTGARSFQRRSLHHIG-DDQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSFYP-----DEKFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMAITIV----EHSGGQYHVLVIIADGQVTXSVDTEHGAISSQG 679 NLIVGID T SN S SLH+ N Y AI +G + + LIP +GFG EV +P C G VL Y + + ++L GPT FAP+I MA S +Y +L+II DG++ + +T + S G Sbjct: 286 NLIVGIDCTASN----GDSNDPNSLHYKNAQGLNQYANAICSVGNVIVPYTTTPLIPVYGFGGIMPGQSEVSHCFPMTLNASNTLCCGVNGVLDCYYDNISKIQLHGPTYFAPLINMAARYASQGQSQSNQKYTILMIITDGEILDADNTIDAIVKSSG 440
BLAST of EY702494 vs. ExPASy Swiss-Prot
Match: CPNE6_PONAB (Copine-6 OS=Pongo abelii GN=CPNE6 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.265e-12 Identity = 54/148 (36.49%), Postives = 71/148 (47.97%), Query Frame = 2 Query: 242 VGIDFTKSNEWTGARSFQRRSLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEV-----FSFYPDEKFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMAITIV--EHSGGQ---YHVLVIIADGQVTXSVDT 652 V IDFT SN RS Q SLH + Q N Y QA+ +G +D D P FGFG + EV +F P+ C V+ YR +P ++L GPT+ APII E S GQ Y VL+++ DG V+ +T Sbjct: 309 VAIDFTASNG--DPRSSQ--SLHCLSPRQPNHYLQALRAVGGICQDYDSDKRFPAFGFGARIPPNFEVSHDFAINFDPENPECEEISGVIASYRRCLPQIQLYGPTNVAPIINRVAEPAQREQSTGQATKYSVLLVLTDGVVSDMAET 452
BLAST of EY702494 vs. ExPASy Swiss-Prot
Match: CPNE6_MOUSE (Copine-6 OS=Mus musculus GN=Cpne6 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.265e-12 Identity = 54/148 (36.49%), Postives = 71/148 (47.97%), Query Frame = 2 Query: 242 VGIDFTKSNEWTGARSFQRRSLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEV-----FSFYPDEKFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMAITIV--EHSGGQ---YHVLVIIADGQVTXSVDT 652 V IDFT SN RS Q SLH + Q N Y QA+ +G +D D P FGFG + EV +F P+ C V+ YR +P ++L GPT+ APII E S GQ Y VL+++ DG V+ +T Sbjct: 309 VAIDFTASNG--DPRSSQ--SLHCLSPRQPNHYLQALRTVGGICQDYDSDKRFPAFGFGARIPPNFEVSHDFAINFDPENPECEEISGVIASYRRCLPQIQLYGPTNVAPIINRVAEPAQREQSTGQATKYSVLLVLTDGVVSDMAET 452
BLAST of EY702494 vs. ExPASy Swiss-Prot
Match: CPNE6_HUMAN (Copine-6 OS=Homo sapiens GN=CPNE6 PE=1 SV=3) HSP 1 Score: 71.633 bits (174), Expect = 6.265e-12 Identity = 54/148 (36.49%), Postives = 71/148 (47.97%), Query Frame = 2 Query: 242 VGIDFTKSNEWTGARSFQRRSLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEV-----FSFYPDEKFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMAITIV--EHSGGQ---YHVLVIIADGQVTXSVDT 652 V IDFT SN RS Q SLH + Q N Y QA+ +G +D D P FGFG + EV +F P+ C V+ YR +P ++L GPT+ APII E S GQ Y VL+++ DG V+ +T Sbjct: 309 VAIDFTASNG--DPRSSQ--SLHCLSPRQPNHYLQALRAVGGICQDYDSDKRFPAFGFGARIPPNFEVSHDFAINFDPENPECEEISGVIASYRRCLPQIQLYGPTNVAPIINRVAEPAQREQSTGQATKYSVLLVLTDGVVSDMAET 452
BLAST of EY702494 vs. ExPASy Swiss-Prot
Match: CPNE6_BOVIN (Copine-6 OS=Bos taurus GN=CPNE6 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.182e-12 Identity = 54/148 (36.49%), Postives = 71/148 (47.97%), Query Frame = 2 Query: 242 VGIDFTKSNEWTGARSFQRRSLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEV-----FSFYPDEKFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMAITIV--EHSGGQ---YHVLVIIADGQVTXSVDT 652 V IDFT SN RS Q SLH + Q N Y QA+ +G +D D P FGFG + EV +F P+ C V+ YR +P ++L GPT+ APII E S GQ Y VL+++ DG V+ +T Sbjct: 309 VAIDFTASNG--DPRSSQ--SLHCLSPRQPNHYLQALRAVGGICQDYDSDKRFPAFGFGARIPPNFEVSHDFAINFDPENPECEEISGVIASYRRCLPQIQLYGPTNVAPIINRVAGPAQREQSTGQATKYSVLLVLTDGVVSDMAET 452
BLAST of EY702494 vs. ExPASy Swiss-Prot
Match: CPNE_DICDI (Copine-E OS=Dictyostelium discoideum GN=cpnE PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.381e-11 Identity = 56/194 (28.87%), Postives = 95/194 (48.97%), Query Frame = 2 Query: 233 NLIVGIDFTKSNEWTGARSFQRRSLHH-IGDDQNPYEQAISIIGKTLSSFDEDNLIPCFGFG-----DASTHDQEVFSFYPDEKFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMA----ITIVEHSGGQYHVLVIIADGQVTXSVDTEHGAISSQGKETG*SIC*SE*GPLGDYIRLG*EMGPWDLMREID 784 NL++ ID T SN R+ SLH+ ++ Y ++I +G L+ +D D I GFG ++H F F P + G EEVL Y +++P ++L+ PT+F II+ A I V+ +Y +L+I+ DG++T +T + + K PL I +G + ++LM+++D Sbjct: 345 NLMIAIDCTASNGMPSDRT----SLHYNTPTHESEYARSILAVGNVLAPYDSDGKIELLGFGAERFGGVTSH---CFQFGPKAE-ARGIEEVLSTYNKVIPTIKLSYPTNFQEIIKHAHKKSIKGVDSKNQKYTILLILTDGEITDMEETIEEIVKASSK-----------APLSIVI-VGVGIASFELMKKLD 518 The following BLAST results are available for this feature:
BLAST of EY702494 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY702494 ID=EY702494; Name=EY702494; organism=Citrus sinensis; type=EST; length=859bpback to top |