EY702485

Overview
NameEY702485
Unique NameEY702485
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length837
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702485 vs. ExPASy Swiss-Prot
Match: GL15_ARATH (Germin-like protein subfamily 1 member 5 OS=Arabidopsis thaliana GN=At3g04190 PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.693e-52
Identity = 105/186 (56.45%), Postives = 128/186 (68.82%), Query Frame = 1
Query:   97 DPGHLQGGWGAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGGNPSINPDFLGKAFQLD 654
            +P  LQ    A N+  +GV+VNGKFCKDPK   A DF+ SGL  PGNT+   GV  T  +V+++PGLNTLG+   RID+AP G  PPH HPR SEIFLV++G L+VGFV+S++ N TL  KVL  GDVFVFP+GLI F  NIGKTNA   +A  SQ PG + I + VFG  P I+P  L KAF LD
Sbjct:   26 EPSPLQDYCVATNET-NGVYVNGKFCKDPKCVTANDFYTSGLNVPGNTSTGPGVKITVVDVKRMPGLNTLGVDIARIDFAPGGLYPPHTHPRGSEIFLVMKGKLFVGFVSSNEYNYTLFTKVLYPGDVFVFPKGLIQFHANIGKTNAVVIAATGSQNPGRIIIGNAVFGSKPLIDPKVLAKAFALD 210          
BLAST of EY702485 vs. ExPASy Swiss-Prot
Match: GLP1_MESCR (Germin-like protein OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 1.023e-51
Identity = 102/172 (59.30%), Postives = 117/172 (68.02%), Query Frame = 1
Query:   94 TDPGHLQGGWGAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLN--NTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFG 603
            TDP  LQ     +N P DG+FVNG FCKDP     +DF F GL  P NT N LG   T      +PGLNTLGIS  R+D+AP+G  PPH HPRA+E+F+VLEGT YVGFVTS+  +  N L AKVLNKGDVFVFPQGLIHFQ NIG       S L+SQ PG +TIA+ VFG
Sbjct:   23 TDPTQLQDFCVGVNKPNDGLFVNGLFCKDPMEVNPDDFLFRGLNMPANTDNALGFAATLVTAANLPGLNTLGISVARLDFAPHGLNPPHTHPRATEVFVVLEGTFYVGFVTSNLADGGNKLFAKVLNKGDVFVFPQGLIHFQLNIGNYPGVGISGLSSQNPGVITIANAVFG 194          
BLAST of EY702485 vs. ExPASy Swiss-Prot
Match: GL14_ARATH (Germin-like protein subfamily 1 member 4 OS=Arabidopsis thaliana GN=At3g04180 PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.337e-51
Identity = 104/186 (55.91%), Postives = 125/186 (67.20%), Query Frame = 1
Query:   97 DPGHLQGGWGAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGGNPSINPDFLGKAFQLD 654
            DP  LQ    A N+  +GV+VNG+FCKDPK     DF+ SGL  PGNT    G   T  +VE++PGLNTLG+   R D+AP G  PPH HPR S+IFLV++G L+VGFV+S++ N TL  KVL  GDVFVFP+GLIHF  NIG+TNA   SA  SQ PG + I D VFG  P I+P  L KAF LD
Sbjct:   26 DPSPLQDYCVATNET-NGVYVNGEFCKDPKRVTTNDFYTSGLNVPGNTIIGPGARNTVVDVERLPGLNTLGVDIARYDFAPGGLDPPHTHPRGSQIFLVMKGKLFVGFVSSNEYNYTLFTKVLYPGDVFVFPKGLIHFHANIGETNAVVISAGGSQDPGRIIIGDAVFGSKPLIDPKVLAKAFALD 210          
BLAST of EY702485 vs. ExPASy Swiss-Prot
Match: GL82_ORYSJ (Germin-like protein 8-2 OS=Oryza sativa subsp. japonica GN=GER3 PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.280e-51
Identity = 112/194 (57.73%), Postives = 138/194 (71.13%), Query Frame = 1
Query:   94 TDPGHLQGGWGAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIADTVFGGNPSINPDFLGKAFQLDPKIVE 669
            +DP  LQ     + D    V VNG  CK+P  A A+DFF +  L KP +T N++G + T  NV Q+PGLNTLGIS  R+D+AP G  PPH HPRA+EIF VLEGTLYVGFVTS+  +N L++KVLNKGDVFVFP+GLIHFQFN      A A +AL+SQ PG +TIA+ VFG NP I+ D L KAFQ+D KI++
Sbjct:   25 SDPSPLQDF--CVADLNSPVRVNGFVCKNPMNASADDFFKAAMLDKPRDTNNKVGSNVTLVNVLQLPGLNTLGISIARLDFAPLGLNPPHTHPRATEIFTVLEGTLYVGFVTSNP-DNRLLSKVLNKGDVFVFPEGLIHFQFNPNPHKPAVAIAALSSQNPGVITIANAVFGSNPPISDDILMKAFQVDKKIID 215          
BLAST of EY702485 vs. ExPASy Swiss-Prot
Match: GL81_ORYSJ (Putative germin-like protein 8-1 OS=Oryza sativa subsp. japonica GN=Os08g0188900 PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.251e-49
Identity = 108/183 (59.02%), Postives = 132/183 (72.13%), Query Frame = 1
Query:  130 INDPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTA-NRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIADTVFGGNPSINPDFLGKAFQLDPKIVE 669
            + D    V VNG  CK+P    A+DFF +  L KP +TA N++G + T  NV +IPGLNTLGIS  R+DYAP G  PPH HPRA+EIF VLEGTLYVGFVTS+  +N L +KVLNKGDVFVFP+GLIHFQFN+     A A SA++SQ PG +TIA+ VF  NP I+ D L KAFQ+D KI++
Sbjct:   34 VADLNSAVRVNGFACKNPTNVSADDFFKAAMLDKPRDTAVNKVGSNITLINVMEIPGLNTLGISIVRVDYAPLGLNPPHTHPRATEIFTVLEGTLYVGFVTSNP-DNKLFSKVLNKGDVFVFPKGLIHFQFNLDPHKPAIATSAISSQNPGIITIANAVFRSNPPISDDILAKAFQVDKKIID 215          
BLAST of EY702485 vs. ExPASy Swiss-Prot
Match: GL87_ORYSJ (Germin-like protein 8-7 OS=Oryza sativa subsp. japonica GN=GER6 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.634e-49
Identity = 107/193 (55.44%), Postives = 129/193 (66.84%), Query Frame = 1
Query:   94 TDPGHLQGGWGAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIADTVFGGNPSINPDFLGKAFQLDPKIVE 669
            +DP  LQ     + D    V VNG  C DPK   A+ FF + +       N++G + T  NV QIPGLNTLGIS  RIDYAP G+ PPH HPRA+EI  VLEGTLYVGFVTS+  NNTL +KVLNKGDVFVFP+GLIHFQFN      A A +AL+SQ PG +TIA+ VFG  P I+ D L KAFQ++   ++
Sbjct:   24 SDPSPLQDF--CVADKHSPVLVNGFACLDPKYVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNP-NNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVALAALSSQNPGAITIANAVFGSKPPISDDILAKAFQVEKGTID 213          
BLAST of EY702485 vs. ExPASy Swiss-Prot
Match: GL41_ORYSJ (Germin-like protein 4-1 OS=Oryza sativa subsp. japonica GN=Os04g0617900 PE=2 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 6.209e-49
Identity = 109/201 (54.23%), Postives = 125/201 (62.19%), Query Frame = 1
Query:   94 TDPGHLQGGWGAINDPKDGVFVNGKFCKDPKLARAEDFFF-SGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQL--NNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGGNPSINPDFLGKAFQLDPKIVEDPSNKF 687
            +DP  LQ     + D    VFVNG  CK+PK   A DFF    LG PGNT N  G   T   V ++PGLNTLGIS  RID+AP GQ PPH HPRA+EI  VL+GTL VGFVTS+Q    N    K+L  GDVFVFPQGLIHFQ N G   A A +AL+SQ PG +TIA+ VFG  P I  D L KAF +D   V+    KF
Sbjct:   28 SDPSQLQDF--CVADKLSAVFVNGFVCKNPKQVTANDFFLPKALGVPGNTVNAQGSAVTPVTVNELPGLNTLGISFARIDFAPNGQNPPHTHPRATEILTVLQGTLLVGFVTSNQPGGGNLQFTKLLGPGDVFVFPQGLIHFQLNNGAVPAVAIAALSSQNPGVITIANAVFGSTPPILDDVLAKAFMIDKDQVDWIQAKF 226          
BLAST of EY702485 vs. ExPASy Swiss-Prot
Match: GL88_ORYSJ (Germin-like protein 8-8 OS=Oryza sativa subsp. japonica GN=Os08g0189700 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.806e-48
Identity = 106/193 (54.92%), Postives = 128/193 (66.32%), Query Frame = 1
Query:   94 TDPGHLQGGWGAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIADTVFGGNPSINPDFLGKAFQLDPKIVE 669
            +DP  LQ     + D    V VNG  C DPK   A+ FF + +       N++G + T  NV QIPGLNTLGIS  RIDYAP G+ PPH HPRA+EI  VLEGTLYVGFVTS+  NNTL +KVLNKGDVFVFP+GLIHFQFN      A A +AL+SQ PG +TIA+ VFG  P I+   L KAFQ++   ++
Sbjct:   23 SDPSPLQDF--CVADKHSPVLVNGFACLDPKYVTADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNP-NNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGSKPPISDKVLAKAFQVEKGTID 212          
BLAST of EY702485 vs. ExPASy Swiss-Prot
Match: GL810_ORYSJ (Germin-like protein 8-10 OS=Oryza sativa subsp. japonica GN=GLP2 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.081e-48
Identity = 106/193 (54.92%), Postives = 128/193 (66.32%), Query Frame = 1
Query:   94 TDPGHLQGGWGAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIADTVFGGNPSINPDFLGKAFQLDPKIVE 669
            +DP  LQ     + D    V VNG  C DPK   A+ FF + +       N++G + T  NV QIPGLNTLGIS  RIDYAP G+ PPH HPRA+EI  VLEGTLYVGFVTS+  NNTL +KVLNKGDVFVFP+GLIHFQFN      A A +AL+SQ PG +TIA+ VFG  P I+   L KAFQ++   ++
Sbjct:   23 SDPSPLQDF--CVADMHSPVLVNGFACLDPKYVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNP-NNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGSKPPISDIVLAKAFQVEKGTID 212          
BLAST of EY702485 vs. ExPASy Swiss-Prot
Match: GL121_ORYSJ (Germin-like protein 12-1 OS=Oryza sativa subsp. japonica GN=Os12g0154700 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 5.256e-48
Identity = 111/196 (56.63%), Postives = 129/196 (65.82%), Query Frame = 1
Query:   97 DPGHLQGGWGAINDPKDGVFVNGKFCKDPKLARAEDFFF-SGLGKPGNTA-NRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLN--NTLIAKVLNKGDVFVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIADTVFGGNPSINPDFLGKAFQLDPKIVE 669
            DP  LQ     + D    V VNG  CKD K    +DFF  + L KP +T  ++ G + T  NV ++ GLNTLGIS  RIDYAP GQ PPH HPRA+EI  V EGTLYVGFVTS+Q N  N L  K LNKGDVFVFPQGLIHFQFN      A A +AL+SQ PG +TIA+ VFG NP I+ D L KAFQ+D K V+
Sbjct:   24 DPSPLQDF--CVADRNSPVRVNGFPCKDAKDVNVDDFFLEANLDKPMDTTKSKAGSNVTLINVMKLTGLNTLGISMARIDYAPKGQNPPHTHPRATEILTVFEGTLYVGFVTSNQANGENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKPAVAIAALSSQNPGAITIANAVFGSNPPISDDVLAKAFQVDKKAVD 217          
The following BLAST results are available for this feature:
BLAST of EY702485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL15_ARATH2.693e-5256.45Germin-like protein subfamily 1 member 5 OS=Arabid... [more]
GLP1_MESCR1.023e-5159.30Germin-like protein OS=Mesembryanthemum crystallin... [more]
GL14_ARATH1.337e-5155.91Germin-like protein subfamily 1 member 4 OS=Arabid... [more]
GL82_ORYSJ2.280e-5157.73Germin-like protein 8-2 OS=Oryza sativa subsp. jap... [more]
GL81_ORYSJ1.251e-4959.02Putative germin-like protein 8-1 OS=Oryza sativa s... [more]
GL87_ORYSJ1.634e-4955.44Germin-like protein 8-7 OS=Oryza sativa subsp. jap... [more]
GL41_ORYSJ6.209e-4954.23Germin-like protein 4-1 OS=Oryza sativa subsp. jap... [more]
GL88_ORYSJ1.806e-4854.92Germin-like protein 8-8 OS=Oryza sativa subsp. jap... [more]
GL810_ORYSJ3.081e-4854.92Germin-like protein 8-10 OS=Oryza sativa subsp. ja... [more]
GL121_ORYSJ5.256e-4856.63Germin-like protein 12-1 OS=Oryza sativa subsp. ja... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-E08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702485 ID=EY702485; Name=EY702485; organism=Citrus sinensis; type=EST; length=837bp
ATAAGGTACTCCTGTGACTTAATCACCATGAAGGTAATTCAATTTCTTAT
AGGGTTTGCCCTCTTGGCTTTGGCTTCTTCTTTGGCCTCTGCCACTGACC
CTGGCCATCTTCAGGGTGGGTGGGGAGCCATCAATGACCCCAAGGATGGT
GTGTTTGTGAATGGGAAGTTCTGCAAGGACCCCAAGCTTGCGAGAGCAGA
AGATTTCTTCTTCTCAGGGCTAGGCAAGCCTGGAAACACAGCAAATCGAC
TTGGTGTTGATGAAACAGATGCAAATGTTGAGCAAATTCCAGGACTCAAC
ACCCTTGGCATATCAGCATTCCGTATTGACTATGCACCATATGGCCAAAG
GCCACCTCACATTCACCCCCGTGCCAGCGAAATCTTCTTAGTCCTGGAAG
GAACTCTTTATGTCGGTTTTGTGACATCAGACCAACTGAATAACACACTC
ATCGCAAAAGTTCTAAATAAGGGAGATGTTTTTGTGTTTCCACAAGGTTT
GATTCACTTCCAATTCAACATTGGAAAAACAAATGCAGCTGCCTATTCTG
CTCTAAACAGCCAATTCCCGGGTGAAGTTACCATAGCCGACACAGTCTTT
GGAGGCAATCCTTCAATCAATCCCGATTTTCTTGGCAAGGCATTCCAGTT
GGACCCCAAGATAGTGGAAGATCCTTCAAATAAGTTCCTTATGGGAATTA
CGAGAAGGAATTATGAGCTTTATATTAATGGCCTCTCACTAGGGGGTGGA
TTACTTTATCTCCCCATTATCAATCCTAATAAATGGAATAAAGAGGTCTC
TCTGAACCCCCCCCAGGCTGACTGTGGCATGAATAAA
back to top