EY702481
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702481 vs. ExPASy Swiss-Prot
Match: SPD1_HYONI (Spermidine synthase 1 OS=Hyoscyamus niger PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.065e-28 Identity = 83/186 (44.62%), Postives = 104/186 (55.91%), Query Frame = 2 Query: 362 EANNNNNGSVLMEMDSNKQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSHMGRFLFWMG*FSLLRGMNVHXQK*SLTFHFGPFPTRRKVWVXXXXXXXXXXXSISSFFLWRRLISGELDKMGVDVSKQFFP*WTWWGLRNLRVTLQMGEGVAVLEAGS*GTIDAVLGD 919 E N +NG ++ K+ ISSV+PGWFSEISP+WPGEAHSLKVEKILFQGKSDYQNVMVFQSS G+ L G L Q+ P +KV V +S ++ E+DKM V+V+K+FFP G + RV L +G+GVA L+ GT DAV+ D Sbjct: 2 EVTNQSNGC----SNNEKESPYISSVLPGWFSEISPLWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLV-IGGGDGGVLREVSRHSSVEQIDICEIDKMVVEVAKEFFP-DVAVGYEDPRVNLHIGDGVAFLKNVPAGTYDAVIVD 181
BLAST of EY702481 vs. ExPASy Swiss-Prot
Match: SPD1_ORYSJ (Spermidine synthase 1 OS=Oryza sativa subsp. japonica GN=SPDSYN1 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.904e-28 Identity = 79/164 (48.17%), Postives = 95/164 (57.93%), Query Frame = 2 Query: 428 ISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSHMGRFLFWMG*FSLLRGMNVHXQK*SLTFHFGPFPTRRKVWVXXXXXXXXXXXSISSFFLWRRLISGELDKMGVDVSKQFFP*WTWWGLRNLRVTLQMGEGVAVLEAGS*GTIDAVLGD 919 IS+VIPGWFSEISPMWPGEAHSLKVEK+LFQGKSDYQNVMVFQSS G+ L G + Q+ +KV V +S ++ E+DKM VDVSKQFFP G + RV+L +G+GVA L+ GT DAV+ D Sbjct: 27 ISAVIPGWFSEISPMWPGEAHSLKVEKVLFQGKSDYQNVMVFQSSTYGKVLVLDGVIQVTERDECAYQEMITHLPLCSIKDPKKVLV-IGGGDGGVLREVSRHSSVEQIDICEIDKMVVDVSKQFFP-HLAVGFEDPRVSLHIGDGVAFLKNAPEGTYDAVIVD 188
BLAST of EY702481 vs. ExPASy Swiss-Prot
Match: PMT1_TOBAC (Putrescine N-methyltransferase 1 OS=Nicotiana tabacum GN=PMT1 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.821e-20 Identity = 62/190 (32.63%), Postives = 96/190 (50.53%), Query Frame = 2 Query: 350 DGEKEANNNNNGSVLMEMDSNKQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSHMGRFLFWMG*FSLLRGMNVHXQK*SLTFHFGPFPTRRKVWVXXXXXXXXXXXSISSFFLWRRLISGELDKMGVDVSKQFFP*WTWWGLRNLRVTLQMGEGVAVLEAGS*GTIDAVLGD 919 +G + + + + N+ S+ PGWFSE S +WPGEA SLKVEK+LFQGKSDYQ+VM+F+S+ G+ L G + + G P +KV + + + ++ E+D + VDVS++FFP + + RVTL +G+G A ++A G DA++ D Sbjct: 55 NGHQNGTSEQQNGTISHDNGNELLGSSDSIKPGWFSEFSALWPGEAFSLKVEKLLFQGKSDYQDVMLFESATYGKVLTLDGAIQHTENGGFPYTEMIVHLPLGSIPNPKKVLIIGGGIGFTLFEML-RYPSIEKIDIVEIDDVVVDVSRKFFP-YLAANFNDPRVTLVLGDGAAFVKAAQAGYYDAIIVD 242
BLAST of EY702481 vs. ExPASy Swiss-Prot
Match: PMT3_TOBAC (Putrescine N-methyltransferase 3 OS=Nicotiana tabacum GN=PMT3 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.378e-20 Identity = 64/183 (34.97%), Postives = 99/183 (54.10%), Query Frame = 2 Query: 371 NNNNGSVLMEMDSNKQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSHMGRFLFWMG*FSLLRGMNVHXQK*SLTFHFGPFPTRRKVWVXXXXXXXXXXXSISSFFLWRRLISGELDKMGVDVSKQFFP*WTWWGLRNLRVTLQMGEGVAVLEAGS*GTIDAVLGD 919 +++NG+ L + S+ +S+ PGWFSE S +WPGEA SLKVEK+LFQGKSDYQ+VM+F+S+ G+ L G + + G P +KV + + + ++ E+D + VDVS++FFP + + RVTL +G+G A ++A G DA++ D Sbjct: 74 SHDNGNELQLLGSS------NSIKPGWFSEFSALWPGEAFSLKVEKLLFQGKSDYQDVMLFESATYGKVLTLDGAIQHTENGGFPYTEMIVHLPLGSIPNPKKVLIIGGGIGFTLFEML-RYPTIEKIDIVEIDDVVVDVSRKFFP-YLAANFSDPRVTLVLGDGAAFVKAAQAGYYDAIIVD 248
BLAST of EY702481 vs. ExPASy Swiss-Prot
Match: SPEE_YEAST (Spermidine synthase OS=Saccharomyces cerevisiae GN=SPE3 PE=1 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 2.574e-20 Identity = 32/44 (72.73%), Postives = 33/44 (75.00%), Query Frame = 1 Query: 562 TYGKVLILDGVIQLTERDECAYXEMITHLPLWSIPNPKKGLGIG 693 TYG VL+LD VIQ TERDE AY EMI HL L S PNPKK L IG Sbjct: 53 TYGNVLVLDNVIQATERDEFAYQEMIAHLALNSHPNPKKVLVIG 96 HSP 2 Score: 57.3806 bits (137), Expect = 2.574e-20 Identity = 26/50 (52.00%), Postives = 37/50 (74.00%), Query Frame = 2 Query: 434 SVIPGWFSEISP-MWPGEAHSLKVEKILFQGKSDYQNVMVFQSSHMGRFL 580 +++ GWF EIS MWPG+A +LKVEK+L KS YQ+V++F+S+ G L Sbjct: 9 TIVDGWFREISDTMWPGQAMTLKVEKVLHHEKSKYQDVLIFKSTTYGNVL 58 HSP 3 Score: 20.7866 bits (42), Expect = 2.574e-20 Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 3 Query: 708 GVLREVSRHSSCGE 749 GVLREV +H S E Sbjct: 101 GVLREVVKHDSVEE 114
BLAST of EY702481 vs. ExPASy Swiss-Prot
Match: PMT2_TOBAC (Putrescine N-methyltransferase 2 OS=Nicotiana tabacum GN=PMT2 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.434e-19 Identity = 66/207 (31.88%), Postives = 103/207 (49.76%), Query Frame = 2 Query: 326 LPLKRPRDDGEKEANNNNNGSV-----LMEMDSNKQ----PDCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSHMGRFLFWMG*FSLLRGMNVHXQK*SLTFHFGPFPTRRKVWVXXXXXXXXXXXSISSFFLWRRLISGELDKMGVDVSKQFFP*WTWWGLRNLRVTLQMGEGVAVLEAGS*GTIDAVLGD 919 +P+ + K N + NG+ + +D+ + +CI PGWFSE S +WPGEA SLKVEK+LFQGKSDYQ+VM+F+S+ G+ L G + + G P +KV + + + ++ E+D + VDVS++FFP + + RVTL +G+G A ++A DA++ D Sbjct: 19 IPMNGHHNGTSKHQNGHKNGTSEQQNGTISLDNGNELLGNSNCIK---PGWFSEFSALWPGEAFSLKVEKLLFQGKSDYQDVMLFESATYGKVLTLDGAIQHTENGGFPYTEMIVHLPLGSIPNPKKVLIIGGGIGFTLFEML-RYPTIEKIDIVEIDDVVVDVSRKFFP-YLAANFNDPRVTLVLGDGAAFVKAAQAEYYDAIIVD 220
BLAST of EY702481 vs. ExPASy Swiss-Prot
Match: PMT4_TOBAC (Putrescine N-methyltransferase 4 OS=Nicotiana tabacum GN=PMT4 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.226e-18 Identity = 60/190 (31.58%), Postives = 95/190 (50.00%), Query Frame = 2 Query: 350 DGEKEANNNNNGSVLMEMDSNKQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSHMGRFLFWMG*FSLLRGMNVHXQK*SLTFHFGPFPTRRKVWVXXXXXXXXXXXSISSFFLWRRLISGELDKMGVDVSKQFFP*WTWWGLRNLRVTLQMGEGVAVLEAGS*GTIDAVLGD 919 +G + + + + N+ +S+ GWFSE S +WPGEA SLKVEK+LFQGKSDYQ+VM+F+S+ G+ L G + + G P +KV + + + ++ E+D + VDVS++ FP + + RVTL +G+G A ++A G DA++ D Sbjct: 99 NGHQNGTSEQQNGTISHDNGNELLGNSNSIKLGWFSEFSALWPGEAFSLKVEKLLFQGKSDYQDVMLFESATYGKVLTLDGAIQHTENGGFPYTEMIVHLPLGSIPNPKKVLIIGGGIGFTLFEML-RYPTIEKIDIVEIDDVVVDVSRKSFP-YLAANFNDPRVTLVLGDGAAFVKAAQAGYYDAIIVD 286 The following BLAST results are available for this feature:
BLAST of EY702481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY702481 ID=EY702481; Name=EY702481; organism=Citrus sinensis; type=EST; length=920bpback to top |