EY702476

Overview
NameEY702476
Unique NameEY702476
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length570
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702476 vs. ExPASy Swiss-Prot
Match: G3P_PHANO (Glyceraldehyde-3-phosphate dehydrogenase OS=Phaeosphaeria nodorum GN=GPD1 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.870e-14
Identity = 35/46 (76.09%), Postives = 43/46 (93.48%), Query Frame = 2
Query:    8 GDSRSSIFDAKAGIALSKKVVKLVSWYDNEWGYSTRVVDLIVHMSK 145
            GD+RSSIFDAKAGI+L+K  VKLVSWYDNEWGYS RV+DL+V+++K
Sbjct:  287 GDTRSSIFDAKAGISLNKNFVKLVSWYDNEWGYSRRVLDLLVYIAK 332          
BLAST of EY702476 vs. ExPASy Swiss-Prot
Match: G3P_PANVR (Glyceraldehyde-3-phosphate dehydrogenase OS=Panulirus versicolor PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.870e-14
Identity = 37/48 (77.08%), Postives = 41/48 (85.42%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKVVKLVSWYDNEWGYSTRVVDLIVHMSK 145
            F GD+RSSIFDAKAGI LSK  VK+VSWYDNE+GYS RV+DLI HM K
Sbjct:  282 FTGDNRSSIFDAKAGIQLSKTFVKVVSWYDNEFGYSQRVIDLIKHMQK 329          
BLAST of EY702476 vs. ExPASy Swiss-Prot
Match: G3P_CURLU (Glyceraldehyde-3-phosphate dehydrogenase OS=Curvularia lunata GN=GPD PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.870e-14
Identity = 35/46 (76.09%), Postives = 43/46 (93.48%), Query Frame = 2
Query:    8 GDSRSSIFDAKAGIALSKKVVKLVSWYDNEWGYSTRVVDLIVHMSK 145
            GD+RSSIFDAKAGI+L+K  VKLVSWYDNEWGYS RV+DL+V+++K
Sbjct:  287 GDNRSSIFDAKAGISLNKNFVKLVSWYDNEWGYSRRVLDLLVYIAK 332          
BLAST of EY702476 vs. ExPASy Swiss-Prot
Match: G3P_COCHE (Glyceraldehyde-3-phosphate dehydrogenase OS=Cochliobolus heterostrophus GN=GPD1 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.870e-14
Identity = 35/46 (76.09%), Postives = 43/46 (93.48%), Query Frame = 2
Query:    8 GDSRSSIFDAKAGIALSKKVVKLVSWYDNEWGYSTRVVDLIVHMSK 145
            GD+RSSIFDAKAGI+L+K  VKLVSWYDNEWGYS RV+DL+V+++K
Sbjct:  287 GDNRSSIFDAKAGISLNKNFVKLVSWYDNEWGYSRRVLDLLVYIAK 332          
BLAST of EY702476 vs. ExPASy Swiss-Prot
Match: G3P2_YEAST (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Saccharomyces cerevisiae GN=TDH2 PE=1 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 1.870e-14
Identity = 37/48 (77.08%), Postives = 42/48 (87.50%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKVVKLVSWYDNEWGYSTRVVDLIVHMSK 145
            F+GDS SSIFDA AGI LS K VKLVSWYDNE+GYSTRVVDL+ H++K
Sbjct:  284 FLGDSNSSIFDAAAGIQLSPKFVKLVSWYDNEYGYSTRVVDLVEHVAK 331          
BLAST of EY702476 vs. ExPASy Swiss-Prot
Match: G3P_MASBA (Glyceraldehyde-3-phosphate dehydrogenase OS=Mastigamoeba balamuthi GN=GAPD PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.442e-14
Identity = 36/45 (80.00%), Postives = 39/45 (86.67%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKVVKLVSWYDNEWGYSTRVVDLIVH 136
            FVG+  SSIFDAKAGIAL K  VKLVSWYDNEWGYS RVVDL++H
Sbjct:  290 FVGEPMSSIFDAKAGIALDKTFVKLVSWYDNEWGYSNRVVDLLLH 334          
BLAST of EY702476 vs. ExPASy Swiss-Prot
Match: G3P_ASPOR (Glyceraldehyde-3-phosphate dehydrogenase OS=Aspergillus oryzae GN=gpdA PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.442e-14
Identity = 35/47 (74.47%), Postives = 42/47 (89.36%), Query Frame = 2
Query:    5 VGDSRSSIFDAKAGIALSKKVVKLVSWYDNEWGYSTRVVDLIVHMSK 145
            +GD+ SSIFDAKAGIAL++  +KLVSWYDNEWGYS RVVDLI ++SK
Sbjct:  288 IGDAHSSIFDAKAGIALNEHFIKLVSWYDNEWGYSRRVVDLIAYISK 334          
BLAST of EY702476 vs. ExPASy Swiss-Prot
Match: G3P_TRISI (Glyceraldehyde-3-phosphate dehydrogenase OS=Trionyx sinensis GN=GAPDH PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.166e-14
Identity = 37/50 (74.00%), Postives = 42/50 (84.00%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKVVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 151
            F GDSRSSIFDA AGIAL+   VKLVSWYDNE+GYS RVVDL+VHM+  +
Sbjct:  284 FNGDSRSSIFDAAAGIALNDNFVKLVSWYDNEFGYSNRVVDLLVHMASKE 333          
BLAST of EY702476 vs. ExPASy Swiss-Prot
Match: G3P_ASPNG (Glyceraldehyde-3-phosphate dehydrogenase OS=Aspergillus niger GN=gpdA PE=3 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 5.441e-14
Identity = 36/46 (78.26%), Postives = 39/46 (84.78%), Query Frame = 2
Query:    8 GDSRSSIFDAKAGIALSKKVVKLVSWYDNEWGYSTRVVDLIVHMSK 145
            GD  SSIFDAKAGIAL+   VKLVSWYDNEWGYS RVVDLI ++SK
Sbjct:  287 GDDHSSIFDAKAGIALNSNFVKLVSWYDNEWGYSRRVVDLIAYISK 332          
BLAST of EY702476 vs. ExPASy Swiss-Prot
Match: G3P_DICDI (Glyceraldehyde-3-phosphate dehydrogenase OS=Dictyostelium discoideum GN=gpdA PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 9.281e-14
Identity = 35/48 (72.92%), Postives = 42/48 (87.50%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKVVKLVSWYDNEWGYSTRVVDLIVHMSK 145
            F+GD+ SSIFDA AGIAL+   VKLVSWYDNE GYSTRV+DL+V++SK
Sbjct:  286 FIGDTHSSIFDAHAGIALNDNFVKLVSWYDNEMGYSTRVIDLLVYISK 333          
The following BLAST results are available for this feature:
BLAST of EY702476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
G3P_PHANO1.870e-1476.09Glyceraldehyde-3-phosphate dehydrogenase OS=Phaeos... [more]
G3P_PANVR1.870e-1477.08Glyceraldehyde-3-phosphate dehydrogenase OS=Panuli... [more]
G3P_CURLU1.870e-1476.09Glyceraldehyde-3-phosphate dehydrogenase OS=Curvul... [more]
G3P_COCHE1.870e-1476.09Glyceraldehyde-3-phosphate dehydrogenase OS=Cochli... [more]
G3P2_YEAST1.870e-1477.08Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Sacc... [more]
G3P_MASBA2.442e-1480.00Glyceraldehyde-3-phosphate dehydrogenase OS=Mastig... [more]
G3P_ASPOR2.442e-1474.47Glyceraldehyde-3-phosphate dehydrogenase OS=Asperg... [more]
G3P_TRISI4.166e-1474.00Glyceraldehyde-3-phosphate dehydrogenase OS=Triony... [more]
G3P_ASPNG5.441e-1478.26Glyceraldehyde-3-phosphate dehydrogenase OS=Asperg... [more]
G3P_DICDI9.281e-1472.92Glyceraldehyde-3-phosphate dehydrogenase OS=Dictyo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-D08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702476 ID=EY702476; Name=EY702476; organism=Citrus sinensis; type=EST; length=570bp
CTTTGTTGGTGACAGTAGGTCAAGTATCTTTGATGCCAAGGCTGGTATTG
CTTTGAGTAAGAAAGTTGTGAAGCTTGTCTCATGGTATGACAATGAGTGG
GGCTACAGTACTCGTGTGGTGGATTTGATTGTCCACATGTCGAAGACCCA
GTAACTTACTCGGCGTGGCTTGAGTATGTAACACGCTTAGTTGTGCTAAG
TGTGGTGTTTCTTTGTGCTAAATGTGGTGTTTGTGTTTCTATGTAGAGGG
TCTGAGCTTAAATAAAATTGGTTCCCAGACATTATCCAGAGCCTTACCTG
CTCATGCAGGGGTGGTGCTTAGATTTTCCCCTGTAGTATGCAAGAAGAGT
TGGCGAACCAACTTATGTTTTGGTACCGAGAAAACCAATTGTCCATTGGA
AACTTGCTTTTATAATTTTTCCATCTAGTAAGTATCAAAGACCTGTTCCT
CCAGCTGGTAAAAAAAAAAAAAAAAGGGGCGGCCGCCCTACAAGATCCCA
CCTCTACGGAACCGGGCGATGCCACGCCCTAACCCCTCCACCGGGGGCCC
CTAAACCCAATCCCCTGGGC
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