EY702476

Overview
NameEY702476
Unique NameEY702476
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length570
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702476 vs. ExPASy Swiss-Prot
Match: G3P_ASHGO (Glyceraldehyde-3-phosphate dehydrogenase OS=Ashbya gossypii GN=GPD PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.212e-13
Identity = 35/47 (74.47%), Postives = 41/47 (87.23%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKVVKLVSWYDNEWGYSTRVVDLIVHMS 142
            F+GD+ SSIFDA AGI LS K VKLVSWYDNE+GYSTRVVDL+ H++
Sbjct:  283 FLGDNNSSIFDASAGIMLSPKFVKLVSWYDNEYGYSTRVVDLVEHVA 329          
BLAST of EY702476 vs. ExPASy Swiss-Prot
Match: G3P_AJECA (Glyceraldehyde-3-phosphate dehydrogenase OS=Ajellomyces capsulata GN=GPD PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.212e-13
Identity = 34/46 (73.91%), Postives = 40/46 (86.96%), Query Frame = 2
Query:    8 GDSRSSIFDAKAGIALSKKVVKLVSWYDNEWGYSTRVVDLIVHMSK 145
            GDSRSSIFDA AGIAL+   +KL+SWYDNEWGYS RVVDLI +++K
Sbjct:  287 GDSRSSIFDASAGIALNDHFIKLISWYDNEWGYSRRVVDLIAYIAK 332          
BLAST of EY702476 vs. ExPASy Swiss-Prot
Match: G3P_SCHMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.583e-13
Identity = 36/48 (75.00%), Postives = 40/48 (83.33%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKVVKLVSWYDNEWGYSTRVVDLIVHMSK 145
            FVG + SSIFDAKAGI+L+   VKLVSWYDNE+GYS RVVDLI HM K
Sbjct:  287 FVGSTSSSIFDAKAGISLNNNFVKLVSWYDNEFGYSCRVVDLITHMHK 334          
BLAST of EY702476 vs. ExPASy Swiss-Prot
Match: G3P_PICPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia pastoris GN=GPD PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.583e-13
Identity = 34/48 (70.83%), Postives = 41/48 (85.42%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKVVKLVSWYDNEWGYSTRVVDLIVHMSK 145
            F+GD RSSIFDA AGI L+   VKL+SWYDNE+GYSTRVVDL+ H++K
Sbjct:  285 FLGDERSSIFDASAGIQLTPSFVKLISWYDNEYGYSTRVVDLLQHVAK 332          
BLAST of EY702476 vs. ExPASy Swiss-Prot
Match: G3P_PICAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia angusta GN=GPD PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.583e-13
Identity = 35/48 (72.92%), Postives = 42/48 (87.50%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKVVKLVSWYDNEWGYSTRVVDLIVHMSK 145
            F+ DSRSS+FDAKAGI L+   VKLVSWYDNE+GYSTRVVDL+ H++K
Sbjct:  285 FLTDSRSSVFDAKAGILLTPTFVKLVSWYDNEYGYSTRVVDLLQHVAK 332          
BLAST of EY702476 vs. ExPASy Swiss-Prot
Match: G3P_SCLSC (Glyceraldehyde-3-phosphate dehydrogenase OS=Sclerotinia sclerotiorum GN=GPD PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.068e-13
Identity = 34/46 (73.91%), Postives = 41/46 (89.13%), Query Frame = 2
Query:    8 GDSRSSIFDAKAGIALSKKVVKLVSWYDNEWGYSTRVVDLIVHMSK 145
            GD+ SSIFDAKAGI+L+K  VKLVSWYDNEWGYS RV+DL+ ++SK
Sbjct:  288 GDNHSSIFDAKAGISLNKNFVKLVSWYDNEWGYSRRVLDLLHYISK 333          
BLAST of EY702476 vs. ExPASy Swiss-Prot
Match: G3PC_CHOCR (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Chondrus crispus GN=GAPC PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.700e-13
Identity = 34/50 (68.00%), Postives = 38/50 (76.00%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKVVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 151
            F+ D  S IFDA AGI L+ K  KLV+WYDNEWGYS RVVDLI H+SK Q
Sbjct:  286 FIHDDASCIFDASAGIMLNSKFCKLVAWYDNEWGYSNRVVDLIAHISKVQ 335          
BLAST of EY702476 vs. ExPASy Swiss-Prot
Match: G3P_YARLI (Glyceraldehyde-3-phosphate dehydrogenase OS=Yarrowia lipolytica GN=GPD PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.527e-13
Identity = 34/48 (70.83%), Postives = 41/48 (85.42%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKVVKLVSWYDNEWGYSTRVVDLIVHMSK 145
            F+GD+ SSIFDAKAGI L+   VKL+SWYDNE+GYS RVVDLIV ++K
Sbjct:  286 FIGDTHSSIFDAKAGIGLNDNFVKLISWYDNEYGYSARVVDLIVAVAK 333          
BLAST of EY702476 vs. ExPASy Swiss-Prot
Match: G3P_PARBA (Glyceraldehyde-3-phosphate dehydrogenase OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=GPD PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.527e-13
Identity = 33/46 (71.74%), Postives = 40/46 (86.96%), Query Frame = 2
Query:    8 GDSRSSIFDAKAGIALSKKVVKLVSWYDNEWGYSTRVVDLIVHMSK 145
            GD RSSIFDA AGIAL+ + VKL+SWYDNEWGYS RV+DLI +++K
Sbjct:  288 GDPRSSIFDASAGIALNDRFVKLISWYDNEWGYSRRVLDLIAYIAK 333          
BLAST of EY702476 vs. ExPASy Swiss-Prot
Match: G3P_LENED (Glyceraldehyde-3-phosphate dehydrogenase OS=Lentinula edodes GN=gpd PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.527e-13
Identity = 33/48 (68.75%), Postives = 40/48 (83.33%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKVVKLVSWYDNEWGYSTRVVDLIVHMSK 145
            F+GD+ SSIFDA AGI L+K  VKL++WYDNEWGYS RVVDL+V  +K
Sbjct:  285 FIGDNHSSIFDATAGIQLNKNFVKLIAWYDNEWGYSGRVVDLLVFAAK 332          
The following BLAST results are available for this feature:
BLAST of EY702476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
G3P_ASHGO1.212e-1374.47Glyceraldehyde-3-phosphate dehydrogenase OS=Ashbya... [more]
G3P_AJECA1.212e-1373.91Glyceraldehyde-3-phosphate dehydrogenase OS=Ajello... [more]
G3P_SCHMA1.583e-1375.00Glyceraldehyde-3-phosphate dehydrogenase OS=Schist... [more]
G3P_PICPA1.583e-1370.83Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia... [more]
G3P_PICAN1.583e-1372.92Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia... [more]
G3P_SCLSC2.068e-1373.91Glyceraldehyde-3-phosphate dehydrogenase OS=Sclero... [more]
G3PC_CHOCR2.700e-1368.00Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_YARLI3.527e-1370.83Glyceraldehyde-3-phosphate dehydrogenase OS=Yarrow... [more]
G3P_PARBA3.527e-1371.74Glyceraldehyde-3-phosphate dehydrogenase OS=Paraco... [more]
G3P_LENED3.527e-1368.75Glyceraldehyde-3-phosphate dehydrogenase OS=Lentin... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-D08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702476 ID=EY702476; Name=EY702476; organism=Citrus sinensis; type=EST; length=570bp
CTTTGTTGGTGACAGTAGGTCAAGTATCTTTGATGCCAAGGCTGGTATTG
CTTTGAGTAAGAAAGTTGTGAAGCTTGTCTCATGGTATGACAATGAGTGG
GGCTACAGTACTCGTGTGGTGGATTTGATTGTCCACATGTCGAAGACCCA
GTAACTTACTCGGCGTGGCTTGAGTATGTAACACGCTTAGTTGTGCTAAG
TGTGGTGTTTCTTTGTGCTAAATGTGGTGTTTGTGTTTCTATGTAGAGGG
TCTGAGCTTAAATAAAATTGGTTCCCAGACATTATCCAGAGCCTTACCTG
CTCATGCAGGGGTGGTGCTTAGATTTTCCCCTGTAGTATGCAAGAAGAGT
TGGCGAACCAACTTATGTTTTGGTACCGAGAAAACCAATTGTCCATTGGA
AACTTGCTTTTATAATTTTTCCATCTAGTAAGTATCAAAGACCTGTTCCT
CCAGCTGGTAAAAAAAAAAAAAAAAGGGGCGGCCGCCCTACAAGATCCCA
CCTCTACGGAACCGGGCGATGCCACGCCCTAACCCCTCCACCGGGGGCCC
CTAAACCCAATCCCCTGGGC
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