EY702476

Overview
NameEY702476
Unique NameEY702476
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length570
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702476 vs. ExPASy Swiss-Prot
Match: G3P2_RHIRA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Rhizomucor racemosus GN=GPD2 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.527e-13
Identity = 34/48 (70.83%), Postives = 42/48 (87.50%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKVVKLVSWYDNEWGYSTRVVDLIVHMSK 145
            FVGD++SSIFDA AGIAL+ K VKLVSWYDNE+GYS RV+DL+ + +K
Sbjct:  285 FVGDAQSSIFDAAAGIALNDKFVKLVSWYDNEFGYSNRVIDLLAYAAK 332          
BLAST of EY702476 vs. ExPASy Swiss-Prot
Match: G3P_COLLN (Glyceraldehyde-3-phosphate dehydrogenase OS=Colletotrichum lindemuthianum GN=GPDA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.606e-13
Identity = 32/47 (68.09%), Postives = 40/47 (85.11%), Query Frame = 2
Query:    5 VGDSRSSIFDAKAGIALSKKVVKLVSWYDNEWGYSTRVVDLIVHMSK 145
            +G+  SSIFDAKAGI+L+   VKLVSWYDNEWGYS RV+DL+ H++K
Sbjct:  286 IGNPNSSIFDAKAGISLNNNFVKLVSWYDNEWGYSRRVLDLLAHVAK 332          
BLAST of EY702476 vs. ExPASy Swiss-Prot
Match: G3P_COLGL (Glyceraldehyde-3-phosphate dehydrogenase OS=Colletotrichum gloeosporioides GN=GPDA PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.606e-13
Identity = 32/47 (68.09%), Postives = 40/47 (85.11%), Query Frame = 2
Query:    5 VGDSRSSIFDAKAGIALSKKVVKLVSWYDNEWGYSTRVVDLIVHMSK 145
            +G+  SSIFDAKAGI+L+   VKLVSWYDNEWGYS RV+DL+ H++K
Sbjct:  287 IGNPNSSIFDAKAGISLNNNFVKLVSWYDNEWGYSRRVLDLLAHVAK 333          
BLAST of EY702476 vs. ExPASy Swiss-Prot
Match: G3PT_MACFA (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Macaca fascicularis GN=GAPDHS PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.606e-13
Identity = 35/46 (76.09%), Postives = 40/46 (86.96%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKVVKLVSWYDNEWGYSTRVVDLIVHM 139
            FVGDS SSIFDAKAGIAL+   VKL+SWYDNE+GYS RVVDL+ +M
Sbjct:  359 FVGDSHSSIFDAKAGIALNDNFVKLISWYDNEYGYSHRVVDLLRYM 404          
BLAST of EY702476 vs. ExPASy Swiss-Prot
Match: G3P3_RHIRA (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Rhizomucor racemosus GN=GPD3 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.606e-13
Identity = 34/47 (72.34%), Postives = 41/47 (87.23%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKVVKLVSWYDNEWGYSTRVVDLIVHMS 142
            FVGD+ SSIFDAKAGI LS   VKL+SWYDNE+GYSTRVVDL+ +++
Sbjct:  287 FVGDAHSSIFDAKAGIQLSPTFVKLISWYDNEFGYSTRVVDLLAYVA 333          
BLAST of EY702476 vs. ExPASy Swiss-Prot
Match: G3P2_TRIKO (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Trichoderma koningii GN=gpd2 PE=1 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 4.606e-13
Identity = 32/47 (68.09%), Postives = 41/47 (87.23%), Query Frame = 2
Query:    5 VGDSRSSIFDAKAGIALSKKVVKLVSWYDNEWGYSTRVVDLIVHMSK 145
            +G++ SSIFD KAGI+L+K  VKLVSWYDNEWGYS RV+DL+ H++K
Sbjct:  287 LGNTNSSIFDIKAGISLNKNFVKLVSWYDNEWGYSRRVLDLLAHVAK 333          
BLAST of EY702476 vs. ExPASy Swiss-Prot
Match: G3P_MONAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Monascus anka GN=GPD1 PE=3 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 6.016e-13
Identity = 33/46 (71.74%), Postives = 39/46 (84.78%), Query Frame = 2
Query:    8 GDSRSSIFDAKAGIALSKKVVKLVSWYDNEWGYSTRVVDLIVHMSK 145
            GD  SSIFDAKAGIAL+   VKLVSWYDNEWGYS RV+DLI ++++
Sbjct:  288 GDPHSSIFDAKAGIALNSNFVKLVSWYDNEWGYSRRVIDLIAYIAQ 333          
BLAST of EY702476 vs. ExPASy Swiss-Prot
Match: G3P_GLOMM (Glyceraldehyde-3-phosphate dehydrogenase OS=Glossina morsitans morsitans GN=Gapdh PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.016e-13
Identity = 33/46 (71.74%), Postives = 40/46 (86.96%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKVVKLVSWYDNEWGYSTRVVDLIVHM 139
            FVGD+ SS+FDAKAGI L+ K VKL+SWYDNE+GYS RV+DLI +M
Sbjct:  283 FVGDTHSSVFDAKAGIPLNDKFVKLISWYDNEFGYSNRVIDLIKYM 328          
BLAST of EY702476 vs. ExPASy Swiss-Prot
Match: G3P_SCHCO (Glyceraldehyde-3-phosphate dehydrogenase OS=Schizophyllum commune GN=GPD PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.857e-13
Identity = 32/48 (66.67%), Postives = 40/48 (83.33%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKVVKLVSWYDNEWGYSTRVVDLIVHMSK 145
            F G + SSIFD+KAGIA+SK  VKL++WYDNEWGYS RV DL+V+ +K
Sbjct:  285 FTGANESSIFDSKAGIAISKSFVKLIAWYDNEWGYSRRVCDLLVYAAK 332          
BLAST of EY702476 vs. ExPASy Swiss-Prot
Match: G3P_NEUCR (Glyceraldehyde 3-phosphate-dehydrogenase OS=Neurospora crassa GN=gpd-1 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 7.857e-13
Identity = 34/46 (73.91%), Postives = 40/46 (86.96%), Query Frame = 2
Query:    8 GDSRSSIFDAKAGIALSKKVVKLVSWYDNEWGYSTRVVDLIVHMSK 145
            G+  SSIFDAKAGI+L+K  VKLVSWYDNEWGYS RV+DLI ++SK
Sbjct:  287 GNPASSIFDAKAGISLNKNFVKLVSWYDNEWGYSRRVLDLISYISK 332          
The following BLAST results are available for this feature:
BLAST of EY702476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
G3P2_RHIRA3.527e-1370.83Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Rhiz... [more]
G3P_COLLN4.606e-1368.09Glyceraldehyde-3-phosphate dehydrogenase OS=Collet... [more]
G3P_COLGL4.606e-1368.09Glyceraldehyde-3-phosphate dehydrogenase OS=Collet... [more]
G3PT_MACFA4.606e-1376.09Glyceraldehyde-3-phosphate dehydrogenase, testis-s... [more]
G3P3_RHIRA4.606e-1372.34Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Rhiz... [more]
G3P2_TRIKO4.606e-1368.09Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Tric... [more]
G3P_MONAN6.016e-1371.74Glyceraldehyde-3-phosphate dehydrogenase OS=Monasc... [more]
G3P_GLOMM6.016e-1371.74Glyceraldehyde-3-phosphate dehydrogenase OS=Glossi... [more]
G3P_SCHCO7.857e-1366.67Glyceraldehyde-3-phosphate dehydrogenase OS=Schizo... [more]
G3P_NEUCR7.857e-1373.91Glyceraldehyde 3-phosphate-dehydrogenase OS=Neuros... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-D08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702476 ID=EY702476; Name=EY702476; organism=Citrus sinensis; type=EST; length=570bp
CTTTGTTGGTGACAGTAGGTCAAGTATCTTTGATGCCAAGGCTGGTATTG
CTTTGAGTAAGAAAGTTGTGAAGCTTGTCTCATGGTATGACAATGAGTGG
GGCTACAGTACTCGTGTGGTGGATTTGATTGTCCACATGTCGAAGACCCA
GTAACTTACTCGGCGTGGCTTGAGTATGTAACACGCTTAGTTGTGCTAAG
TGTGGTGTTTCTTTGTGCTAAATGTGGTGTTTGTGTTTCTATGTAGAGGG
TCTGAGCTTAAATAAAATTGGTTCCCAGACATTATCCAGAGCCTTACCTG
CTCATGCAGGGGTGGTGCTTAGATTTTCCCCTGTAGTATGCAAGAAGAGT
TGGCGAACCAACTTATGTTTTGGTACCGAGAAAACCAATTGTCCATTGGA
AACTTGCTTTTATAATTTTTCCATCTAGTAAGTATCAAAGACCTGTTCCT
CCAGCTGGTAAAAAAAAAAAAAAAAGGGGCGGCCGCCCTACAAGATCCCA
CCTCTACGGAACCGGGCGATGCCACGCCCTAACCCCTCCACCGGGGGCCC
CTAAACCCAATCCCCTGGGC
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