CX301067

Overview
NameCX301067
Unique NameCX301067
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_PROMP (Chaperone protein dnaJ OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.005e-20
Identity = 49/94 (52.13%), Postives = 66/94 (70.21%), Query Frame = -2
Query:  426 DPVLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELA 707
            D  LKR+G NI     VSY+ AILG T+ + TVDG V+LKIP+GTQPN+TL +  KGVP L     RG+  V V+V++P R++ +ER L+E+LA
Sbjct:  258 DSNLKREGINIYSEISVSYLQAILGDTVDIITVDGKVNLKIPSGTQPNSTLSLENKGVPRLGNPVARGNHQVLVKVKLPTRITEDERNLLEDLA 351          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_SYNJB (Chaperone protein dnaJ OS=Synechococcus sp. GN=dnaJ PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.843e-20
Identity = 55/118 (46.61%), Postives = 70/118 (59.32%), Query Frame = -2
Query:  381 VIPDPVLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGM------VDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELADLSKGKTASRR*LLG 716
            V PDP  +RDG  IL   +VSY+ AILG  + VPTVD        V+L IPAG+QP T L +  KGVP +     RGD  + + VEIP R+SSEER+L+  LA+L   +   R   LG
Sbjct:  259 VEPDPDFQRDGLTILSEVRVSYLQAILGAKVSVPTVDSKAGLEEEVELTIPAGSQPGTVLTLEGKGVPRIGNPMSRGDHQITLVVEIPTRISSEERELLMRLAELHGERINKRDGFLG 376          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_ANAVT (Chaperone protein dnaJ OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.024e-19
Identity = 48/101 (47.52%), Postives = 68/101 (67.33%), Query Frame = -2
Query:  405 DPVLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELADLSKGKT 707
            D   +RDG N++   KVSY+ AILG  ++V TVDG V+L IPAGTQPNT + +  +GVP L     RGD L+ V ++IP ++  EER+L+E+LA +   +T
Sbjct:  262 DEEFQRDGINVISEIKVSYLQAILGCRLEVNTVDGPVELIIPAGTQPNTVMKLENRGVPRLGNPVSRGDHLLTVLIDIPTKVIPEERELLEKLAKIKGDRT 362          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_ANASP (Chaperone protein dnaJ OS=Anabaena sp. (strain PCC 7120) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.024e-19
Identity = 48/101 (47.52%), Postives = 68/101 (67.33%), Query Frame = -2
Query:  405 DPVLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELADLSKGKT 707
            D   +RDG N++   KVSY+ AILG  ++V TVDG V+L IPAGTQPNT + +  +GVP L     RGD L+ V ++IP ++  EER+L+E+LA +   +T
Sbjct:  262 DEEFQRDGINVISEIKVSYLQAILGCRLEVNTVDGPVELIIPAGTQPNTVMKLENRGVPRLGNPVSRGDHLLTVLIDIPTKVIPEERELLEKLAKIKGDRT 362          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_ACAM1 (Chaperone protein dnaJ OS=Acaryochloris marina (strain MBIC 11017) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.024e-19
Identity = 48/101 (47.52%), Postives = 65/101 (64.36%), Query Frame = -2
Query:  405 DPVLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELADLSKGKT 707
            D   +RDGTN+L   K+SY+ AILG  + V TVDG   + IPAGTQP T L +   GVP L     RGD L+ V ++IP R+S+EER+L+ +LA +   +T
Sbjct:  259 DSEFRRDGTNVLSEFKISYLQAILGAQLPVKTVDGEETITIPAGTQPGTVLTLENHGVPRLGNPVSRGDHLITVIIDIPNRISTEERELLVQLASIRAEQT 359          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_TRIEI (Chaperone protein dnaJ OS=Trichodesmium erythraeum (strain IMS101) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.338e-19
Identity = 44/100 (44.00%), Postives = 68/100 (68.00%), Query Frame = -2
Query:  405 PVLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELADLSKGKT 704
            P  +RDG NI+   K+SY+ AILG  +++ TVDG  +L IP+GTQPN  L +  KGVP L  S  RG  L+ ++++IP +++ EE++L+E+LA +   +T
Sbjct:  259 PEFQRDGINIISQIKISYLQAILGCCLEINTVDGKTELTIPSGTQPNAILTLEDKGVPRLGNSVSRGAHLITIEIDIPTKITPEEKELLEKLAKIKGERT 358          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_SYNJA (Chaperone protein dnaJ OS=Synechococcus sp. (strain JA-3-3Ab) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.980e-19
Identity = 54/118 (45.76%), Postives = 69/118 (58.47%), Query Frame = -2
Query:  381 VIPDPVLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMV------DLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELADLSKGKTASRR*LLG 716
            V PDP  +RDG  I    +VSY+ AILG  + VPTVD         +L IPAG+QP T L +  KGVP L    +RGD  + + VEIP R+SSEER+L+  LA+L   +   R   LG
Sbjct:  259 VEPDPDFQRDGLTIFSQVRVSYLQAILGAKVLVPTVDSKAGLEEEAELTIPAGSQPGTVLTLEGKGVPRLGNPMLRGDHKITLVVEIPTRISSEERELLMRLAELHGERINKRDGFLG 376          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_THESQ (Chaperone protein dnaJ OS=Thermotoga sp. (strain RQ2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.892e-19
Identity = 50/98 (51.02%), Postives = 66/98 (67.35%), Query Frame = -2
Query:  426 VIPDPVLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVD-LKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELA 716
            V PDP  K+ G++++Y   + Y+ AILGTT++VP  +G    LKIP GTQP T   +  KG+P  N+   RGD +V V VEIPK LS EERK++EELA
Sbjct:  266 VKPDPRFKKSGSDLVYDITIDYLQAILGTTVEVPLPEGGTTMLKIPPGTQPETVFRLKGKGLP--NRYGRRGDLIVNVHVEIPKSLSREERKVLEELA 361          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_THEMA (Chaperone protein dnaJ OS=Thermotoga maritima GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.892e-19
Identity = 50/98 (51.02%), Postives = 66/98 (67.35%), Query Frame = -2
Query:  426 VIPDPVLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVD-LKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELA 716
            V PDP  K+ G++++Y   + Y+ AILGTT++VP  +G    LKIP GTQP T   +  KG+P  N+   RGD +V V VEIPK LS EERK++EELA
Sbjct:  266 VKPDPRFKKSGSDLVYDVTIDYLQAILGTTVEVPLPEGGTTMLKIPPGTQPETVFRLKGKGLP--NRYGRRGDLIVNVHVEIPKSLSREERKVLEELA 361          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_THEP1 (Chaperone protein dnaJ OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.671e-19
Identity = 49/98 (50.00%), Postives = 66/98 (67.35%), Query Frame = -2
Query:  426 VIPDPVLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVD-LKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELA 716
            V PDP  K+ G++++Y   + Y+ AILGTT++VP  +G    LKIP GTQP T   +  KG+P  N+   RGD +V V VEIPK LS EERK++E+LA
Sbjct:  266 VKPDPRFKKSGSDLVYDVTIDYLQAILGTTVEVPLPEGGTTMLKIPPGTQPETVFRLKGKGLP--NRYGRRGDLIVNVHVEIPKTLSREERKVLEDLA 361          
The following BLAST results are available for this feature:
BLAST of CX301067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 297
Match NameE-valueIdentityDescription
DNAJ_PROMP6.005e-2052.13Chaperone protein dnaJ OS=Prochlorococcus marinus ... [more]
DNAJ_SYNJB7.843e-2046.61Chaperone protein dnaJ OS=Synechococcus sp. GN=dna... [more]
DNAJ_ANAVT1.024e-1947.52Chaperone protein dnaJ OS=Anabaena variabilis (str... [more]
DNAJ_ANASP1.024e-1947.52Chaperone protein dnaJ OS=Anabaena sp. (strain PCC... [more]
DNAJ_ACAM11.024e-1947.52Chaperone protein dnaJ OS=Acaryochloris marina (st... [more]
DNAJ_TRIEI1.338e-1944.00Chaperone protein dnaJ OS=Trichodesmium erythraeum... [more]
DNAJ_SYNJA2.980e-1945.76Chaperone protein dnaJ OS=Synechococcus sp. (strai... [more]
DNAJ_THESQ3.892e-1951.02Chaperone protein dnaJ OS=Thermotoga sp. (strain R... [more]
DNAJ_THEMA3.892e-1951.02Chaperone protein dnaJ OS=Thermotoga maritima GN=d... [more]
DNAJ_THEP18.671e-1950.00Chaperone protein dnaJ OS=Thermotoga petrophila (s... [more]

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Properties
Property NameValue
Genbank descriptionC08005D05SK PhyRootSw1 Citrus sinensis cDNA clone C08005D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301067 ID=CX301067; Name=CX301067; organism=Citrus sinensis; type=EST; length=717bp
GAATTCGGCACGAGGTTTTTTTTTTTTTTTTGCAAAATTAAAGGATGGTA
TTATTGCACAAAATCTAGTCACACTCCAAAAAATAATTAATAGGTAACTT
ATGAAATCAAGTAGAAAACAAAATTAAAGAGGGATGCATCTCCCATTTCA
CCTCCATTAACCATTCTCAAAGATATCTTCTTGTGGTCAAAAGTATAGCA
ATGTAATTTCACCTACTACTACAGAAACTTGCTTACCCCATTTCCTCAGC
TCAGACACACTGAGAACTGTCAAATTCAGAAATCCCCTTATCATAAGCCA
TATAGACTCAGCAATGACCGCCATAGAATGAAGAATGTTTCTTCGGGGTG
AGCAACATAAATTTGATAAACATAAAAAGGCCCAAGCAACTATCTCCTGC
TTGCTGTCTTTCCCTTGCTCAGATCAGCAAGCTCCTCAATAAGTTTTCTC
TCTTCACTGCTCAATCTTTTCGGGATTTCAACTTGGACGCGTACCAACTG
ATCTCCTCTCATGTTGCTTTTATTTAGTACTGGTACCCCTTTCTTTGCCA
TAACAAGTGTTGTGTTCGGCTGGGTCCCAGCTGGGATCTTCAAATCAACC
ATGCCATCCACTGTTGGGACCTTTATGGTAGTCCCCAAAATTGCATCTAT
ATATGACACTTTGCAGGTATATAAAATGTTGGTACCATCACGTTTTAGCA
CAGGGTCTGGGATAACT
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