CX301067

Overview
NameCX301067
Unique NameCX301067
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_SYNP6 (Chaperone protein dnaJ OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.932e-18
Identity = 49/114 (42.98%), Postives = 73/114 (64.04%), Query Frame = -2
Query:  375 VIPDPVLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELADLSKGKTASRR*LLGPF 716
            V  D   +R+G N+  T  +SY+ AILG +++V TVDG  +L IP GTQPN  L +  KGVP L     RG+ LV ++VEIP ++S+EER+L+E++  + +G  A +  + G F
Sbjct:  258 VSEDTQFRREGINLFSTVTISYLQAILGCSLEVATVDGPTELIIPPGTQPNAVLTVEGKGVPRLGNPVARGNLLVTIKVEIPTKISAEERELLEKVVQI-RGDRAGKGGIEGFF 370          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_PROMA (Chaperone protein dnaJ OS=Prochlorococcus marinus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.295e-18
Identity = 45/91 (49.45%), Postives = 62/91 (68.13%), Query Frame = -2
Query:  426 LKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELA 698
            LKRDG NI     VSY+ AILG TI+V TVDG   L+IP+GTQP+  L++  KG+P L     RG+  + V ++IP RL+ +E+ L+E+LA
Sbjct:  261 LKRDGLNIHSEVNVSYLQAILGDTIEVDTVDGPTTLQIPSGTQPSAVLILDNKGIPKLGNPVARGNHCISVNIKIPSRLTDDEKILLEKLA 351          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_THETN (Chaperone protein dnaJ OS=Thermoanaerobacter tengcongensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.643e-17
Identity = 45/108 (41.67%), Postives = 64/108 (59.26%), Query Frame = -2
Query:  393 VIPDPVLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELADLSKGKTASRR 716
            V P  + KR+G ++     +S+ DA LG  IK+PT+DGMV   IP GTQ  T   +  KG+P +     RGDQ+V V VE+PKRLS ++++L+ E   L    TA  +
Sbjct:  265 VKPHEIFKREGYDVYVKIPISFADAALGGEIKIPTLDGMVSFTIPEGTQTGTKFKLRGKGIPHIG-GRGRGDQIVEVYVEVPKRLSEKQKELLREFKRLEGENTAEHK 371          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_THENN (Chaperone protein dnaJ OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.384e-16
Identity = 46/95 (48.42%), Postives = 61/95 (64.21%), Query Frame = -2
Query:  426 DPVLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVD-LKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELA 707
            D   KR G +++Y   + Y+ AILGTT+++P  +G    LKIP GTQP T   +  KG+P   +   RGD LV V VEIPK LS EERK++E+LA
Sbjct:  270 DSRFKRSGKDLIYDITIDYLQAILGTTVEIPLPEGGTTMLKIPPGTQPETVFRLKGKGLP--GEYGRRGDLLVNVHVEIPKNLSREERKVLEDLA 362          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_CYAP7 (Chaperone protein dnaJ OS=Cyanothece sp. (strain PCC 7424) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.808e-16
Identity = 48/115 (41.74%), Postives = 67/115 (58.26%), Query Frame = -2
Query:  372 DPVLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELADL---SKGKTASRR*LLGPFY 707
            D   +R+G +I     +SY+ AILG  + V TVDG  ++ I  GTQPNT L +  +GVP L     RGD L+ + V IP R++ EER+L+E+LA +   S GK      L G F+
Sbjct:  260 DEEFQREGIDIKSEISISYLQAILGCRLSVNTVDGPEEITIEPGTQPNTVLTLPNRGVPKLGNPVARGDHLITINVSIPTRVNPEERELLEKLAKIRGESHGKGGIEGFLGGLFH 374          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOD6 (Chaperone protein dnaJ OS=Clostridium difficile (strain 630) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.028e-16
Identity = 39/93 (41.94%), Postives = 62/93 (66.67%), Query Frame = -2
Query:  426 PVLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELA 704
            P+  RDG +I +   ++++ A LG  I+VPT+DG V   +P GTQ  T   + +KG+P + + N RGDQ V+V VEIPK+L+ ++++L+ E A
Sbjct:  268 PLFTRDGNDIYFEMPITFVQATLGDEIEVPTLDGKVKYSVPEGTQTGTVFRLKEKGIPRI-RGNSRGDQYVKVVVEIPKKLNDKQKELLREFA 359          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLTE (Chaperone protein dnaJ OS=Chlorobium tepidum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.028e-16
Identity = 44/94 (46.81%), Postives = 62/94 (65.96%), Query Frame = -2
Query:  429 PDPVLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEEL 710
            P  + KR+G +I+Y   V + D ++GT I+VPT+DG V L IPAGTQPNT L +  KG+  L +    GD  VRV V +PK +S ++R L++EL
Sbjct:  283 PHELFKRNGDDIIYDLSVGFPDLVMGTKIEVPTLDGHVKLTIPAGTQPNTMLRIGGKGIGHL-RGGGSGDLYVRVNVFVPKEVSGKDRDLLKEL 375          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOCE (Chaperone protein dnaJ OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.871e-16
Identity = 39/108 (36.11%), Postives = 66/108 (61.11%), Query Frame = -2
Query:  393 VIPDPVLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELADLSKGKTASRR 716
            V P P+  R G N++    +++  A LG  ++VPT+DG V   +P GTQ  +   +  KG+P L + N RGDQ V+V +E+PK+L+ +++ L+ E A++S   +  +R
Sbjct:  261 VKPHPLFTRQGNNVVCEVPITFTQAALGAELEVPTLDGKVKYTVPEGTQTGSVFRLKGKGIPYL-RGNGRGDQYVKVNIEVPKKLNDKQKALLREFAEISGDDSHEQR 367          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLL2 (Chaperone protein dnaJ OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.871e-16
Identity = 43/94 (45.74%), Postives = 62/94 (65.96%), Query Frame = -2
Query:  429 PDPVLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEEL 710
            P  + +RDG ++++   +SY D +LGT I VPT+DG V L IP  TQP + L +  +G+  L  S  +GDQLVRV V +PK LS  E++L++EL
Sbjct:  280 PHELFRRDGNDVIFNLALSYPDLVLGTKIDVPTLDGAVKLTIPPATQPESMLRIPGQGIGHLRGSG-KGDQLVRVNVYVPKDLSHHEKELLKEL 372          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_BREBN (Chaperone protein dnaJ OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.871e-16
Identity = 47/96 (48.96%), Postives = 64/96 (66.67%), Query Frame = -2
Query:  408 KRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELADLSKGK 695
            +R+G +I     ++Y  A LG  I+VPTVDG V LKIPAGTQ  T   +  KGVP L + N RGDQ V+V+V  P +LS ++++L+ ELA+LS  K
Sbjct:  259 EREGNDIYCEVPLTYAQAALGDEIEVPTVDGRVKLKIPAGTQTETFFRLRGKGVPHL-RGNGRGDQHVKVRVITPTKLSDKQKELLRELAELSGEK 353          
The following BLAST results are available for this feature:
BLAST of CX301067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 297
Match NameE-valueIdentityDescription
DNAJ_SYNP61.932e-1842.98Chaperone protein dnaJ OS=Synechococcus sp. (strai... [more]
DNAJ_PROMA3.295e-1849.45Chaperone protein dnaJ OS=Prochlorococcus marinus ... [more]
DNAJ_THETN3.643e-1741.67Chaperone protein dnaJ OS=Thermoanaerobacter tengc... [more]
DNAJ_THENN1.384e-1648.42Chaperone protein dnaJ OS=Thermotoga neapolitana (... [more]
DNAJ_CYAP71.808e-1641.74Chaperone protein dnaJ OS=Cyanothece sp. (strain P... [more]
DNAJ_CLOD64.028e-1641.94Chaperone protein dnaJ OS=Clostridium difficile (s... [more]
DNAJ_CHLTE4.028e-1646.81Chaperone protein dnaJ OS=Chlorobium tepidum GN=dn... [more]
DNAJ_CLOCE6.871e-1636.11Chaperone protein dnaJ OS=Clostridium cellulolytic... [more]
DNAJ_CHLL26.871e-1645.74Chaperone protein dnaJ OS=Chlorobium limicola (str... [more]
DNAJ_BREBN6.871e-1648.96Chaperone protein dnaJ OS=Brevibacillus brevis (st... [more]

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Properties
Property NameValue
Genbank descriptionC08005D05SK PhyRootSw1 Citrus sinensis cDNA clone C08005D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301067 ID=CX301067; Name=CX301067; organism=Citrus sinensis; type=EST; length=717bp
GAATTCGGCACGAGGTTTTTTTTTTTTTTTTGCAAAATTAAAGGATGGTA
TTATTGCACAAAATCTAGTCACACTCCAAAAAATAATTAATAGGTAACTT
ATGAAATCAAGTAGAAAACAAAATTAAAGAGGGATGCATCTCCCATTTCA
CCTCCATTAACCATTCTCAAAGATATCTTCTTGTGGTCAAAAGTATAGCA
ATGTAATTTCACCTACTACTACAGAAACTTGCTTACCCCATTTCCTCAGC
TCAGACACACTGAGAACTGTCAAATTCAGAAATCCCCTTATCATAAGCCA
TATAGACTCAGCAATGACCGCCATAGAATGAAGAATGTTTCTTCGGGGTG
AGCAACATAAATTTGATAAACATAAAAAGGCCCAAGCAACTATCTCCTGC
TTGCTGTCTTTCCCTTGCTCAGATCAGCAAGCTCCTCAATAAGTTTTCTC
TCTTCACTGCTCAATCTTTTCGGGATTTCAACTTGGACGCGTACCAACTG
ATCTCCTCTCATGTTGCTTTTATTTAGTACTGGTACCCCTTTCTTTGCCA
TAACAAGTGTTGTGTTCGGCTGGGTCCCAGCTGGGATCTTCAAATCAACC
ATGCCATCCACTGTTGGGACCTTTATGGTAGTCCCCAAAATTGCATCTAT
ATATGACACTTTGCAGGTATATAAAATGTTGGTACCATCACGTTTTAGCA
CAGGGTCTGGGATAACT
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