CX301067

Overview
NameCX301067
Unique NameCX301067
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_MYCMS (Chaperone protein dnaJ OS=Mycoplasma mycoides subsp. mycoides SC GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.691e-11
Identity = 30/87 (34.48%), Postives = 54/87 (62.07%), Query Frame = -2
Query:  429 DGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEEL 689
            +  +IL T  +SY+DAILG  I + T+DG +  K+P     N  +++  KG+      + RGD +++V + +PK L+ +E++LIE++
Sbjct:  272 NNNDILMTYNISYLDAILGNEIIIKTLDGDIKYKLPKSINSNEFIIINNKGLYKSINKDKRGDLIIKVNIVVPKNLNKKEKELIEQI 358          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_METAC (Chaperone protein dnaJ OS=Methanosarcina acetivorans GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.691e-11
Identity = 34/96 (35.42%), Postives = 60/96 (62.50%), Query Frame = -2
Query:  408 KRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELADLSKGK 695
            KR   +++    +++  A LG  + V T+ G V + IPAGTQ ++   +  KG+  L+  + +GDQLVRV ++ P +L+ E+++L+ +  +LSKGK
Sbjct:  261 KRVDYDVISELSITFTQAALGADVMVDTLYGKVKMNIPAGTQTHSVFRLRDKGIQRLH-GHGKGDQLVRVIIKTPTKLNQEQKELLRQFENLSKGK 355          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_ENTS8 (Chaperone protein dnaJ OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.691e-11
Identity = 37/103 (35.92%), Postives = 58/103 (56.31%), Query Frame = -2
Query:  396 PVLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELADLSKGKTASR 704
            P+ +R+G N+     +++  A LG  I+VPT+DG V LK+P+ TQ      M  KGV  + +   +GD L RV VE P  L+  ++ L++EL +   G T  +
Sbjct:  257 PIFEREGNNLYCEVPINFAMAALGGEIEVPTLDGRVMLKVPSETQTGKLFRMRGKGVKSV-RGGAQGDLLCRVVVETPVGLNDRQKALLQELQESFGGPTGEK 358          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLFF (Chaperone protein dnaJ OS=Chlamydophila felis (strain Fe/C-56) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.691e-11
Identity = 36/110 (32.73%), Postives = 62/110 (56.36%), Query Frame = -2
Query:  393 VIPDPVLKRDGTNILYTCKVSYIDAILGTTIKVPTV--DGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELADLSKGKTASRR 716
            V P PV +R G +++    + ++DA LG   ++PT+  +G   L +P G Q  T L +  +G P ++    RGD LVRV VE P+ LS E+++L+ + +   K +   ++
Sbjct:  267 VEPHPVFERRGDDLILELPIGFVDAALGMKKEIPTLLKEGTCRLTVPEGIQSGTILKVKNQGFPNVHGRG-RGDLLVRVSVETPQNLSEEQKELLRKFSSTEKAENFPKK 375          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_BLOPB (Chaperone protein dnaJ OS=Blochmannia pennsylvanicus (strain BPEN) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.691e-11
Identity = 39/103 (37.86%), Postives = 59/103 (57.28%), Query Frame = -2
Query:  396 PVLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELADLSKGKTASR 704
            P+  R+  N+     +S+  A LG  I+VPT+DG V LKIP  TQ      M  KGV  + +S   GD L RV VE P +L+  +++L+++L+D  +G   +R
Sbjct:  253 PIFDREEKNLYCEVPISFSMAALGGEIEVPTLDGRVKLKIPPETQTGKLFRMRGKGVKSV-RSGGNGDLLCRVVVETPVKLNDIQKRLLQDLSDSFEGPHGNR 354          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_ALCBS (Chaperone protein dnaJ OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.691e-11
Identity = 36/94 (38.30%), Postives = 57/94 (60.64%), Query Frame = -2
Query:  423 VLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGV-PVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELAD 701
            + +RDG N+     +S++DA LG  + VPT++G V LK+PA TQ      +  KGV PV  +    GD L +V +E P +LSSE+++L+ +  +
Sbjct:  258 IFQRDGDNLYCEVPISFVDATLGGELDVPTLNGKVKLKVPAETQSGKLFRLRGKGVAPV--RGGAPGDLLCKVVIETPVKLSSEQKELLRKFQE 349          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ2_CORGL (Chaperone protein dnaJ 2 OS=Corynebacterium glutamicum GN=dnaJ2 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.691e-11
Identity = 38/95 (40.00%), Postives = 53/95 (55.79%), Query Frame = -2
Query:  423 DPVLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELAD 707
            D V  RDG+NIL T  VS+ +  LG  I VPT++  V LK+PAGT    TL +  +G+   + +   GD LV VQV +PK L     + +   A+
Sbjct:  286 DDVFTRDGSNILITIPVSFSELALGGAISVPTLNKPVKLKLPAGTPDGRTLRVRGRGIEARDST---GDLLVTVQVSVPKNLDDNAAEALRAYAE 377          
The following BLAST results are available for this feature:
BLAST of CX301067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 297
Match NameE-valueIdentityDescription
DNAJ_MYCMS8.691e-1134.48Chaperone protein dnaJ OS=Mycoplasma mycoides subs... [more]
DNAJ_METAC8.691e-1135.42Chaperone protein dnaJ OS=Methanosarcina acetivora... [more]
DNAJ_ENTS88.691e-1135.92Chaperone protein dnaJ OS=Enterobacter sakazakii (... [more]
DNAJ_CHLFF8.691e-1132.73Chaperone protein dnaJ OS=Chlamydophila felis (str... [more]
DNAJ_BLOPB8.691e-1137.86Chaperone protein dnaJ OS=Blochmannia pennsylvanic... [more]
DNAJ_ALCBS8.691e-1138.30Chaperone protein dnaJ OS=Alcanivorax borkumensis ... [more]
DNAJ2_CORGL8.691e-1140.00Chaperone protein dnaJ 2 OS=Corynebacterium glutam... [more]

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Properties
Property NameValue
Genbank descriptionC08005D05SK PhyRootSw1 Citrus sinensis cDNA clone C08005D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301067 ID=CX301067; Name=CX301067; organism=Citrus sinensis; type=EST; length=717bp
GAATTCGGCACGAGGTTTTTTTTTTTTTTTTGCAAAATTAAAGGATGGTA
TTATTGCACAAAATCTAGTCACACTCCAAAAAATAATTAATAGGTAACTT
ATGAAATCAAGTAGAAAACAAAATTAAAGAGGGATGCATCTCCCATTTCA
CCTCCATTAACCATTCTCAAAGATATCTTCTTGTGGTCAAAAGTATAGCA
ATGTAATTTCACCTACTACTACAGAAACTTGCTTACCCCATTTCCTCAGC
TCAGACACACTGAGAACTGTCAAATTCAGAAATCCCCTTATCATAAGCCA
TATAGACTCAGCAATGACCGCCATAGAATGAAGAATGTTTCTTCGGGGTG
AGCAACATAAATTTGATAAACATAAAAAGGCCCAAGCAACTATCTCCTGC
TTGCTGTCTTTCCCTTGCTCAGATCAGCAAGCTCCTCAATAAGTTTTCTC
TCTTCACTGCTCAATCTTTTCGGGATTTCAACTTGGACGCGTACCAACTG
ATCTCCTCTCATGTTGCTTTTATTTAGTACTGGTACCCCTTTCTTTGCCA
TAACAAGTGTTGTGTTCGGCTGGGTCCCAGCTGGGATCTTCAAATCAACC
ATGCCATCCACTGTTGGGACCTTTATGGTAGTCCCCAAAATTGCATCTAT
ATATGACACTTTGCAGGTATATAAAATGTTGGTACCATCACGTTTTAGCA
CAGGGTCTGGGATAACT
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