CX301067

Overview
NameCX301067
Unique NameCX301067
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_GLOVI (Chaperone protein dnaJ OS=Gloeobacter violaceus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.973e-16
Identity = 41/104 (39.42%), Postives = 68/104 (65.38%), Query Frame = -2
Query:  393 PVLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELADLSKGKTASRR 704
            PV +R+G +I    ++SY+ AILG+ + V TVDG   + +P GTQP T L +  KGVP +     RG+  ++++V IP +L +EER+L+ +LA  ++G+  S++
Sbjct:  266 PVFRREGQDIYSIAEISYLQAILGSQMSVETVDGPQTVVVPPGTQPETVLTLDGKGVPRIGNPTRRGNHYLQLKVVIPTKLGAEERELLTKLAK-ARGEKVSKK 368          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_PEDPA (Chaperone protein dnaJ OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.172e-15
Identity = 43/100 (43.00%), Postives = 64/100 (64.00%), Query Frame = -2
Query:  417 VIPDPVLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELADLS 716
            V P  + +RDG+ I Y   +S++ A LG  I+VPTV G V LK+PAGTQ  T   +  KG P L + N  GDQ V+V+V +PK+L+S +++ +++ A  S
Sbjct:  258 VQPSDMYERDGSEIYYNQTISFVQAALGDEIEVPTVHGKVKLKVPAGTQTGTNFRLKGKGAPRL-RGNGTGDQHVKVKVTVPKKLNSGQKEALKQFAKAS 356          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOPE (Chaperone protein dnaJ OS=Clostridium perfringens GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.531e-15
Identity = 42/94 (44.68%), Postives = 59/94 (62.77%), Query Frame = -2
Query:  435 VIPDPVLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIE 716
            V P  + +R+G++I Y  K+S   A LG  I VPTVDG V  K+PAGTQP T   +  KGVP +N    RG+Q V + VE+PK L+ E+ + ++
Sbjct:  267 VAPSKIFRREGSDIYYDYKISMAKAALGAEITVPTVDGNVKYKVPAGTQPGTKFRLKGKGVPHVNGGG-RGNQYVHMVVEVPKHLNKEQEEALK 359          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_BRECH (Chaperone protein dnaJ OS=Brevibacillus choshinensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.531e-15
Identity = 46/96 (47.92%), Postives = 64/96 (66.67%), Query Frame = -2
Query:  408 KRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELADLSKGK 695
            +R+G +I     ++Y  A LG  I+VPTVDG V LKIP+GTQ  T   +  KGVP L + N RGDQ V+V+V  P +LS ++++L+ ELA+LS  K
Sbjct:  259 EREGNDIYCEVPLTYAQAALGDEIEVPTVDGRVKLKIPSGTQTETFFRLRGKGVPHL-RGNGRGDQHVKVRVITPTKLSDKQKELLRELAELSGEK 353          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_FINM2 (Chaperone protein dnaJ OS=Finegoldia magna (strain ATCC 29328) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.611e-15
Identity = 40/88 (45.45%), Postives = 63/88 (71.59%), Query Frame = -2
Query:  435 KRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEER-KLIE 695
            KR   +I++   ++Y  A+LG+ I+VPT+DG+ + ++P GTQPNTT  +  KGVP LN SN RGD L  V++ +PK+++ E++ KLI+
Sbjct:  260 KRINNDIVFDMPITYAQAVLGSKIEVPTLDGIEEFELPEGTQPNTTFKLKSKGVPYLN-SNSRGDILFTVKIIVPKKINKEQKEKLIK 346          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLCH (Chaperone protein dnaJ OS=Chlorobium chlorochromatii (strain CaD3) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.611e-15
Identity = 41/88 (46.59%), Postives = 61/88 (69.32%), Query Frame = -2
Query:  429 RDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEEL 692
            R+G +++Y   VSY D +LGT ++VPT+DG V L IPAGTQP T L +   G+  L K   RGDQ V+V V +PK +S ++++L+++L
Sbjct:  286 RNGHDVIYNLAVSYPDMVLGTKVEVPTLDGAVKLTIPAGTQPETMLRIQGHGIGHL-KGGGRGDQYVKVNVFVPKEVSHQDKELLKDL 372          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLP8 (Chaperone protein dnaJ OS=Chlorobaculum parvum (strain NCIB 8327) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.410e-15
Identity = 42/94 (44.68%), Postives = 61/94 (64.89%), Query Frame = -2
Query:  429 PDPVLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEEL 710
            P    KR+G +I+Y   V + D +LGT + VPT+DG V L +PAGTQPNT L +  KG+  L K    GD  VRV V +PK +S +++++++EL
Sbjct:  281 PHDQFKRNGDDIIYDLAVGFPDLVLGTKVDVPTLDGHVKLTVPAGTQPNTMLRIGGKGIGHL-KGGGSGDLYVRVNVFVPKDVSGKDKEMLKEL 373          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_ERYRH (Chaperone protein dnaJ OS=Erysipelothrix rhusiopathiae GN=dnaJ PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15
Identity = 44/91 (48.35%), Postives = 60/91 (65.93%), Query Frame = -2
Query:  423 KRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELAD 695
            +R+G +I     +S IDA LGT I+VPTV G V L IPAGTQPNT   + +KGV  L    M GDQ V V++E+P +LS ++R+ +E L +
Sbjct:  264 RREGNDIHINIPLSVIDATLGTEIEVPTVHGDVKLTIPAGTQPNTKFRLREKGVQDLRSGRM-GDQYVEVKLEVPTKLSRQQREHLEALKE 353          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: MDJ1_SCHPO (DnaJ homolog 1, mitochondrial OS=Schizosaccharomyces pombe GN=mdj1 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.816e-15
Identity = 44/103 (42.72%), Postives = 59/103 (57.28%), Query Frame = -2
Query:  396 PVLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELADLSKGKTASR 704
            P   R+GTN+ Y  K+    A LG T++VPT+ G VDL++  GT     + MA KG+  +N S   G+  V  +V IPK LS  ER L+E+LAD     TA R
Sbjct:  360 PFFVREGTNVTYNAKIPMTTAALGGTLRVPTLTGNVDLRVSPGTSTGDRITMAGKGIRKVNTSRY-GNFYVNFEVTIPKILSPHERSLLEQLADALNDSTARR 461          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOTH (Chaperone protein dnaJ OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.596e-15
Identity = 37/99 (37.37%), Postives = 64/99 (64.65%), Query Frame = -2
Query:  420 VIPDPVLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELADL 716
            V P P+ KR G ++     +++  A LG  I+VPT+DG   + IP GTQ  T   +  KG+P L +S+ RGDQ V+V +E+P++L+ ++++++ + A+L
Sbjct:  267 VKPHPIFKRHGNDVNCEIPITFTQAALGAEIEVPTLDGKEKIVIPEGTQTGTVFKLKGKGIPFL-RSSGRGDQYVKVNIEVPRKLNEKQKEVLRQFAEL 364          
The following BLAST results are available for this feature:
BLAST of CX301067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 297
Match NameE-valueIdentityDescription
DNAJ_GLOVI8.973e-1639.42Chaperone protein dnaJ OS=Gloeobacter violaceus GN... [more]
DNAJ_PEDPA1.172e-1543.00Chaperone protein dnaJ OS=Pediococcus pentosaceus ... [more]
DNAJ_CLOPE1.531e-1544.68Chaperone protein dnaJ OS=Clostridium perfringens ... [more]
DNAJ_BRECH1.531e-1547.92Chaperone protein dnaJ OS=Brevibacillus choshinens... [more]
DNAJ_FINM22.611e-1545.45Chaperone protein dnaJ OS=Finegoldia magna (strain... [more]
DNAJ_CHLCH2.611e-1546.59Chaperone protein dnaJ OS=Chlorobium chlorochromat... [more]
DNAJ_CHLP83.410e-1544.68Chaperone protein dnaJ OS=Chlorobaculum parvum (st... [more]
DNAJ_ERYRH4.453e-1548.35Chaperone protein dnaJ OS=Erysipelothrix rhusiopat... [more]
MDJ1_SCHPO5.816e-1542.72DnaJ homolog 1, mitochondrial OS=Schizosaccharomyc... [more]
DNAJ_CLOTH7.596e-1537.37Chaperone protein dnaJ OS=Clostridium thermocellum... [more]

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Properties
Property NameValue
Genbank descriptionC08005D05SK PhyRootSw1 Citrus sinensis cDNA clone C08005D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301067 ID=CX301067; Name=CX301067; organism=Citrus sinensis; type=EST; length=717bp
GAATTCGGCACGAGGTTTTTTTTTTTTTTTTGCAAAATTAAAGGATGGTA
TTATTGCACAAAATCTAGTCACACTCCAAAAAATAATTAATAGGTAACTT
ATGAAATCAAGTAGAAAACAAAATTAAAGAGGGATGCATCTCCCATTTCA
CCTCCATTAACCATTCTCAAAGATATCTTCTTGTGGTCAAAAGTATAGCA
ATGTAATTTCACCTACTACTACAGAAACTTGCTTACCCCATTTCCTCAGC
TCAGACACACTGAGAACTGTCAAATTCAGAAATCCCCTTATCATAAGCCA
TATAGACTCAGCAATGACCGCCATAGAATGAAGAATGTTTCTTCGGGGTG
AGCAACATAAATTTGATAAACATAAAAAGGCCCAAGCAACTATCTCCTGC
TTGCTGTCTTTCCCTTGCTCAGATCAGCAAGCTCCTCAATAAGTTTTCTC
TCTTCACTGCTCAATCTTTTCGGGATTTCAACTTGGACGCGTACCAACTG
ATCTCCTCTCATGTTGCTTTTATTTAGTACTGGTACCCCTTTCTTTGCCA
TAACAAGTGTTGTGTTCGGCTGGGTCCCAGCTGGGATCTTCAAATCAACC
ATGCCATCCACTGTTGGGACCTTTATGGTAGTCCCCAAAATTGCATCTAT
ATATGACACTTTGCAGGTATATAAAATGTTGGTACCATCACGTTTTAGCA
CAGGGTCTGGGATAACT
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