CX301067

Overview
NameCX301067
Unique NameCX301067
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_TETHA (Chaperone protein dnaJ OS=Tetragenococcus halophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.692e-14
Identity = 41/103 (39.81%), Postives = 61/103 (59.22%), Query Frame = -2
Query:  393 VLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELADLSKGKTASRR 701
            +  RDG+ I Y   ++++ A LG  + VPTV G V LKIPAGTQ +T   +  KG P L + N  GDQ V V++  PK L+ E+R+ +   A+L+   T  ++
Sbjct:  271 IFDRDGSEIYYELPINFVQAALGDEVDVPTVHGNVKLKIPAGTQTSTKFRLRGKGAPRL-RGNSTGDQQVTVKIITPKNLNEEQREALRNFAELTGQSTEEQQ 372          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_RHOBA (Chaperone protein dnaJ OS=Rhodopirellula baltica GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.692e-14
Identity = 40/103 (38.83%), Postives = 63/103 (61.17%), Query Frame = -2
Query:  393 VLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELADLSKGKTASRR 701
            + KR+G +++    +SY  A LG TI VPT+DG  +L +PAGTQ      +  +G+ V  +S   GD LV++ +E+PK+LS +++KL+ ELA+L        R
Sbjct:  261 LFKREGQHLILQMPISYAQAALGATINVPTLDGPHELTVPAGTQTGHVFTVRGQGI-VDPRSGRTGDLLVQIFIEVPKKLSDKQQKLLRELAELDHDSVLPER 362          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLPD (Chaperone protein dnaJ OS=Chlorobium phaeobacteroides (strain DSM 266) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.692e-14
Identity = 42/98 (42.86%), Postives = 61/98 (62.24%), Query Frame = -2
Query:  417 PDPVLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELADLS 710
            P    +R+G +++Y   + + D +LGT + VPT+DG V L IP  TQP T L +   G+  L  S  RGDQ VRV V +PK +SS +R+L++EL + S
Sbjct:  275 PHEKFQRNGDDVIYHLALGFPDLVLGTKVDVPTLDGSVKLTIPPSTQPETMLRIPGHGIGHLRGSG-RGDQYVRVNVFVPKEVSSHDRELLKELKNSS 371          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_STRA3 (Chaperone protein dnaJ OS=Streptococcus agalactiae serotype III GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.210e-14
Identity = 40/103 (38.83%), Postives = 61/103 (59.22%), Query Frame = -2
Query:  408 VIPDPVLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELADLSKGK 716
            V+P    +R+G+ I YT K+S++ A LG TI +PTV G V++ IPAGTQ   T  +  KG P L +   +GDQ V V +  P +L+  +++ +   A+ S  K
Sbjct:  258 VLPSQQFERNGSTIYYTLKISFVQAALGDTIDIPTVHGAVEMSIPAGTQTGKTFRLRGKGAPKL-RGGGQGDQHVTVNIVTPTKLNDAQKEALHAFAEASGDK 359          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_PROA2 (Chaperone protein dnaJ OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.210e-14
Identity = 38/91 (41.76%), Postives = 61/91 (67.03%), Query Frame = -2
Query:  429 VLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEEL 701
            +  R G +++Y   +SY D +LGT + +PT++G V + +P  TQPNT L ++ KG+  L K+  RGD LVRV V +PK  S ++++L++EL
Sbjct:  279 IFARRGDDVVYNLTLSYADMVLGTKVDIPTLEGRVKMTVPPATQPNTVLRISAKGIGHL-KAPGRGDHLVRVNVFVPKDPSHQDKELLKEL 368          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_LISW6 (Chaperone protein dnaJ OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.210e-14
Identity = 42/97 (43.30%), Postives = 61/97 (62.89%), Query Frame = -2
Query:  426 VIPDPVLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELA 716
            VIPD   +R+  +I     ++++ A LG  I VPTV G V LKIP+GTQ  TT  +  KGVP L + N  GDQ V V+V +PK+L  ++++++ E A
Sbjct:  256 VIPDEFFEREADDIYVEVPITFVQATLGDEIDVPTVHGKVRLKIPSGTQTGTTFRLRGKGVPHL-RGNGTGDQHVIVKVIVPKKLDDKQKEILREFA 351          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_DICT6 (Chaperone protein dnaJ OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.210e-14
Identity = 36/99 (36.36%), Postives = 60/99 (60.61%), Query Frame = -2
Query:  420 VIPDPVLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELADL 716
            +IP  + KRD  +I     + Y+ A+LG  ++VPT++G   + I  GTQ    + +  KG+P L   N RGDQ + V++ +P+ LS +E++L+ E+A L
Sbjct:  269 IIPHKIFKRDNEDIWMELPIDYLIALLGGEVEVPTLEGKEKIYIKPGTQTGEVITLKGKGIPYLRNKNQRGDQKIVVKITVPQNLSPKEKELLLEIAKL 367          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_HALOH (Chaperone protein dnaJ OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.887e-14
Identity = 37/100 (37.00%), Postives = 64/100 (64.00%), Query Frame = -2
Query:  417 VIPDPVLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELADLS 716
            V P  + +R   +I     +S++ A LG  I+VPT++G V   IP GTQP+T   +  KG+P LN    RGD+ ++V+V IP++++ E+++L+ + A++S
Sbjct:  255 VEPHDIFERKDDDIYCEVPISFVQAALGDKIEVPTLEGKVKFTIPEGTQPDTVFRLKNKGIPHLN-GRGRGDEFIKVRVVIPEKMNDEQKELLRKFAEIS 353          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOTE (Chaperone protein dnaJ OS=Clostridium tetani GN=dnaJ PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.887e-14
Identity = 41/93 (44.09%), Postives = 58/93 (62.37%), Query Frame = -2
Query:  438 VIPDPVLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLI 716
            V+PDP  KR G +I     +S+  A LGT +KV T+DG V   IP+GTQP T   +  KGVP +N    RGDQ V + V+IPK L+ ++++ +
Sbjct:  257 VMPDPFFKRRGDDIYIDQHISFAKASLGTELKVKTIDGEVKYDIPSGTQPGTVFRLKGKGVPHVN-GRGRGDQYVNIIVDIPKSLNQKQKEAL 348          
BLAST of CX301067 vs. ExPASy Swiss-Prot
Match: DNAJ_LACCB (Chaperone protein dnaJ OS=Lactobacillus casei (strain BL23) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.431e-14
Identity = 43/100 (43.00%), Postives = 59/100 (59.00%), Query Frame = -2
Query:  417 VIPDPVLKRDGTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRLSSEERKLIEELADLS 716
            V P    +RDG+ I  T  +S+  A LG  IKV TV G V+LKIPAGTQ  T   +  KG P L + N  GDQ+V V+V+ PK L+ +++  + + A  S
Sbjct:  266 VAPSKKYQRDGSEIYLTIPLSFAQAALGDEIKVDTVHGAVELKIPAGTQSQTKFRLRGKGAPRL-RGNGTGDQIVTVEVQTPKHLNEKQKSALMQFAAAS 364          
The following BLAST results are available for this feature:
BLAST of CX301067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 297
Match NameE-valueIdentityDescription
DNAJ_TETHA1.692e-1439.81Chaperone protein dnaJ OS=Tetragenococcus halophil... [more]
DNAJ_RHOBA1.692e-1438.83Chaperone protein dnaJ OS=Rhodopirellula baltica G... [more]
DNAJ_CHLPD1.692e-1442.86Chaperone protein dnaJ OS=Chlorobium phaeobacteroi... [more]
DNAJ_STRA32.210e-1438.83Chaperone protein dnaJ OS=Streptococcus agalactiae... [more]
DNAJ_PROA22.210e-1441.76Chaperone protein dnaJ OS=Prosthecochloris aestuar... [more]
DNAJ_LISW62.210e-1443.30Chaperone protein dnaJ OS=Listeria welshimeri sero... [more]
DNAJ_DICT62.210e-1436.36Chaperone protein dnaJ OS=Dictyoglomus thermophilu... [more]
DNAJ_HALOH2.887e-1437.00Chaperone protein dnaJ OS=Halothermothrix orenii (... [more]
DNAJ_CLOTE2.887e-1444.09Chaperone protein dnaJ OS=Clostridium tetani GN=dn... [more]
DNAJ_LACCB6.431e-1443.00Chaperone protein dnaJ OS=Lactobacillus casei (str... [more]

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Properties
Property NameValue
Genbank descriptionC08005D05SK PhyRootSw1 Citrus sinensis cDNA clone C08005D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301067 ID=CX301067; Name=CX301067; organism=Citrus sinensis; type=EST; length=717bp
GAATTCGGCACGAGGTTTTTTTTTTTTTTTTGCAAAATTAAAGGATGGTA
TTATTGCACAAAATCTAGTCACACTCCAAAAAATAATTAATAGGTAACTT
ATGAAATCAAGTAGAAAACAAAATTAAAGAGGGATGCATCTCCCATTTCA
CCTCCATTAACCATTCTCAAAGATATCTTCTTGTGGTCAAAAGTATAGCA
ATGTAATTTCACCTACTACTACAGAAACTTGCTTACCCCATTTCCTCAGC
TCAGACACACTGAGAACTGTCAAATTCAGAAATCCCCTTATCATAAGCCA
TATAGACTCAGCAATGACCGCCATAGAATGAAGAATGTTTCTTCGGGGTG
AGCAACATAAATTTGATAAACATAAAAAGGCCCAAGCAACTATCTCCTGC
TTGCTGTCTTTCCCTTGCTCAGATCAGCAAGCTCCTCAATAAGTTTTCTC
TCTTCACTGCTCAATCTTTTCGGGATTTCAACTTGGACGCGTACCAACTG
ATCTCCTCTCATGTTGCTTTTATTTAGTACTGGTACCCCTTTCTTTGCCA
TAACAAGTGTTGTGTTCGGCTGGGTCCCAGCTGGGATCTTCAAATCAACC
ATGCCATCCACTGTTGGGACCTTTATGGTAGTCCCCAAAATTGCATCTAT
ATATGACACTTTGCAGGTATATAAAATGTTGGTACCATCACGTTTTAGCA
CAGGGTCTGGGATAACT
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