CX301066
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301066 vs. ExPASy Swiss-Prot
Match: RS21_SCHPO (40S ribosomal protein S21 OS=Schizosaccharomyces pombe GN=rps21 PE=1 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 1.054e-16 Identity = 39/77 (50.65%), Postives = 56/77 (72.73%), Query Frame = 1 Query: 91 NDKGELVDLYIPRKCAATNKIIHAKDKSSVQLNIAEVDEETGRATGKKIIYGLSGFVRSIGRANAEVENLLARDGVM 321 N+ G+LVDLY+PRKC+ATN+II AKD +SVQ+N+ VD E + G+K Y +SGFVRS G ++ + L +DG++ Sbjct: 3 NEAGQLVDLYVPRKCSATNRIIQAKDHASVQINVCAVDAEGRQIPGEKTTYAISGFVRSKGESDDCINRLTTQDGLL 79
BLAST of CX301066 vs. ExPASy Swiss-Prot
Match: RS21_MOUSE (40S ribosomal protein S21 OS=Mus musculus GN=Rps21 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.054e-16 Identity = 38/77 (49.35%), Postives = 55/77 (71.43%), Query Frame = 1 Query: 91 NDKGELVDLYIPRKCAATNKIIHAKDKSSVQLNIAEVDEETGRATGKKIIYGLSGFVRSIGRANAEVENLLARDGVM 321 ND GE VDLY+PRKC+A+N+II AKD +S+Q+N+AEVD TGR G+ YG+ G +R +G ++ + L DG++ Sbjct: 3 NDAGEFVDLYVPRKCSASNRIIAAKDHASIQMNVAEVDRTTGRFNGQFKTYGICGAIRRMGESDDSILRLAKADGIV 79
BLAST of CX301066 vs. ExPASy Swiss-Prot
Match: RS21_CANGA (40S ribosomal protein S21 OS=Candida glabrata GN=RPS21 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.377e-16 Identity = 42/77 (54.55%), Postives = 56/77 (72.73%), Query Frame = 1 Query: 91 NDKGELVDLYIPRKCAATNKIIHAKDKSSVQLNIAEVDEETGRATGKKIIYGLSGFVRSIGRANAEVENLLARDGVM 321 NDKG+LV+LYIPRKC+ATN+II A D +SVQ+NIA+VDEE G+ I Y LSG VR+ G ++ + L DG++ Sbjct: 3 NDKGQLVELYIPRKCSATNRIIKADDHASVQINIAKVDEEGRAIPGEYITYALSGNVRARGESDDSLNRLAQNDGLL 79
BLAST of CX301066 vs. ExPASy Swiss-Prot
Match: RS21_BRABE (40S ribosomal protein S21 OS=Branchiostoma belcheri GN=RPS21 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.377e-16 Identity = 38/77 (49.35%), Postives = 57/77 (74.03%), Query Frame = 1 Query: 91 NDKGELVDLYIPRKCAATNKIIHAKDKSSVQLNIAEVDEETGRATGKKIIYGLSGFVRSIGRANAEVENLLARDGVM 321 ND GE+VDLYIPRKC++TN+II AKD +S+Q+N AEVD TGR TG+ Y + G++R +G ++ ++ L +D ++ Sbjct: 3 NDAGEVVDLYIPRKCSSTNRIIGAKDHASIQINFAEVDPTTGRMTGQYKTYAICGYIRQMGESDDCLKRLAIKDKII 79
BLAST of CX301066 vs. ExPASy Swiss-Prot
Match: RS21_ASPFU (40S ribosomal protein S21 OS=Aspergillus fumigatus GN=rps21 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.798e-16 Identity = 41/75 (54.67%), Postives = 56/75 (74.67%), Query Frame = 1 Query: 91 NDKGELVDLYIPRKCAATNKIIHAKDKSSVQLNIAEVDEETGRATGKKIIYGLSGFVRSIGRANAEVENLLARDG 315 N+KGE+VDLY+PRKC+ATN+II A D +SVQ++IA+VD E GR TG+ Y L GF+R+ G ++ + L RDG Sbjct: 3 NEKGEIVDLYVPRKCSATNRIIKANDHASVQISIAKVD-ENGRYTGENQSYALCGFIRARGESDDSLNRLCQRDG 76
BLAST of CX301066 vs. ExPASy Swiss-Prot
Match: RS21_BIPLU (40S ribosomal protein S21 OS=Biphyllus lunatus GN=RpS21 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.349e-16 Identity = 39/77 (50.65%), Postives = 54/77 (70.13%), Query Frame = 1 Query: 91 NDKGELVDLYIPRKCAATNKIIHAKDKSSVQLNIAEVDEETGRATGKKIIYGLSGFVRSIGRANAEVENLLARDGVM 321 ND GE VDLY PRKC+A+N+IIHAKD +S+QL +AEVD +TGR T Y L G +R +G ++ + L +DG++ Sbjct: 3 NDAGEFVDLYCPRKCSASNRIIHAKDHASIQLCVAEVDPQTGRMTDSTKSYALCGAIRRMGESDDCIVRLTKKDGIL 79
BLAST of CX301066 vs. ExPASy Swiss-Prot
Match: RS21_PIG (40S ribosomal protein S21 OS=Sus scrofa GN=RPS21 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 5.232e-16 Identity = 37/77 (48.05%), Postives = 55/77 (71.43%), Query Frame = 1 Query: 91 NDKGELVDLYIPRKCAATNKIIHAKDKSSVQLNIAEVDEETGRATGKKIIYGLSGFVRSIGRANAEVENLLARDGVM 321 ND GE VDLY+PRKC+A+N+II AKD +S+Q+N+AEVD+ TGR G+ Y + G +R +G ++ + L DG++ Sbjct: 3 NDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRLAKADGIV 79
BLAST of CX301066 vs. ExPASy Swiss-Prot
Match: RS21_HUMAN (40S ribosomal protein S21 OS=Homo sapiens GN=RPS21 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 5.232e-16 Identity = 37/77 (48.05%), Postives = 55/77 (71.43%), Query Frame = 1 Query: 91 NDKGELVDLYIPRKCAATNKIIHAKDKSSVQLNIAEVDEETGRATGKKIIYGLSGFVRSIGRANAEVENLLARDGVM 321 ND GE VDLY+PRKC+A+N+II AKD +S+Q+N+AEVD+ TGR G+ Y + G +R +G ++ + L DG++ Sbjct: 3 NDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRLAKADGIV 79
BLAST of CX301066 vs. ExPASy Swiss-Prot
Match: RS21_CERCA (40S ribosomal protein S21 OS=Ceratitis capitata GN=RpS21 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 5.232e-16 Identity = 40/77 (51.95%), Postives = 54/77 (70.13%), Query Frame = 1 Query: 91 NDKGELVDLYIPRKCAATNKIIHAKDKSSVQLNIAEVDEETGRATGKKIIYGLSGFVRSIGRANAEVENLLARDGVM 321 ND GE VDLY PRKC+A+N+IIHAKD +SVQLNI +VD ETGR T Y + G +R +G ++ + L +DG++ Sbjct: 3 NDAGESVDLYCPRKCSASNRIIHAKDHASVQLNIVDVDPETGRMTVGSKTYAICGEIRRMGESDDCIVRLAKKDGLI 79
BLAST of CX301066 vs. ExPASy Swiss-Prot
Match: RS21_BOVIN (40S ribosomal protein S21 OS=Bos taurus GN=RPS21 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 5.232e-16 Identity = 37/77 (48.05%), Postives = 55/77 (71.43%), Query Frame = 1 Query: 91 NDKGELVDLYIPRKCAATNKIIHAKDKSSVQLNIAEVDEETGRATGKKIIYGLSGFVRSIGRANAEVENLLARDGVM 321 ND GE VDLY+PRKC+A+N+II AKD +S+Q+N+AEVD+ TGR G+ Y + G +R +G ++ + L DG++ Sbjct: 3 NDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRLAKADGIV 79 The following BLAST results are available for this feature:
BLAST of CX301066 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX301066 ID=CX301066; Name=CX301066; organism=Citrus sinensis; type=EST; length=487bpback to top |